prot_S-ischiensis_contig83.20018.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.20018.1
Unique Nameprot_S-ischiensis_contig83.20018.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length359
Homology
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: D8LBK0_ECTSI (Bromodomain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 2.200e-59
Identity = 113/237 (47.68%), Postives = 155/237 (65.40%), Query Frame = 0
Query:   94 VERVLMAWDFLCELRELVGFVDGPFQRMLVAMEGPRPGEAAVPRAGQVMLDEGGVLLTKVLLLELQRGLLEGDMRPAEVQNALALRPLNALTWPEVAADVLCALSVRRAYPGLAPPALAAMVTSRPPQWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLDPE 330
            VE+ LMAWDFL   R+LVG V  P +RM+ A+  P     A+P   ++   E  +LLTK+LL+E+ R +L   M    V + LA RP+N LTWPEVA D L AL+  RA+P +    +AA+++ RP  WLARC D++++++  PL   F+R VDPA VPGY+ +V+ PMDL TVR RLW       Y  H  +  D+RLVWSNAK+FN E+++ W+AAD L+   ESLY++WVL PE
Sbjct:  960 VEQALMAWDFLSSTRDLVGMVLPPTKRMIHALTPPTGKAVAIPTPSELAFSEACMLLTKILLVEV-RDVLRRHMSKKLVDDVLAQRPVNLLTWPEVAGDALVALANHRAHPEMRTSEMAALLSVRPSGWLARCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDLSTVRRRLWSRR----YQWHQEVVDDLRLVWSNAKVFNQENTDFWHAADSLALLTESLYESWVLQPE 1191          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A6H5KKJ2_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 3.390e-38
Identity = 91/235 (38.72%), Postives = 128/235 (54.47%), Query Frame = 0
Query:   99 MAWDFLCELRELVGFVDGPFQRMLVAMEGPRPGEAAVPRAGQVMLDEGGVLLTKVLLLELQRGLLEGDMRPAEVQNALALRPLNALTWPEVAADVLCALSVRRAYPGLAPPALAAMVTSRPPQWLA---RCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLDPE 330
            MAWDFL   R+LVG V  P +RM+ A+  P     A+P   ++   E  +LLTK+LL+E+ R +L   M    V + LA RP+N LTWPEVA D L AL   RA+P +    +AA+++ RP  WLA   RC D++++++  PL   F+R VDPA VPGY+ +V+ PMDL                                      E+++ W+AAD L+   ESLY++WVL PE
Sbjct:    1 MAWDFLSSSRDLVGMVLPPTKRMIHALTPPTGKAVAIPTPSELAFSEACMLLTKILLVEV-RDVLRRHMSKKLVDDVLAQRPVNLLTWPEVAGDALVALVNHRAHPEMRTSEMAALLSVRPSGWLASIIRCGDMVAILISRPLAAAFVRPVDPAQVPGYADVVSKPMDL--------------------------------------ENTDYWHAADSLALLTESLYESWVLQPE 196          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A836CNY5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNY5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 5.760e-35
Identity = 104/298 (34.90%), Postives = 146/298 (48.99%), Query Frame = 0
Query:   78 GRPAGPWEAASLSAVQVERVLMAWDFLCELRELVGFVDGPFQRMLVA---MEGPRPGEAAVPR-------------------AGQVMLDEGGVLLTKV-----------------LLLELQ----RGLLEGDMRPAEVQNALALRPLNALTWPEVAADVLCALSVRRAYPGLAPPALAAMVTSRPPQWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLDPEAA 332
            G PA    A S +   VE++L  WDF+   RE  G    P +  L     ++G                             +  ++ +E  ++LTKV                 LLLE+Q    +G   G +    V++A AL+PLNALTWPE AA  L AL+VRR +PGL    +A ++   P   L+RC D+L  ++ HPL+ PF+  VDP  V GY+++V  PMD+  VR RLW G  +  Y  H   A DVRL++ NA+ F+   + +  AA  L+  FE LY A V  PEAA
Sbjct: 1074 GDPAPLLGALSAAGPLVEKLLAMWDFVTVFREQFGCAAAPLESALAGTLLLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSDALLFEETCMVLTKVGEELRSARNDGSLDEWILLLEMQHLGGQGYHSGALTTKPVRDAHALKPLNALTWPEFAAQSLPALAVRRWHPGLMAVDVARIINLAPKGHLSRCGDVLCCLMVHPLIAPFMDPVDPQIVAGYAAVVATPMDVHLVRHRLWGGRNVPRYAHHRDFARDVRLIFDNARAFHRRGTPLHAAAAALAALFERLYAAHVTAPEAA 1371          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A6H5KEY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEY2_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 3.450e-19
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0
Query:  223 LARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLDP 329
            L RC  +L+ +  +     FL +VDPA VPGY + +T P+ +  V  RL RGG    Y   +  A DVRL WSNAKLFN E SE+W AAD LSR FE+L+  WV++P
Sbjct:  574 LVRCKSVLNRLCCNEDAIAFLESVDPAEVPGYHTKITRPVHMRLVDQRLKRGG----YLNEFAFASDVRLAWSNAKLFNREGSELWLAADRLSREFEALFCEWVINP 676          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A7S1V5M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V5M0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.210e-14
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 0
Query:  221 QWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVL 327
            Q + RC+ +L  I +      FL  VD    P Y  IV  PMDLGTVR +L +      Y      A DVR VW+N K++N   ++IW+ AD +S+ FE L+ AWVL
Sbjct:  362 QPMRRCLKVLDHIAEDSFADIFLEPVDTEDFPDYEDIVDQPMDLGTVREKLLKKK----YQAPENFARDVRKVWNNCKVYNQHGTQIWFVADYMSKHFERLFHAWVL 464          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A7S1YB59_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YB59_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.400e-14
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 0
Query:  221 QWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVL 327
            Q + RC+ +L  I +      FL  VD    P Y  IV  PMDLGTVR +L +      Y      A DVR VW+N K++N   ++IW+ AD +S+ FE L+ AWVL
Sbjct:  362 QPMRRCLKVLDHIAEDSFADIFLEPVDTEDFPDYEDIVDQPMDLGTVREKLLKKK----YQAPENFARDVRKVWNNCKVYNQHGTQIWFVADYMSKHFERLFHAWVL 464          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A1Z5JSQ4_FISSO (Chromodomain-helicase-DNA-binding protein 7 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSQ4_FISSO)

HSP 1 Score: 82.0 bits (201), Expect = 3.450e-13
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  221 QWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLD 328
            Q L RC+ +L  +        FL  VD    P Y  ++  PMDLGTVR +L        Y    + A D+R VW+N K++N   S IW+ AD +S+ FE LY AWVL+
Sbjct:  426 QPLRRCLMVLERLAKDSFADIFLEPVDTEDFPDYEEVIDSPMDLGTVRSKLMSKK----YQMPEQFARDMRKVWNNCKIYNQHGSAIWHVADYMSKLFERLYHAWVLE 529          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A7S3P5L3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P5L3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.460e-13
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  221 QWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLD 328
            Q L RC  +L  +        FL  VDP   P Y  ++  PMD+GTVR ++        Y    + A D+R +W+N K++N   S IW+ AD +S+ FE LY AWVL+
Sbjct:  448 QPLRRCRMVLERLAKDSFADIFLEPVDPDDFPDYDDVIDTPMDIGTVRTKMESKK----YQAPEQFARDMRKIWNNCKIYNQHGSAIWHVADYMSKQFERLYNAWVLE 551          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A7S2EV94_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EV94_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 6.160e-13
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0
Query:  221 QWLARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLD 328
            Q L RC+ +L  I        FL  VD    P Y   V  PMDLGTVR ++ R      Y      A D+R +W+N K++N   S IW+ AD +S+ FE LY AWVL+
Sbjct:   38 QPLRRCLKVLDRISADGFSNIFLEPVDTEQFPDYEEYVDQPMDLGTVRDKIVRRK----YQAPENFARDMRRIWNNCKVYNQHGSAIWHVADYMSKQFERLYHAWVLE 141          
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Match: A0A225X016_9STRA (Bromo domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X016_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.920e-13
Identity = 45/116 (38.79%), Postives = 62/116 (53.45%), Query Frame = 0
Query:  223 LARCVDILSVILDHPLVGPFLRAVDPASVPGYSSIVTHPMDLGTVRLRLWRGGGMYGYT---------GHWRMAGDVRLVWSNAKLFNPEDSEIWYAADVLSRAFESLYKAWVLDP 329
            L RC+ I+  +  HP   PFL  V+  +VP Y+ +V  PMDL  + ++L +G  +              H   A D+RL+WSN KLFN + S I  AAD+LS  FE LYK  +  P
Sbjct:  891 LDRCLKIVECLKSHPFSKPFLTPVE--NVPMYTRVVKQPMDLSRIEIKLKKGAYIVDSNTVASGVKELDHTHFANDIRLMWSNCKLFNDDGSGITRAADILSAGFERLYKESIAPP 1004          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.20018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBK0_ECTSI2.200e-5947.68Bromodomain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KKJ2_9PHAE3.390e-3838.72Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CNY5_9STRA5.760e-3534.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KEY2_9PHAE3.450e-1948.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1V5M0_9STRA3.210e-1441.12Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1YB59_9STRA4.400e-1441.12Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A1Z5JSQ4_FISSO3.450e-1339.81Chromodomain-helicase-DNA-binding protein 7 n=2 Ta... [more]
A0A7S3P5L3_9STRA3.460e-1337.96Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2EV94_9STRA6.160e-1340.74Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A225X016_9STRA6.920e-1338.79Bromo domain-containing protein n=1 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 251..267
score: 42.97
coord: 289..308
score: 38.91
coord: 237..250
score: 29.81
IPR001487BromodomainSMARTSM00297bromo_6coord: 219..327
e-value: 2.5E-9
score: 47.0
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 226..311
e-value: 1.9E-15
score: 56.7
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 234..308
score: 14.997
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 213..339
e-value: 1.5E-25
score: 91.5
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 204..326
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 219..324
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 219..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:507674..512180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.20018.1mRNA_S-ischiensis_contig83.20018.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 507674..512180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.20018.1 ID=prot_S-ischiensis_contig83.20018.1|Name=mRNA_S-ischiensis_contig83.20018.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=359bp
ERPGSAGGGEPPALIRLRSRPPPTLGSPEPLFRQKKTGPGQQHQQHQHQQ
HLHYHHGQQHFGSLQQSDRLEEGHRNKGRPAGPWEAASLSAVQVERVLMA
WDFLCELRELVGFVDGPFQRMLVAMEGPRPGEAAVPRAGQVMLDEGGVLL
TKVLLLELQRGLLEGDMRPAEVQNALALRPLNALTWPEVAADVLCALSVR
RAYPGLAPPALAAMVTSRPPQWLARCVDILSVILDHPLVGPFLRAVDPAS
VPGYSSIVTHPMDLGTVRLRLWRGGGMYGYTGHWRMAGDVRLVWSNAKLF
NPEDSEIWYAADVLSRAFESLYKAWVLDPEAAVSQPRKSVNGAPGACGST
GGASVQEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf