prot_S-ischiensis_contig11.2391.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2391.1
Unique Nameprot_S-ischiensis_contig11.2391.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length144
Homology
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BLAST of mRNA_S-ischiensis_contig11.2391.1 vs. uniprot
Match: A0A6H5KCW0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.900e-17
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0 
Query:   41 TVDSLWGLWGAVKTKAKAAVGIAVA-APVAVEADPAYAAAVAGLDELGTPIARAVKAVEAATKLKRGYAYEMSRQGHYLTQVAYVEE 126
            ++ S+ G+ GAVKTKAK+AVG+    AP+AVE DP Y A VA ++EL  P+A +VK +E+A  LKRG  YEMSR GHYLTQVA +E+
Sbjct:  452 SLTSIKGVLGAVKTKAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLED 538
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BLAST of mRNA_S-ischiensis_contig11.2391.1 vs. uniprot
Match: D7FWD5_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD5_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 5.160e-17
Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 0 
Query:   12 GGGAGMGTESWPLSV-ARAAAGPYASHLAGTVD----SLWGLWGAVKTKAKAAVGIAVA-APVAVEADPAYAAAVAGLDELGTPIARAVKAVEAATKLKRGYAYEMSRQGHYLTQVAYVEE 126
            GGG G G     LSV A      Y ++++ +V     S+ G+ GAVKT+AK+AVG+    AP+AVE DP Y A VA ++EL  P+A +VK +E+A  LKRG  YEMSR GHYLTQVA +E+
Sbjct:  468 GGGQGPGWTGSALSVVANVGYEAYENYVSTSVSTSLTSIKGVLGAVKTRAKSAVGLGAGPAPIAVEPDPLYEAEVARIEELVAPVAGSVKIMESAAVLKRGVGYEMSRLGHYLTQVASLED 588
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCW0_9PHAE2.900e-1757.47PX domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FWD5_ECTSI5.160e-1749.59PX domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:3563595..3565056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2391.1mRNA_S-ischiensis_contig11.2391.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 3563595..3565057 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2391.1 ID=prot_S-ischiensis_contig11.2391.1|Name=mRNA_S-ischiensis_contig11.2391.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=144bp
PGSVTTDASDGGGGAGMGTESWPLSVARAAAGPYASHLAGTVDSLWGLWG
AVKTKAKAAVGIAVAAPVAVEADPAYAAAVAGLDELGTPIARAVKAVEAA
TKLKRGYAYEMSRQGHYLTQVAYVEEPAPDGGGGGSGDGRRPED
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