prot_S-ischiensis_contig84.20085.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20085.1
Unique Nameprot_S-ischiensis_contig84.20085.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length162
Homology
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BLAST of mRNA_S-ischiensis_contig84.20085.1 vs. uniprot
Match: A0A6H5JQ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ30_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 9.140e-14
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   29 GNMLEQAMPFLTLFWLNLGLCVAGATTHGHIIKAGWTYVALRACYPV 75
            GN+LEQAMPFLTLFWLN+GL   GAT+H  +  AGW YV  RA YPV
Sbjct:   76 GNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPV 122
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BLAST of mRNA_S-ischiensis_contig84.20085.1 vs. uniprot
Match: D7FJ72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ72_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 8.200e-13
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0 
Query:   29 GNMLEQAMPFLTLFWLNLGLCVAGATTHGHIIKAGWTYVALRACYPV 75
            GN+LEQAMPFLTLFWLN+GL   GAT+H  +  AGW YV  RA YPV
Sbjct:  184 GNLLEQAMPFLTLFWLNIGLAALGATSHTGVAIAGWIYVVFRALYPV 230
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQ30_9PHAE9.140e-1468.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ72_ECTSI8.200e-1368.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 38..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:599336..599821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20085.1mRNA_S-ischiensis_contig84.20085.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 599336..600437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20085.1 ID=prot_S-ischiensis_contig84.20085.1|Name=mRNA_S-ischiensis_contig84.20085.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=162bp
MTCGTCTQTLNSRSDRSVPPPGFSPCAPGNMLEQAMPFLTLFWLNLGLCV
AGATTHGHIIKAGWTYVALRACYPVNHTVAAHALWRCGHEPRACSFVLVP
ASSPPVRLPALLCRWSSRPNLAHRHANATVHTSCACGACSAVMPASWPPQ
HCLIVWRLSHEP
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