prot_S-ischiensis_contig8.19765.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19765.1
Unique Nameprot_S-ischiensis_contig8.19765.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length237
Homology
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: D7FSD9_ECTSI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD9_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 2.400e-92
Identity = 140/166 (84.34%), Postives = 153/166 (92.17%), Query Frame = 0
Query:   69 AATDLHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 234
            +A DL ++P MLIGHGFDIHRL  G +LVIGGV+IPYE GA+AHSDGDV+YHSVVDAILGALGLPDIGQ+FPDNDP WSGADSSIFMEEA+ RM+ERG+RVGNVDVTLILQKPKV DIKP MR+NIVRLLRTS  RVNVKARTHEKVD+VGEGRAMACHVVVLLEK
Sbjct:    2 SAPDL-EEPAMLIGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLLEK 166          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A7S2XZX5_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZX5_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.200e-89
Identity = 136/174 (78.16%), Postives = 149/174 (85.63%), Query Frame = 0
Query:   62 GAAPTMSAATDLHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKK 235
            G  PTM          P L+GHGFDIHRL PG  LVIGGV IPYE GAEAHSDGDV+YHSVVDAILGAL LPDIGQ+FPDNDP+W GADSS+FMEEA+ RM+E GY +GNVDVTLILQKPKVKDIKPAM+ENIVRLLRT+P +VNVKARTHEKVD+VGEGR+MACHVVVLL KK
Sbjct:   64 GTTPTM----------PFLVGHGFDIHRLAPGLPLVIGGVTIPYELGAEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPRWKGADSSVFMEEAYRRMDEAGYTIGNVDVTLILQKPKVKDIKPAMKENIVRLLRTTPSQVNVKARTHEKVDSVGEGRSMACHVVVLLMKK 227          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A7R9U3H3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H3_9STRA)

HSP 1 Score: 262 bits (669), Expect = 9.560e-86
Identity = 127/179 (70.95%), Postives = 152/179 (84.92%), Query Frame = 0
Query:   57 RLPRGGAAPTMSAATDLHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKK 235
            R+P G     + A  ++ ++P + IGHGFDIHR+ PG KLVIGGV I +E G EAHSDGDV+YHSVVDAILGAL LPDIGQ+FPDNDP+WSGADSSIFM+EA++RM+ RGYR+GNVDVTLILQKPKVKD KP M++NIV LL T+P RVNVKARTHEKVD+VGE RA++CHVV +LE+K
Sbjct:   29 RVPGG-----LKATQEVAEEPLLRIGHGFDIHRMAPGKKLVIGGVTIDFELGVEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPEWSGADSSIFMKEAYKRMDARGYRIGNVDVTLILQKPKVKDFKPLMKDNIVELLHTTPDRVNVKARTHEKVDSVGESRALSCHVVTILERK 202          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A835Z8X8_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 8.690e-82
Identity = 121/155 (78.06%), Postives = 136/155 (87.74%), Query Frame = 0
Query:   78 PMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLL 232
            P+ IGHG+DIHRL  G KLVIGGVDIP+EKGAEAHSDGDV+YHSVVDAILGAL +PDIGQ+FPDNDP+WSG+DSSIFMEEA+ RM  RGY +GNVDVTLILQ+PKV+DIKPAM +NI RLL   P RVNVKARTHE VD+VGE RAM CHVV+ L
Sbjct:    2 PVRIGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A7S0SRS3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRS3_9STRA)

HSP 1 Score: 250 bits (639), Expect = 3.570e-81
Identity = 122/165 (73.94%), Postives = 139/165 (84.24%), Query Frame = 0
Query:   70 ATDLHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 234
            +  L D+P + IGHGFDIHRL  G KLVIGGV IPY  GA+AHSDGD +YH VVDAILGAL LPDIGQIFPDNDPKW GADSSIFM EA+ RM ERGYR+ N+DVTLILQ PKVKDIKP+M+ENIV+LL T+  RVN+KARTHEKVD++GE ++ ACH VVLLEK
Sbjct:   38 SNQLIDEPSIRIGHGFDIHRLIEGTKLVIGGVTIPYHLGADAHSDGDALYHCVVDAILGALNLPDIGQIFPDNDPKWKGADSSIFMIEAYNRMIERGYRISNLDVTLILQSPKVKDIKPSMKENIVKLLHTADNRVNIKARTHEKVDSIGESKSYACHAVVLLEK 202          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A7S2WW46_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW46_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.230e-80
Identity = 123/170 (72.35%), Postives = 139/170 (81.76%), Query Frame = 0
Query:   67 MSAATDLHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKKS 236
            MS A     +P + IGHG+DIHRL PG  LVIGGVDI YE G EAHSDGDVV+HSVVDAI GALGLPDIGQ FPD DP+W GA S +FMEEA+ +M  RGY +GNVDVTLILQKPKV DIKP M++NIVRLLRTS  RVNVKARTHEKVD+VGE RA+ CHVV+ LEK++
Sbjct:   51 MSTAPSAETEPLLRIGHGYDIHRLAPGLPLVIGGVDIDYELGTEAHSDGDVVFHSVVDAIFGALGLPDIGQFFPDTDPRWKGASSDVFMEEAYNQMVARGYHIGNVDVTLILQKPKVMDIKPKMKDNIVRLLRTSESRVNVKARTHEKVDSVGECRALECHVVLTLEKQN 220          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A0G4H9P7_9ALVE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9P7_9ALVE)

HSP 1 Score: 239 bits (610), Expect = 1.750e-76
Identity = 114/161 (70.81%), Postives = 131/161 (81.37%), Query Frame = 0
Query:   75 DDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKK 235
            +DP   +GHG+DIHRL PG  L IGG+DIPYEKG EAHSDGDVV+HS+ DAI GAL LPDIGQ FPD DP+W GA S +FMEEAF +M+ERGYR+GN DVTLIL++PKVKD KP M + I  LLR    RVNVKARTHEKVD+VGE RA+ CHVVV+LEKK
Sbjct:   63 EDPQFRVGHGYDIHRLAPGLTLTIGGIDIPYEKGTEAHSDGDVVFHSLCDAIFGALSLPDIGQQFPDTDPRWKGAASCVFMEEAFRQMDERGYRIGNADVTLILERPKVKDFKPKMVDRICELLRAPHSRVNVKARTHEKVDSVGESRALECHVVVVLEKK 223          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A0G4FLM8_VITBC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLM8_VITBC)

HSP 1 Score: 235 bits (600), Expect = 6.770e-75
Identity = 110/160 (68.75%), Postives = 134/160 (83.75%), Query Frame = 0
Query:   76 DPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKK 235
            +P M IGHG+DIHRL PG +L +GGV I YEKG EAHSDGDV++HS+ DA+ GAL LPDIGQ FPD DPKW  A S +FME+A+ +MEERGYR+GNVDVTLIL++PKVKD+K  M++NI RL+R  P +VN+KARTHEKVD+VGE RA+ CHVVVLLE+K
Sbjct:   57 EPLMRIGHGYDIHRLAPGLQLTVGGVKIDYEKGTEAHSDGDVIFHSLCDAVFGALALPDIGQQFPDTDPKWKDASSDLFMEDAWRQMEERGYRLGNVDVTLILERPKVKDLKAGMKDNICRLMRVPPSQVNIKARTHEKVDSVGENRAIECHVVVLLERK 216          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: A0A7S0GXU7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GXU7_9EUKA)

HSP 1 Score: 235 bits (599), Expect = 6.920e-75
Identity = 115/159 (72.33%), Postives = 133/159 (83.65%), Query Frame = 0
Query:   76 DPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 234
            +P M IGHG+DIHRL  G  L IGGV IP+EKG  AHSDGDV+YHS+ DAILGA+G+PDIGQ+FPDNDP+W GA S  FM EA+  M+ERGY++GNVDVTLILQKPKVKDIKP M+ENIV+LL T   RVN+KARTHE VD+VGE RA+ACH VVLLEK
Sbjct:   60 EPAMRIGHGWDIHRLEDGLTLTIGGVVIPFEKGTVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDNDPQWKGAASHQFMTEAYRLMKERGYQIGNVDVTLILQKPKVKDIKPEMKENIVKLLNTDASRVNIKARTHENVDSVGEVRALACHSVVLLEK 218          
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Match: K8YUB0_NANGC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUB0_NANGC)

HSP 1 Score: 234 bits (596), Expect = 4.040e-74
Identity = 122/183 (66.67%), Postives = 137/183 (74.86%), Query Frame = 0
Query:   55 ATRLPRGGAAPTMSAATD---LHDDPPMLIGHGFDIHRLGPGNKLVIGGVDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGADSSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRTSPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 234
            AT  P    AP MSA ++      DPP  IGHGFDIHRL  G  LVIGGV I +EKG+ AHSDGD +YHSV DAILGA+GLPDIGQ+FPD DPKW GADS+ FM EA   M  RGYR+GNVDVTLILQKPKVKDIKP M+ N+V LL T   RVN+KARTHE VD+VGE R+   HVV+LLEK
Sbjct:   58 ATSTPPRKGAPRMSAYSEPVPQATDPPFRIGHGFDIHRLEAGLPLVIGGVKIEFEKGSAAHSDGDALYHSVTDAILGAIGLPDIGQLFPDTDPKWKGADSAQFMREARRLMTLRGYRIGNVDVTLILQKPKVKDIKPQMKANLVELLGTEESRVNIKARTHEHVDSVGESRSWVVHVVILLEK 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSD9_ECTSI2.400e-9284.342-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2XZX5_9STRA1.200e-8978.162-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7R9U3H3_9STRA9.560e-8670.952-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A835Z8X8_9STRA8.690e-8278.062-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0SRS3_9STRA3.570e-8173.942-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2WW46_9STRA1.230e-8072.352-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4H9P7_9ALVE1.750e-7670.812-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4FLM8_VITBC6.770e-7568.752-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0GXU7_9EUKA6.920e-7572.332-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
K8YUB0_NANGC4.040e-7466.672-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 79..233
e-value: 3.5E-64
score: 215.8
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 81..234
e-value: 1.6E-57
score: 191.9
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 79..234
score: 31.615
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 78..236
e-value: 7.6E-68
score: 229.7
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 79..234
NoneNo IPR availablePANTHERPTHR43181FAMILY NOT NAMEDcoord: 67..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.867
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 113..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3753584..3758995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19765.1mRNA_S-ischiensis_contig8.19765.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3753570..3760145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19765.1 ID=prot_S-ischiensis_contig8.19765.1|Name=mRNA_S-ischiensis_contig8.19765.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=237bp
MLSSWPLLLCLALVAAAAWPSQAFLGVVGIGPGTSATFGQLRSRSAVNPL
RMAPATRLPRGGAAPTMSAATDLHDDPPMLIGHGFDIHRLGPGNKLVIGG
VDIPYEKGAEAHSDGDVVYHSVVDAILGALGLPDIGQIFPDNDPKWSGAD
SSIFMEEAFERMEERGYRVGNVDVTLILQKPKVKDIKPAMRENIVRLLRT
SPRRVNVKARTHEKVDAVGEGRAMACHVVVLLEKKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003526MECDP_synthase
IPR036571MECDP_synthase_sf
IPR020555MECDP_synthase_CS