prot_S-ischiensis_contig105.1849.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig105.1849.1
Unique Nameprot_S-ischiensis_contig105.1849.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length218
Homology
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.100e-107
Identity = 150/188 (79.79%), Postives = 164/188 (87.23%), Query Frame = 0
Query:   32 RTPEEKGGQKIQLLGIGGRRTR--SSKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            +  EEK   K+ +LGIGGRR +  S+KA  TKKTPGEIRIQKDIA+LDGGSVAEITFPNPNNLT+F VKV PDSGFWKGASY FTF +P LYPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR++I  FER VKRTL G ++ GE F+RL+
Sbjct:   35 KADEEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPKVLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 222          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA)

HSP 1 Score: 303 bits (777), Expect = 1.980e-102
Identity = 140/176 (79.55%), Postives = 154/176 (87.50%), Query Frame = 0
Query:   42 IQLLGIGGRRTRSSKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            ++LLGIGGRRT+ +  A  KKTPGEIRIQKDIAELDGG+VA ITFP+PNNL  F V VTPDSG+WKGASY FTF +P  YPHDPPKVLC TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRN+I  F+R+V+RTLQG  + G+ F RLV
Sbjct:   32 VKLLGIGGRRTKKTGKAPPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPKVLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK)

HSP 1 Score: 296 bits (757), Expect = 4.990e-99
Identity = 140/189 (74.07%), Postives = 161/189 (85.19%), Query Frame = 0
Query:   35 EEKGGQK-----IQLLGIGGRRTRSSKAASTKK-TPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            E KGG+      ++LLGIGG+++R+  A  TKK TPGE+RIQKDIAELDGG+VA ITFPNPNNLT+F V+VTPD+G W+GA+Y FTF +P +YPH+PPKV C TKIYHPNINLQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLN EAAELYRND + FERVV+R+LQG  VG E FERL+
Sbjct:   43 ESKGGESKSSGGVKLLGIGGKKSRTGGAKKTKKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPKVHCHTKIYHPNINLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNREAAELYRNDARQFERVVRRSLQGYSVGAEQFERLI 231          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A7S3M2N2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2N2_9STRA)

HSP 1 Score: 286 bits (732), Expect = 2.180e-95
Identity = 135/184 (73.37%), Postives = 154/184 (83.70%), Query Frame = 0
Query:   35 EEKGGQKIQLLGIGGRRTRS-SKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            EE+G   + LLGIGG++ +S +K A  K+TPGEIRIQKDIAELDGGSVA++ FPNPN+LT F V V+PDSGFW GA Y FT  +P LYPH+PPKV C TKIYHPNINL+GNVCLNILRE+WKPVLDINAVIYG+IYLFYEPNP+DPLN EAA+LYR D   FERVVKRTLQG    GEAFERL+
Sbjct:   37 EEEGAGGLSLLGIGGKQIKSGAKKAGKKRTPGEIRIQKDIAELDGGSVAQVDFPNPNDLTNFTVTVSPDSGFWSGAKYVFTVAIPALYPHEPPKVTCRTKIYHPNINLEGNVCLNILREEWKPVLDINAVIYGMIYLFYEPNPDDPLNREAADLYRTDKNQFERVVKRTLQGYSHAGEAFERLI 220          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A448YW25_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW25_9STRA)

HSP 1 Score: 286 bits (731), Expect = 2.890e-95
Identity = 133/188 (70.74%), Postives = 158/188 (84.04%), Query Frame = 0
Query:   31 SRTPEEKGGQKIQLLGIGG-RRTRSSKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            S + EE GGQ + L GIGG ++T+  ++++TKKTPGEIRIQKDI ELDGG VAE+TFP PN+LT+F+V +TPD+G+WKGA Y+F F VP  YPH PPKV C T IYHPNI+LQG VCLNILREDW+PVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R DIQSFER+V RTL+G  + G  FERLV
Sbjct:   32 SESTEEGGGQ-VSLFGIGGQKKTKKGESSATKKTPGEIRIQKDIGELDGGKVAEVTFPKPNDLTSFNVSITPDTGYWKGARYEFEFKVPAHYPHSPPKVECKTSIYHPNIDLQGKVCLNILREDWRPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDIQSFERLVNRTLRGGTLDGVTFERLV 218          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A7R9W2H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2H1_9STRA)

HSP 1 Score: 286 bits (731), Expect = 1.240e-94
Identity = 130/181 (71.82%), Postives = 153/181 (84.53%), Query Frame = 0
Query:   40 QKIQLLGIGGRRTRS---SKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            +K+ +LGIGG++ +    + ++S K+TPGEIRIQKDIAELDGG VA I FPNPN+LTTFHV+VTPD+GFWKGASY FTF +PD YPH PPKV C TKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R D+  F+R+V RTL G ++    F+RLV
Sbjct:   81 KKVSILGIGGKKKKDKGENSSSSKKRTPGEIRIQKDIAELDGGKVATIDFPNPNDLTTFHVRVTPDTGFWKGASYLFTFQIPDHYPHSPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRRDVNQFQRLVSRTLSGGILDNVQFQRLV 261          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A6T7JLN4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JLN4_9STRA)

HSP 1 Score: 281 bits (718), Expect = 3.140e-93
Identity = 128/181 (70.72%), Postives = 151/181 (83.43%), Query Frame = 0
Query:   40 QKIQLLGIGGRRTRS---SKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            +K+ LLGIGG++  S   + +   K+TPGEIRIQKDIAELDGG VA I FPNPN+LT FHV +TPD+GFWKGA Y FTF +P  YPH+PPKV CGT+IYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R D+  F R+V+RTL+G ++ G  FERLV
Sbjct:   42 KKVSLLGIGGKKNASKGENGSGGKKRTPGEIRIQKDIAELDGGKVAIIDFPNPNDLTMFHVAITPDTGFWKGAKYDFTFQIPAHYPHNPPKVTCGTQIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDVNQFNRLVQRTLRGGILDGVPFERLV 222          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA)

HSP 1 Score: 280 bits (716), Expect = 4.820e-93
Identity = 128/186 (68.82%), Postives = 154/186 (82.80%), Query Frame = 0
Query:   35 EEKGGQKIQLLGIGGRRTRSSKAAST---KKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            +E    K+ LLG+GG++ ++   + T   K+TPGEIRIQKDIAELDGG VA I FPNPN+LT F V+V PDSG+W+GA+Y F+FNVP  YPH+PPKV C TKIYHPNI+LQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R D++ FER+V RTL+G ++ G  FE+LV
Sbjct:   29 DEGDSNKVSLLGVGGKKKKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPKVECHTKIYHPNIDLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVNRTLRGGVLDGVQFEKLV 214          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC)

HSP 1 Score: 276 bits (706), Expect = 1.960e-91
Identity = 126/179 (70.39%), Postives = 153/179 (85.47%), Query Frame = 0
Query:   41 KIQLLGIGGRR-TRSSKAASTKK-TPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            K+ LLG+GG++ T++ +  +TKK +PGEIRIQKDIAELDGG+VA I FPN N+LT+FHV ++PDSG+WKGA+Y FTF +P  YPH PPKV C TKIYHPNI+LQG VCLNILREDWKPVLDIN V+YGLIYLFYEPNP+DPLNHEAAEL+R D++ FER+V RTL+G ++ G  FERLV
Sbjct:   42 KVSLLGVGGKKQTKNGECKATKKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPKVECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220          
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Match: K0T069_THAOC (UBC core domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T069_THAOC)

HSP 1 Score: 275 bits (704), Expect = 3.690e-91
Identity = 124/181 (68.51%), Postives = 151/181 (83.43%), Query Frame = 0
Query:   41 KIQLLGIGGRRTRSSK----AASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVTPDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVKRTLQGAMVGGEAFERLV 217
            K+ LLGIGG++ +++     +   K+TPGEIRIQKDIA+LDGG VA I FPNPNNLT F V +TPDSG+WK A+Y F F++PD YPH PPKV C TKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLI+LFYEPNP+DPLNHEAA+L+R DI+ FER+V+RTL+G ++ G  F+RL+
Sbjct:   38 KVSLLGIGGKKKKANDGNGASGKKKRTPGEIRIQKDIADLDGGKVANIEFPNPNNLTAFEVSITPDSGYWKNATYNFKFDIPDHYPHTPPKVHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIFLFYEPNPDDPLNHEAADLFRRDIRQFERLVQRTLRGGVMDGVHFDRLI 218          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig105.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA52_9PHAE1.100e-10779.79UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YZU8_9STRA1.980e-10279.55Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A6V1TYK4_HETAK4.990e-9974.07Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3M2N2_9STRA2.180e-9573.37Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A448YW25_9STRA2.890e-9570.74UBC core domain-containing protein n=1 Tax=Pseudo-... [more]
A0A7R9W2H1_9STRA1.240e-9471.82Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A6T7JLN4_9STRA3.140e-9370.72Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3KW38_9STRA4.820e-9368.82Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G8G3_PHATC1.960e-9170.39Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
K0T069_THAOC3.690e-9168.51UBC core domain-containing protein n=2 Tax=Thalass... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 67..208
e-value: 2.1E-40
score: 150.2
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 54..214
NoneNo IPR availablePANTHERPTHR24068:SF132NEDD8-CONJUGATING ENZYME UBC12coord: 54..214
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 69..201
e-value: 8.0E-36
score: 122.8
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 67..197
score: 28.825
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 60..217
e-value: 5.0E-54
score: 184.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 55..208
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 135..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig105contigS-ischiensis_contig105:226310..230261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig105.1849.1mRNA_S-ischiensis_contig105.1849.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig105 226284..230782 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig105.1849.1 ID=prot_S-ischiensis_contig105.1849.1|Name=mRNA_S-ischiensis_contig105.1849.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=218bp
MIRLKKKQEEEENSQNGEAASSAGASGSGSSRTPEEKGGQKIQLLGIGGR
RTRSSKAASTKKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFHVKVT
PDSGFWKGASYKFTFNVPDLYPHDPPKVLCGTKIYHPNINLQGNVCLNIL
REDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNDIQSFERVVK
RTLQGAMVGGEAFERLV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS