prot_S-ischiensis_contig83.20020.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig83.20020.1
Unique Name	prot_S-ischiensis_contig83.20020.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	168

Homology

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 2.680e-35
Identity = 66/106 (62.26%), Postives = 80/106 (75.47%), Query Frame = 0

Query:   27 ARRTALRLRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            ARRT  RL RC++VLNRLCC+ D++ FLE VD A VPGY   + RP  MR    RL  G Y++E AFA+DVRLAW+NAK +N EGS+LW AAD L+REFEALFC+W
Sbjct:  543 ARRTVFRLVRCKSVLNRLCCNEDVIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKRGGYVNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEW 648

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A6H5KEY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.070e-35
Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 0

Query:   27 ARRTALRLRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            ARRT  RL RC++VLNRLCC+ D + FLE VD A VPGY   + RP  MR    RL  G YL+E AFA+DVRLAW+NAK +N EGS+LW AAD L+REFEALFC+W
Sbjct:  567 ARRTVFRLVRCKSVLNRLCCNEDAIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKRGGYLNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEW 672

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A836CNY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNY5_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.830e-33
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 0

Query:   26 AARRTALRLRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDWYE------VGPSPSRPPAPR 146
            +AR +A RLRRC+AVLN +CCHADI PFLE VD A  P YA VV RP  MR    RL  G Y++E +FAAD+RLA+ANA++YN EGS+LWRAA  + R+FE +F  W        V  S   P APR
Sbjct:  571 SARLSANRLRRCKAVLNAVCCHADINPFLEAVDPAEAPDYALVVRRPVYMRLVDERLKAGMYVNEFSFAADMRLAFANAQRYNAEGSELWRAAAAIARDFERMFLQWVVAPADAGVDASSGEPRAPR 697

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A7S1BCL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCL4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.360e-16
Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:   33 RLRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            +LRRC AVL+R+C   + +PFL+P+D   V  YA ++ RP C+RD   +L  G Y +  AFA DVRL + N + +N  GS+L + A  L   F+  FC W
Sbjct:  212 KLRRCVAVLHRICVLPECMPFLDPIDLNGVDDYAEMIRRPICIRDVREKLDRGDYETVFAFANDVRLIFTNCQVFNPPGSELNQWATLLHSVFDKYFCHW 311

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A3R6VP11_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6VP11_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.590e-13
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 0

Query:   34 LRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHA----FAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            + RCR +L RL       PFL PV+ +  PGY  V+  P       GRL    Y S       FA+D+RL +AN K++N EGS +   AD L ++FE +F +W
Sbjct:  217 MERCRGILRRLMAEPSAEPFLHPVNLSDAPGYLDVIYNPIDFGTILGRLKKEAYYSGPIAVALFASDMRLVFANCKEFNAEGSDIVVTADHLAKDFEKMFYEW 319

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: W4GEM0_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GEM0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.750e-13
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 0

Query:   34 LRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHA----FAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            + RCR +L RL       PFL PV+ +  PGY  V+  P       GRL    Y S       FA+D+RL +AN K++N EGS +   AD L ++FE +F +W
Sbjct:  217 MERCRGILRRLMAEPSAEPFLHPVNLSDAPGYLDVIYNPIDFGTILGRLKKEVYYSGPIAVALFASDMRLVFANCKEFNAEGSDIVVTADHLAKDFEKMFYEW 319

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A6G0WQ84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ84_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.080e-13
Identity = 39/103 (37.86%), Postives = 57/103 (55.34%), Query Frame = 0

Query:   34 LRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWY----LSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            + RC  ++ RL       PFL PVD + VP Y  V+  P        RL    Y    ++   FA+DVRL +AN K++N EGS++  AAD L+++FE +F +W
Sbjct:  216 MERCMGIVRRLMSEPSAEPFLHPVDVSEVPDYLDVIYNPIDFGTILTRLTKANYYTGPIAIALFASDVRLVFANCKEFNAEGSEISSAADQLSKDFERMFYEW 318

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A397A626_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397A626_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.290e-12
Identity = 40/114 (35.09%), Postives = 56/114 (49.12%), Query Frame = 0

Query:   34 LRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHA---------------FAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            + RCR +L RL       PFL PV+ +  PGY  V+  P       GRL    Y S +                FA+D+RL +AN K++N EGS +   AD L ++FE +F +W
Sbjct:  217 MERCRGILRRLMAEPSAEPFLHPVNLSDAPGYLDVIYNPIDFGTILGRLKKEVYYSANIIHNICFVLGPIAVALFASDMRLVFANCKEFNAEGSDIVVTADHLAKDFEKMFYEW 330

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A7S2LNH2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LNH2_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.380e-12
Identity = 43/101 (42.57%), Postives = 53/101 (52.48%), Query Frame = 0

Query:   34 LRRCRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAG--GWYLSEHAFAADVRLAWANAKQYNLEGSQLWRAADGLTREFEALFCDW 132
            +RRC AVL+RLC       FLEPVDT     Y  VV  P  +R    +LA    W   E  FA DVR  W N K YN  G+ +W  AD +++ FE L+  W
Sbjct:  420 IRRCYAVLDRLCKDKMADIFLEPVDTDEFDDYLDVVDFPMDLRTVREKLASVKNWQGPE-VFARDVRKVWNNCKIYNAHGTAIWHVADYMSKLFERLYHAW 519

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BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Match: A0A8B8IFV3_9NEOP (bromodomain and WD repeat-containing protein 1-like n=1 Tax=Vanessa tameamea TaxID=334116 RepID=A0A8B8IFV3_9NEOP)

HSP 1 Score: 73.9 bits (180), Expect = 3.030e-12
Identity = 42/94 (44.68%), Postives = 55/94 (58.51%), Query Frame = 0

Query:   37 CRAVLNRLCCHADIVPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLAWANAKQYNL-EGSQLWRAADGLTREFEALF 129
            C A+L  LC  AD  PF EPV +A VP Y AVV+RP  +     RLA G Y      AADVRL +AN++ YN  + S+++     L+  FEAL+
Sbjct:  544 CAALLRELCASADAEPFREPVSSAQVPDYFAVVSRPMDLGTVRRRLACGRYARAAQLAADVRLVFANSRLYNTNKRSRIYSMTVRLSSLFEALW 637

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig83.20020.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LBK0_ECTSI	2.680e-35	62.26	Bromodomain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5KEY2_9PHAE	3.070e-35	63.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CNY5_9STRA	3.830e-33	55.12	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1BCL4_9STRA	1.360e-16	43.00	Hypothetical protein (Fragment) n=1 Tax=Corethron ...	[more]
A0A3R6VP11_9STRA	2.590e-13	38.83	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
W4GEM0_9STRA	2.750e-13	38.83	Uncharacterized protein n=8 Tax=Aphanomyces astaci...	[more]
A0A6G0WQ84_9STRA	5.080e-13	37.86	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A397A626_9STRA	2.290e-12	35.09	Uncharacterized protein (Fragment) n=4 Tax=Aphanom...	[more]
A0A7S2LNH2_9STRA	2.380e-12	42.57	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]
A0A8B8IFV3_9NEOP	3.030e-12	44.68	bromodomain and WD repeat-containing protein 1-lik...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 62..78 score: 23.27 coord: 96..115 score: 36.41 coord: 78..96 score: 22.88 coord: 48..61 score: 33.85
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 26..134 e-value: 3.5E-7 score: 39.9
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 37..119 e-value: 1.6E-14 score: 53.7
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 52..115 score: 12.457
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 12..136 e-value: 1.0E-22 score: 82.3
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 21..135
None	No IPR available	PANTHER	PTHR45926	FAMILY NOT NAMED	coord: 26..161
None	No IPR available	PANTHER	PTHR45926:SF2		coord: 26..161

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig83	contig	S-ischiensis_contig83:519778..521225 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig83.20020.1	mRNA_S-ischiensis_contig83.20020.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig83 519778..521225 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig83.20020.1 ID=prot_S-ischiensis_contig83.20020.1|Name=mRNA_S-ischiensis_contig83.20020.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=168bp
SGTGGGGGGGRSRSRSRSRGGGGGGAARRTALRLRRCRAVLNRLCCHADI
VPFLEPVDTATVPGYAAVVARPCCMRDTHGRLAGGWYLSEHAFAADVRLA
WANAKQYNLEGSQLWRAADGLTREFEALFCDWYEVGPSPSRPPAPRPPPT
APPPPPPRPPPAATVSPV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001487	Bromodomain
IPR036427	Bromodomain-like_sf