prot_S-ischiensis_contig110.2416.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig110.2416.1
Unique Nameprot_S-ischiensis_contig110.2416.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length70
Homology
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A7S6U9S9_9STRA (50S ribosomal protein L27, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9S9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.540e-42
Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFN 70
            +AHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFN
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFN 70          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A2R4QPT1_9PHAE (50S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPT1_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 6.090e-34
Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS  KRLGVKCF GH+V AG+I++RQRGLTFKPG NVG+GKDYT+YALK G+VYF
Sbjct:    1 MAHKKGAGSTKNGRDSKPKRLGVKCFHGHQVKAGNILIRQRGLTFKPGDNVGIGKDYTLYALKEGMVYF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A141BSB3_9PHAE (50S ribosomal protein L27, chloroplastic n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSB3_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 7.120e-33
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS SKRLGVKCF GH+V AG+I++RQRGL FKPG NVG+G+DYT+YALK GLV+F
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFHGHQVRAGNILIRQRGLKFKPGQNVGIGRDYTLYALKEGLVFF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A6P0NBT8_9CYAN (50S ribosomal protein L27 n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NBT8_9CYAN)

HSP 1 Score: 116 bits (291), Expect = 9.830e-33
Identity = 53/69 (76.81%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS +KRLGVKCF GH+V AG+IIVRQRGL+FKPG  +GVGKDYT+YALK G+V++
Sbjct:    1 MAHKKGAGSTKNGRDSKAKRLGVKCFSGHRVGAGNIIVRQRGLSFKPGAQIGVGKDYTLYALKEGVVFY 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A8F0F6S3_AKKLU (Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A8F0F6S3_AKKLU)

HSP 1 Score: 116 bits (291), Expect = 1.010e-32
Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS SKRLGVKCF GHKV AG+I++RQRGL++KPG NVG+G+DYT+YALK GLV F
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHKVQAGNILIRQRGLSYKPGENVGIGRDYTLYALKEGLVSF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A8F0F9K0_9PHAE (Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F9K0_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.480e-32
Identity = 55/69 (79.71%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS SKRLGVKCF GH V AG+I++RQRGL+FKPG NVGVG+DYT+YALK GLV F
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVQAGNILIRQRGLSFKPGSNVGVGRDYTLYALKEGLVSF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A8F0F794_9PHAE (Ribosomal protein L27 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F794_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.040e-32
Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS SKRLGVKCF GH+V AG+I++RQRGL+FKPG NVG GKDYT+YALK G V+F
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHQVQAGNILIRQRGLSFKPGENVGTGKDYTLYALKEGSVFF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A2I4Q2P8_9PHAE (50S ribosomal protein L27 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2P8_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 5.860e-32
Identity = 53/70 (75.71%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYFN 70
            +AHKKGAGSTKNGRDSNSKRLGVKCF G KV AG+I++RQRGL FKPG++VGVGKDYT+YALK G+  ++
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFHGQKVQAGNILIRQRGLHFKPGLHVGVGKDYTLYALKQGMTVYS 70          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A0R6MBY3_UNDPI (50S ribosomal protein L27, chloroplastic n=23 Tax=Laminariales TaxID=2886 RepID=A0A0R6MBY3_UNDPI)

HSP 1 Score: 114 bits (286), Expect = 6.200e-32
Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDS SKRLGVKCF GH V AG+I++RQRGL+FKPG NVG+GKDYT+YAL +GLV F
Sbjct:    1 MAHKKGAGSTKNGRDSKSKRLGVKCFQGHPVEAGNILIRQRGLSFKPGDNVGIGKDYTLYALTAGLVSF 69          
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Match: A0A6B7EYQ0_9PHAE (50S ribosomal protein L27 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYQ0_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.890e-31
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    1 LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGINVGVGKDYTIYALKSGLVYF 69
            +AHKKGAGSTKNGRDSNSKRLGVKCF GHKV AGSI++RQRG TF+PG NVG+G+DYT+YA   GLV F
Sbjct:    1 MAHKKGAGSTKNGRDSNSKRLGVKCFHGHKVQAGSILIRQRGETFEPGKNVGIGRDYTLYASVDGLVSF 69          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6U9S9_9STRA2.540e-4298.5750S ribosomal protein L27, chloroplastic n=1 Tax=S... [more]
A0A2R4QPT1_9PHAE6.090e-3479.7150S ribosomal protein L27 n=3 Tax=Fucaceae TaxID=3... [more]
A0A141BSB3_9PHAE7.120e-3378.2650S ribosomal protein L27, chloroplastic n=14 Tax=... [more]
A0A6P0NBT8_9CYAN9.830e-3376.8150S ribosomal protein L27 n=1 Tax=Moorena sp. SIO3... [more]
A0A8F0F6S3_AKKLU1.010e-3278.26Ribosomal protein L27 n=2 Tax=Phaeophyceae TaxID=2... [more]
A0A8F0F9K0_9PHAE1.480e-3279.71Ribosomal protein L27 n=2 Tax=Laminariales TaxID=2... [more]
A0A8F0F794_9PHAE2.040e-3278.26Ribosomal protein L27 n=1 Tax=Protohalopteris sp. ... [more]
A0A2I4Q2P8_9PHAE5.860e-3275.7150S ribosomal protein L27 n=1 Tax=Dictyopteris div... [more]
A0A0R6MBY3_UNDPI6.200e-3278.2650S ribosomal protein L27, chloroplastic n=23 Tax=... [more]
A0A6B7EYQ0_9PHAE3.890e-3178.2650S ribosomal protein L27 n=1 Tax=Cladosiphon okam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 54..70
score: 34.31
coord: 29..53
score: 56.92
coord: 4..28
score: 70.77
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 2..69
e-value: 1.4E-31
score: 106.4
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 2..70
e-value: 2.5E-33
score: 113.9
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 2..69
NoneNo IPR availableGENE3D2.40.50.1030coord: 6..70
e-value: 3.4E-25
score: 90.2
NoneNo IPR availablePRODOMPD003114coord: 29..69
e-value: 3.0E-11
score: 159.0
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 2..69
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 34..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig110contigS-ischiensis_contig110:116737..116946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig110.2416.1mRNA_S-ischiensis_contig110.2416.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig110 116737..116946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig110.2416.1 ID=prot_S-ischiensis_contig110.2416.1|Name=mRNA_S-ischiensis_contig110.2416.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=70bp
LAHKKGAGSTKNGRDSNSKRLGVKCFGGHKVSAGSIIVRQRGLTFKPGIN
VGVGKDYTIYALKSGLVYFN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS