prot_S-ischiensis_contig8.19427.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19427.1
Unique Nameprot_S-ischiensis_contig8.19427.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length127
Homology
BLAST of mRNA_S-ischiensis_contig8.19427.1 vs. uniprot
Match: A0A8J2X1Z7_9STRA (RAB6-interacting golgin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X1Z7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 3.330e-16
Identity = 51/114 (44.74%), Postives = 81/114 (71.05%), Query Frame = 0
Query:   12 KELEVRETLKSKKLSLQQEARRLALVDKELAQLVQEYQAEINELRKSLEVVDXDLPFLDRDCKRKKEAYEKAQAALDKRREEKKGITDKLTQLILTSERRKDQKLNELMAKIAS 125
            KE ++++ L S++  +++EA RLAL + ELA+L ++  A++ +LR  LE  D DL +L+RD K K+ AY KA+ A +     K+ I + +T L+L+SERRK++KLNELMAK++S
Sbjct:  106 KERQIKQNLSSQRERVKKEAARLALFEGELAKLKEKEAADVADLRYQLEEADRDLVWLERDFKTKEAAYVKAKEAFETAAGRKREIKESMTLLVLSSERRKEEKLNELMAKMSS 219          
BLAST of mRNA_S-ischiensis_contig8.19427.1 vs. uniprot
Match: A0A7S3K3N0_9STRA (RAB6-interacting golgin n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3N0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.980e-11
Identity = 46/114 (40.35%), Postives = 73/114 (64.04%), Query Frame = 0
Query:   12 KELEVRETLKSKKLSLQQEARRLALVDKELAQLVQEYQAEINELRKSLEVVDXDLPFLDRDCKRKKEAYEKAQAALDKRREEKKGITDKLTQLILTSERRKDQKLNELMAKIAS 125
            KE +VR  L   +  +++E+ RLA V+ EL +L  + QA+I  LR  LE +D  L +L +D   K+ AY+K++ ALD     K+ + + L  ++L+SE+RK++KLNEL+A I S
Sbjct:  105 KETQVRTVLAEHQRRVREESERLAHVEIELRKLSAQEQADIGILRTQLEDIDRKLHWLQKDFNAKESAYKKSKEALDAMETRKRSMHEHLALMVLSSEKRKEEKLNELLANIDS 218          
BLAST of mRNA_S-ischiensis_contig8.19427.1 vs. uniprot
Match: A0A4D8ZWJ4_SALSN (RAB6-interacting golgin n=3 Tax=Salvia TaxID=21880 RepID=A0A4D8ZWJ4_SALSN)

HSP 1 Score: 55.8 bits (133), Expect = 4.340e-7
Identity = 35/117 (29.91%), Postives = 72/117 (61.54%), Query Frame = 0
Query:    7 EKLAKKELEVRETLKSKKLSLQQEARRLALVDKELAQLVQEYQAEINELRKSLEVVDXDLPFLDRDCKRKKEAYEKAQAALDKRREEKKGITDKLTQLILTSERRKDQKLNELMAKI 123
            E++ ++  E+RE L+++   +++EA+RL L+  EL  +    + E+  + K +E+V+ D+  L  +C++K++ Y ++  A D++++EK  +  KL +L+  SE+ +  KL EL   I
Sbjct:   52 EEIERRRSEIRERLQAQFTRVEEEAKRLHLIQSELDSVTDPMRKEVAAICKKVEIVNRDVKILGINCQKKEKEYRESAEAFDEKKKEKAQLLAKLAELVSESEKLRSSKLEELCKNI 168          
BLAST of mRNA_S-ischiensis_contig8.19427.1 vs. uniprot
Match: A0A804K8D9_MUSAM (RAB6-interacting golgin n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804K8D9_MUSAM)

HSP 1 Score: 55.1 bits (131), Expect = 9.380e-7
Identity = 35/113 (30.97%), Postives = 74/113 (65.49%), Query Frame = 0
Query:    7 EKLAKKELEVRETLKSKKLSLQQEARRLALVDKELAQLVQEYQAEINELRKSLEVVDXDLPFLDRDCKRKKEAYEKAQAALDKRREEKKGITDKLTQLILTSERRKDQKLNEL 119
            E++ +K++EVRE + ++   +++E++RLA++ KEL  +    + E++ +RK ++ V+ +L  L  +C +K++ Y++A  A + +  EK  + ++L +L+  SER + +KL EL
Sbjct:   55 EEIERKKMEVREKVFAQLGRVEEESKRLAVIQKELEAIADPTRKEVSAIRKKIDAVNRELKPLGHNCLKKEKEYKEALEAFNGKNREKAQLVNRLIELVSESERLRMKKLEEL 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A8J2X1Z7_9STRA3.330e-1644.74RAB6-interacting golgin n=1 Tax=Pelagomonas calceo... [more]
A0A7S3K3N0_9STRA2.980e-1140.35RAB6-interacting golgin n=1 Tax=Aureoumbra lagunen... [more]
A0A4D8ZWJ4_SALSN4.340e-729.91RAB6-interacting golgin n=3 Tax=Salvia TaxID=21880... [more]
A0A804K8D9_MUSAM9.380e-730.97RAB6-interacting golgin n=2 Tax=Musa acuminata sub... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 27..65
NoneNo IPR availableCOILSCoilCoilcoord: 73..100
IPR007033RAB6-interacting golginPFAMPF04949Transcrip_actcoord: 6..124
e-value: 1.4E-14
score: 54.3
IPR007033RAB6-interacting golginPANTHERPTHR21470NTKL-BINDING PROTEIN 1coord: 6..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1379023..1382261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19427.1mRNA_S-ischiensis_contig8.19427.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1379023..1382263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19427.1 ID=prot_S-ischiensis_contig8.19427.1|Name=mRNA_S-ischiensis_contig8.19427.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=127bp
AEAAAKEKLAKKELEVRETLKSKKLSLQQEARRLALVDKELAQLVQEYQA
EINELRKSLEVVDKDLPFLDRDCKRKKEAYEKAQAALDKRREEKKGITDK
LTQLILTSERRKDQKLNELMAKIASAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007033GORAB