prot_S-ischiensis_contig8.19540.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19540.1
Unique Nameprot_S-ischiensis_contig8.19540.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length660
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 518..551
e-value: 18.0
score: 8.3
coord: 461..488
e-value: 8.7
score: 10.5
coord: 490..517
e-value: 0.68
score: 18.3
coord: 432..459
e-value: 7.7
score: 10.9
NoneNo IPR availablePANTHERPTHR24112FAMILY NOT NAMEDcoord: 239..500
coord: 434..530
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 174..530
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 152..561
e-value: 6.0E-36
score: 125.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 490..508
e-value: 0.17
score: 12.0
coord: 462..483
e-value: 0.45
score: 10.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:2056513..2058768 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19540.1mRNA_S-ischiensis_contig8.19540.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 2055557..2058843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19540.1 ID=prot_S-ischiensis_contig8.19540.1|Name=mRNA_S-ischiensis_contig8.19540.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=660bp
MPPCEASVGAANMASSWQRACACAAFAWNTPSSPERSALQYYPVKSHRKT
PASPTRTWPGKDRDAKRVAQEPAVGEPGMGLFGQLDADNTRDVVSFLRTS
DVVRLMSCSRAMKRAVPDLVDRVDLCGHSMCKGSVTGMMPLHSLRPFRAV
RRLDVCCMPSVEAGDDLEYFSFLPNLTYCLTLFNNLEELRITDDDILEMV
DVLRSFLPPSIRVLQLGTEEPAQASPNRVVPSGGKVVQLFASRRWPCLTH
LELSGDWLSEETLASVVSVLSERGTLRQLEGLTLGPTVMSPKAGGRVCEA
LSVALRASGGRNRLRALRLAGSLQFPGCSVAALAEACTPAHCPELAELLL
DGGCRLDDAALCHLSDLLRQCTSLRSLSVGLAGVWGRSVGAEALAAALGG
EEHLRGLESLNVQHGRSLHEVTVRALLQSAGGAALKTLDLRGNRLGRGLS
GDLAAALERCGPWLEELDLSHNMLDDSSILLLATTVAERCPRLRRLRLGD
NLLGDVGAVGALAALQRLQHLEELDLLSHSVLGGTGLTPAGVVLLGKQLL
AGQGALGLRVLLPQDSVSVAHGCLYMDAAGVVREACTMECVVQCLDYVEG
TRLLGAAALVVRGEGRCHGCGPGVVAAVAGAGGGSGSSGGRCTGACGGRA
DRVQAVFYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt