prot_S-ischiensis_contig11.2360.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2360.1
Unique Nameprot_S-ischiensis_contig11.2360.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length229
Homology
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BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: D7FSF1_ECTSI (Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF1_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 4.510e-61
Identity = 97/102 (95.10%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDNRQ+KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 113
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BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A7S2CHD5_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2CHD5_9STRA)

HSP 1 Score: 199 bits (505), Expect = 6.600e-61
Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+NIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEA+QNSN NMV
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEAKQNSNPNMV 113
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BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A835Z1V8_9STRA (Rab2A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V8_9STRA)

HSP 1 Score: 197 bits (502), Expect = 2.060e-60
Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQP+HDLTIGVEFGARMIN+D RQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPLHDLTIGVEFGARMINVDARQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 113
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BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A6V1NY85_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NY85_HETAK)

HSP 1 Score: 197 bits (500), Expect = 3.890e-60
Identity = 96/102 (94.12%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+ID+R+IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIDIDSRKIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 113
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: M4B5K5_HYAAE (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=M4B5K5_HYAAE)

HSP 1 Score: 196 bits (499), Expect = 5.510e-60
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINI+N+QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM 
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMA 113
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A2R5GRM2_9STRA (Ras-related protein Rab-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRM2_9STRA)

HSP 1 Score: 196 bits (499), Expect = 6.250e-60
Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQN+N+NMV
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNANANMV 113
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A485LBB8_9STRA (Aste57867_18783 protein n=7 Tax=Oomycota TaxID=4762 RepID=A0A485LBB8_9STRA)

HSP 1 Score: 196 bits (498), Expect = 8.060e-60
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI+IDN+QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM 
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMA 113
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A024UMG6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UMG6_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.930e-59
Identity = 95/102 (93.14%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM 
Sbjct:   40 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMA 141
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A7S2V0L3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L3_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.900e-59
Identity = 95/102 (93.14%), Postives = 99/102 (97.06%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINID++QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF+HLTRWLEEARQNSNSNMV
Sbjct:   42 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTRWLEEARQNSNSNMV 143
[Close]
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Match: A0A2D4BXC9_PYTIN (Rab2 family GTPase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXC9_PYTIN)

HSP 1 Score: 198 bits (503), Expect = 6.260e-59
Identity = 96/102 (94.12%), Postives = 98/102 (96.08%), Query Frame = 0 
Query:   42 ISRAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMV 143
            I   GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDN+QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLTRWLEEARQNSNSNM 
Sbjct:   12 IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMA 113
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF1_ECTSI4.510e-6195.10Rab2A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2CHD5_9STRA6.600e-6194.12Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A835Z1V8_9STRA2.060e-6094.12Rab2A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1NY85_HETAK3.890e-6094.12Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
M4B5K5_HYAAE5.510e-6093.14Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]
A0A2R5GRM2_9STRA6.250e-6093.14Ras-related protein Rab-2 n=1 Tax=Hondaea fermenta... [more]
A0A485LBB8_9STRA8.060e-6093.14Aste57867_18783 protein n=7 Tax=Oomycota TaxID=476... [more]
A0A024UMG6_9STRA1.930e-5993.14Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2V0L3_9STRA2.900e-5993.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2D4BXC9_PYTIN6.260e-5994.12Rab2 family GTPase, putative n=1 Tax=Pythium insid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 37..58
score: 36.21
coord: 78..100
score: 51.79
coord: 60..76
score: 32.76
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 46..156
e-value: 3.8E-5
score: -34.4
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 45..159
e-value: 0.0049
score: -77.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 45..171
e-value: 1.2E-34
score: 131.2
NoneNo IPR availableGENE3D3.40.50.300coord: 42..149
e-value: 6.1E-38
score: 132.1
NoneNo IPR availablePANTHERPTHR24073:SF990RAS-RELATED PROTEIN RAB-2Acoord: 36..144
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 36..144
NoneNo IPR availablePROSITEPS51419RABcoord: 32..229
score: 20.947
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 44..139
e-value: 2.1E-17
score: 61.3
IPR001806Small GTPasePFAMPF00071Rascoord: 45..142
e-value: 6.7E-35
score: 120.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 45..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:3359374..3361885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2360.1mRNA_S-ischiensis_contig11.2360.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 3359371..3361885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2360.1 ID=prot_S-ischiensis_contig11.2360.1|Name=mRNA_S-ischiensis_contig11.2360.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=229bp
MHKNTHPARARTHTHTQTNTTPHTHGRVHTASAAAPLQRADISRAGVGKS
CLLLQFTDKRFQPVHDLTIGVEFGARMINIDNRQIKLQIWDTAGQESFRS
ITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVSRCCTYV
GRLGTTTEPGWEGVATPPPEAEGRASPYPPHPGLVRVRVVGPPPLLDPGL
AGEGVPSPCRDTAGGDPRYPSMVPTRSNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase