prot_S-ischiensis_contig107.1891.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig107.1891.1
Unique Nameprot_S-ischiensis_contig107.1891.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length150
Homology
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BLAST of mRNA_S-ischiensis_contig107.1891.1 vs. uniprot
Match: D8LQX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX2_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 8.900e-17
Identity = 61/154 (39.61%), Postives = 81/154 (52.60%), Query Frame = 0 
Query:    1 MALTGRRVEVFWPPEEDDTAGEWYRGTLDKFKDGKGYHVLYDDGDEEWVGE-VDG-ENIKLL----------EEHTDEGDGFQEDGGNSTGPGQIERAEHTLGYTGDSFEEPQSPCPGDADVAPVL--DPGFPARPSPFECKSEAAVLRSDQAL 140
            MA  G+RVEVFWPPE DDT G WY G LD + D  GYHV YDDGDEE +GE +DG ++I LL            +  EG   + D  +  G  + E     +G  G +  EP SP P  + +A +   + G PA  SP +C       RS+ ++
Sbjct:    1 MAHVGQRVEVFWPPEGDDTEGNWYCGELDGYDDAAGYHVTYDDGDEEVLGEQIDGRDDIHLLPLWSPPDGGDNRNPPEGVAHRRD--DKPGVPEEEGENGRIGQRGKATSEPDSPTPTGSGLAAMSYREIGRPA--SPPDCDGSNTSPRSNLSM 150
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig107.1891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQX2_ECTSI8.900e-1739.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 2..61
e-value: 3.6E-7
score: 31.9
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 3..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig107contigS-ischiensis_contig107:16543..17371 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig107.1891.1mRNA_S-ischiensis_contig107.1891.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig107 16543..17393 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig107.1891.1 ID=prot_S-ischiensis_contig107.1891.1|Name=mRNA_S-ischiensis_contig107.1891.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=150bp
MALTGRRVEVFWPPEEDDTAGEWYRGTLDKFKDGKGYHVLYDDGDEEWVG
EVDGENIKLLEEHTDEGDGFQEDGGNSTGPGQIERAEHTLGYTGDSFEEP
QSPCPGDADVAPVLDPGFPARPSPFECKSEAAVLRSDQALHAIEGDLSGQ
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