prot_S-ischiensis_contig84.20045.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20045.1
Unique Nameprot_S-ischiensis_contig84.20045.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length340
Homology
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BLAST of mRNA_S-ischiensis_contig84.20045.1 vs. uniprot
Match: D8LQ12_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 8.480e-14
Identity = 131/203 (64.53%), Postives = 144/203 (70.94%), Query Frame = 0 
Query:   76 AEAPFRVVLHHAVITGNLAAVRSALGGGASIKERDDLRHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLACTRSGAWAALRRVIELLVSHGGDSALSATDELGQTPLHVAASCGGVGATCLLLALGADPFARDGKGRAPGHAFQRTVPTDARRQVAEALRAA 278
            A++PFRVVL  AV+  +L A R+AL  GA   ERDDL HS        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LA T++      R++ ELL    G SAL A DEL QTPLHVAASCG  GA  +LL L ADP A D KGR  G +F R V   AR  +  +L AA
Sbjct:  132 ADSPFRVVLQKAVVESDLDAARAALRSGADPNERDDLCHSSLHFAAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASTQACEKDTFRQMAELL----GPSALLARDELQQTPLHVAASCGNRGAVSVLLELNADPEATDRKGRVAGQSFLRQVTRRARADIRASLAAA 330
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ12_ECTSI8.480e-1464.53Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ12... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..291
NoneNo IPR availablePFAMPF13857Ank_5coord: 203..255
e-value: 3.7E-8
score: 33.5
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 148..289
coord: 81..152
NoneNo IPR availablePANTHERPTHR24193ANKYRIN REPEAT PROTEINcoord: 148..289
coord: 81..152
coord: 129..189
NoneNo IPR availablePANTHERPTHR24193:SF116ADA2A-CONTAINING COMPLEX COMPONENT 3, ISOFORM Dcoord: 129..189
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 145..174
e-value: 0.019
score: 24.2
coord: 178..212
e-value: 30.0
score: 13.5
coord: 112..141
e-value: 0.0055
score: 25.9
coord: 79..108
e-value: 420.0
score: 7.8
coord: 218..247
e-value: 0.22
score: 20.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 218..250
score: 10.873
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 112..144
score: 11.434
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 145..177
score: 11.06
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 58..191
e-value: 5.4E-30
score: 106.1
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 192..294
e-value: 6.7E-13
score: 50.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 78..257
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 84..175
e-value: 1.8E-11
score: 44.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 84..257
score: 41.805

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:112305..113509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20045.1mRNA_S-ischiensis_contig84.20045.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 112140..114264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20045.1 ID=prot_S-ischiensis_contig84.20045.1|Name=mRNA_S-ischiensis_contig84.20045.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=340bp
MCDVAMPQAVEKPGTGAAPMQQLQLPPVIDKEGLDDPTTRAVRCLQSLSL
ECQIELGEIISSSPSHAKRRSWQPAAEAPFRVVLHHAVITGNLAAVRSAL
GGGASIKERDDLRHSVLHFAVANRDVRMVRELLSQGANVNVANKAGWSPL
HYSVLGCDPDIVQALLEHGAYPSYRDNCLITPLHLACTRSGAWAALRRVI
ELLVSHGGDSALSATDELGQTPLHVAASCGGVGATCLLLALGADPFARDG
KGRAPGHAFQRTVPTDARRQVAEALRAAAQLTDAARQLETEGLPPAEQVS
RLLESLQRQSKVPAWAREGSLGGGGGGGAMAWMAPAGRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom