prot_S-ischiensis_contig84.20099.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20099.1
Unique Nameprot_S-ischiensis_contig84.20099.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length172
Homology
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BLAST of mRNA_S-ischiensis_contig84.20099.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 222 bits (565), Expect = 7.180e-64
Identity = 108/175 (61.71%), Postives = 134/175 (76.57%), Query Frame = 0 
Query:    1 GEGA---LRWREVTEEPFDMVLLVDAGPALGRPRTLIALPEYGAAEQEAGVQGQARXXXXXXXRPPGLYIRPTMGQYYLLLSVYFDNYCELDCFFGPLAPGESPW-PAAPVAENWPGYGTPEMLRRVVARPESWHFAVSVPVLEAGVSIETRYFPQRPRSIWMAQTP--PPGGAP 169
            GEG    LRWRE+TE+PFD++LLVD G  LG  R L+ +PEYG  E+E   +G+ R       +P GLYI PTM +YYLLLSVYFDNYCELDCF+GP  PGESP  PAAPVAE+WP YGTP M++RV+ RPE W+F++S+P+LEA +S++TRYFP+RP S+WMAQTP  PPG  P
Sbjct: 2778 GEGQQQLLRWREITEQPFDLMLLVDTGKELGHSRILLTMPEYGV-EEEDRARGEGR-------KPGGLYICPTMAEYYLLLSVYFDNYCELDCFYGPPGPGESPGGPAAPVAEDWPPYGTPAMVQRVLTRPEKWNFSISIPLLEASLSMDTRYFPERPASMWMAQTPQNPPGSEP 2944
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BLAST of mRNA_S-ischiensis_contig84.20099.1 vs. uniprot
Match: A0A6H5KKF1_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF1_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.600e-52
Identity = 91/152 (59.87%), Postives = 116/152 (76.32%), Query Frame = 0 
Query:    1 GEGA---LRWREVTEEPFDMVLLVDAGPALGRPRTLIALPEYGAAEQEAGVQGQARXXXXXXXRPPGLYIRPTMGQYYLLLSVYFDNYCELDCFFGPLAPGESPW-PAAPVAENWPGYGTPEMLRRVVARPESWHFAVSVPVLEAGVSIETR 148
            GEG    LRWRE+T++PFD++LLVD G  LG  R L+ +PEYG  E+E   +G+ R       +P GLYI PTM +YYLLLSVYFDNYCELDCF+GP  PGESP  PAAPVAE+WP YGTP M++RV+ RPE W+F++S+P+LEA +S++TR
Sbjct: 2812 GEGQQQLLRWREITQQPFDLMLLVDTGKELGHSRILLTMPEYGV-EEEDRARGEGR-------KPGGLYICPTMAEYYLLLSVYFDNYCELDCFYGPPGPGESPGGPAAPVAEDWPPYGTPAMVQRVLTRPEKWNFSISIPLLEASLSMDTR 2955
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI7.180e-6461.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKF1_9PHAE2.600e-5259.87VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:659812..660327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20099.1mRNA_S-ischiensis_contig84.20099.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 659812..660329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20099.1 ID=prot_S-ischiensis_contig84.20099.1|Name=mRNA_S-ischiensis_contig84.20099.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=172bp
GEGALRWREVTEEPFDMVLLVDAGPALGRPRTLIALPEYGAAEQEAGVQG
QARGQGQGQGRPPGLYIRPTMGQYYLLLSVYFDNYCELDCFFGPLAPGES
PWPAAPVAENWPGYGTPEMLRRVVARPESWHFAVSVPVLEAGVSIETRYF
PQRPRSIWMAQTPPPGGAPNHH
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