prot_S-ischiensis_contig8.19528.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19528.1
Unique Nameprot_S-ischiensis_contig8.19528.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length177
Homology
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BLAST of mRNA_S-ischiensis_contig8.19528.1 vs. uniprot
Match: D7FHT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT7_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.430e-20
Identity = 42/75 (56.00%), Postives = 53/75 (70.67%), Query Frame = 0 
Query:   26 LVKLLACCAAAQCAETHVCSRRTQSVGATPCPRCGGSGGGSEWALGFALSLCELFGCCVAQREEVLEIVTSRVVL 100
            L K L+CCAA+QCAETH+CSRR    GA PC  CGG+GGGSEWA  FA++LC++F C    + E L++V S V  
Sbjct:   22 LAKYLSCCAASQCAETHICSRRVAKAGAAPCKHCGGAGGGSEWAKTFAMALCDIFDCPAVVQREALDLVVSAVAF 96
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHT7_ECTSI4.430e-2056.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1953125..1956426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19528.1mRNA_S-ischiensis_contig8.19528.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1953124..1956426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19528.1 ID=prot_S-ischiensis_contig8.19528.1|Name=mRNA_S-ischiensis_contig8.19528.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=177bp
ARFVVARGPFGGTKGRLSDMENEGSLVKLLACCAAAQCAETHVCSRRTQS
VGATPCPRCGGSGGGSEWALGFALSLCELFGCCVAQREEVLEIVTSRVVL
REKPGEKKEKDQHGQTHPPPPHQQHQHQLQETKPSHRQCTQQAAPGATTL
CPAPRPPGPGPRAPPGPDDGKLRQGLP
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