prot_S-ischiensis_contig8.19550.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19550.1
Unique Nameprot_S-ischiensis_contig8.19550.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length169
Homology
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A6H5KPW0_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPW0_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.060e-8
Identity = 31/55 (56.36%), Postives = 34/55 (61.82%), Query Frame = 0
Query:   47 AVVCSWPACGRRQQAPASGGPGGGFQRCGLCGVASYCSKECQVAHWKMAHKQLCK 101
            AV+CS   CGRRQ     G    GF+RCG C    YCSK+CQVAHWK  HK  CK
Sbjct:  385 AVLCSRETCGRRQ-----GDVKEGFKRCGRCRTTVYCSKDCQVAHWKEKHKMECK 434          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A444DXC6_ENSVE (MYND-type domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444DXC6_ENSVE)

HSP 1 Score: 59.3 bits (142), Expect = 1.060e-7
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0
Query:   46 GAVVCSWPACGRRQQAPASGGPGGGFQRCGLCGVASYCSKECQVAHWKMAHKQLC 100
            G  +CS+  CGR +           F+RC  CGVASYCS+ CQV HWK+AHK  C
Sbjct:  131 GLSLCSYGGCGRPETRRLE------FRRCSACGVASYCSRACQVLHWKLAHKAEC 179          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A836BNU9_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNU9_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 1.210e-6
Identity = 32/65 (49.23%), Postives = 36/65 (55.38%), Query Frame = 0
Query:   49 VCSWPACGRRQQAPASGGPGGGF--QRCGLCGVASYCSKECQVAHWKMAHKQLCKHSSCQGRGAG 111
             CS PAC     A  +G    G   QRCG CG ASYC ++CQ AHWK  HK+ C  SS  G  AG
Sbjct:  823 ACSNPAC-----ANLAGDSEAGLRLQRCGRCGQASYCCRDCQTAHWKAGHKEACGGSSGGGSKAG 882          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A835XZ10_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZ10_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.620e-6
Identity = 38/101 (37.62%), Postives = 48/101 (47.52%), Query Frame = 0
Query:   13 IDGDWGWANLRGAAVTLMLCAAECFRGQSARVRGAVVCSWPACGRRQQAPASGGPGGGF--QRCGLCGVASYCSKECQVAHWKMAHKQLCKHSSCQGRGAG 111
            +  +W    L  A    ++ AAE  R    R+     CS PAC     A  +G    G   QRCG CG ASYC ++CQ AHW+  HK+ C   S  G  AG
Sbjct:  701 VPAEWKANALLSALAPFLVPAAEARR----RLGLPPACSNPAC-----ANLAGDSEAGLRRQRCGRCGQASYCCRDCQTAHWRSGHKEACGGGSGGGSKAG 792          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A196SGB7_BLAHN (MYND-type zinc finger protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGB7_BLAHN)

HSP 1 Score: 54.7 bits (130), Expect = 3.810e-6
Identity = 24/52 (46.15%), Postives = 29/52 (55.77%), Query Frame = 0
Query:   49 VCSWPACGRRQQAPASGGPGGGFQRCGLCGVASYCSKECQVAHWKMAHKQLC 100
             CS P CG  +  P      G F++C  C  A YCSKECQ+ HWK  HK+ C
Sbjct:    6 TCSNPNCGNTESKP------GEFKKCSRCKTACYCSKECQLEHWKNGHKKEC 51          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A836BY12_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BY12_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 5.200e-6
Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   49 VCSWPACGRRQQAPASGGPGGGFQR--CGLCGVASYCSKECQVAHWKMAHKQLC 100
             CS PAC     A  +G    G +R  CG CG ASYC +ECQVAHWK  HK+ C
Sbjct:  523 ACSSPAC-----ASLAGDSEAGLRRQQCGRCGRASYCCRECQVAHWKAGHKEAC 571          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A836BX81_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BX81_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 5.470e-6
Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   49 VCSWPACGRRQQAPASGGPGGGFQR--CGLCGVASYCSKECQVAHWKMAHKQLC 100
             CS PAC     A  +G    G +R  CG CG ASYC +ECQVAHWK  HK+ C
Sbjct:  717 ACSSPAC-----ASLAGDSEAGLRRQQCGRCGRASYCCRECQVAHWKAGHKEAC 765          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A835XZA4_9CHLO (MYND-type domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZA4_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 7.720e-6
Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 0
Query:   49 VCSWPACGRRQQAPASGGPGGGFQR--CGLCGVASYCSKECQVAHWKMAHKQLC 100
             CS PAC     A  +G    G +R  CG CG ASYC +ECQVAHWK  HK+ C
Sbjct:  998 ACSNPAC-----ASLAGDSEAGLRRQQCGRCGRASYCCRECQVAHWKAGHKEAC 1046          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A1Y1HWN0_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWN0_KLENI)

HSP 1 Score: 55.1 bits (131), Expect = 1.000e-5
Identity = 21/41 (51.22%), Postives = 26/41 (63.41%), Query Frame = 0
Query:   71 FQRCGLCGVASYCSKECQVAHWKMAHKQLCKHSSCQGRGAG 111
            F+ C  C  A YCS+ECQ+ HWK  HKQ CK +  Q  G+G
Sbjct:  702 FKSCSACSAAQYCSRECQLIHWKRGHKQDCKKAKGQANGSG 742          
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Match: A0A1Y1HV21_KLENI (MYND-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HV21_KLENI)

HSP 1 Score: 54.7 bits (130), Expect = 1.380e-5
Identity = 24/46 (52.17%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   71 FQRCGLCGVASYCSKECQVAHWKMAHKQLCKHSSCQGRGAGNWGGR 116
            F+ CG CG A YCS+ECQ+ HWK  HK+ CK S  QG  +G   G+
Sbjct:  765 FKACGACGAAQYCSRECQMVHWKNGHKKDCKVSR-QGANSGREKGK 809          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KPW0_9PHAE1.060e-856.36MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A444DXC6_ENSVE1.060e-749.09MYND-type domain-containing protein n=2 Tax=Ensete... [more]
A0A836BNU9_9CHLO1.210e-649.23MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XZ10_9CHLO1.620e-637.62MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A196SGB7_BLAHN3.810e-646.15MYND-type zinc finger protein n=1 Tax=Blastocystis... [more]
A0A836BY12_9CHLO5.200e-651.85MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A836BX81_9CHLO5.470e-651.85MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A835XZA4_9CHLO7.720e-651.85MYND-type domain-containing protein n=1 Tax=Edapho... [more]
A0A1Y1HWN0_KLENI1.000e-551.22MYND-type domain-containing protein n=1 Tax=Klebso... [more]
A0A1Y1HV21_KLENI1.380e-552.17MYND-type domain-containing protein n=1 Tax=Klebso... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 70..100
e-value: 3.5E-7
score: 30.2
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 55..100
score: 10.851
NoneNo IPR availableGENE3D3.30.60.180coord: 48..104
e-value: 7.7E-11
score: 43.7
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 70..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2106036..2106542 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19550.1mRNA_S-ischiensis_contig8.19550.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2105786..2110173 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19550.1 ID=prot_S-ischiensis_contig8.19550.1|Name=mRNA_S-ischiensis_contig8.19550.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=169bp
MLAPEAVRLGLGIDGDWGWANLRGAAVTLMLCAAECFRGQSARVRGAVVC
SWPACGRRQQAPASGGPGGGFQRCGLCGVASYCSKECQVAHWKMAHKQLC
KHSSCQGRGAGNWGGRERQTCLAGLEGLRVGHGLGFGPGCYDTVPFCSEV
VHIVQYVRVLLSACTATP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND