prot_S-ischiensis_contig10.1649.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig10.1649.1
Unique Name	prot_S-ischiensis_contig10.1649.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	664

Homology

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BLAST of mRNA_S-ischiensis_contig10.1649.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.320e-59
Identity = 132/467 (28.27%), Postives = 240/467 (51.39%), Query Frame = 0

Query:   39 STSSSSFTEDWWIDLAVPNDTYVPAVYEAGNAVDISHNVLGNARDNEYDLDEASYTEGIAYVFSIFMVVGIIACVCIPVGRCCIWRDCCCCECLIPDQVEKVGSE-KWIKW-------LFVFFSLLGLAGTVGAVYGFVNVDEAMSRVTSTSYGLSDDMNQAVAIADDTLVTVEGVRADLDSVTDAAGDC--GAP-DSATDAFSDFDDYLAGVEEELVAVQNSGFISLAEQVTDIANETEDWDGVRRGVVWTLLAVCMVGSLGYIGLSFAAVRWGVTKGGASEWMRREERVERWAHCVVNPCSLIIVIAAWVMAALAITLAAFSGDFCVDPDAHIVDALDNDPDA------TYYAGDCTGPNTVLDPVLRGQLLAVENVPMIIPAVDQVVEFCSDASDSADSLEQGLFSIWQALAEAADLASCRNLNGAYAEAVYEGLCRDLTAGLTALWVSVVILACCHVFLGLLW 488
            +T+S++  + W+  ++V +  Y PA +  G +V+ +H++L   R+N++D+++A Y+ G+  +  +F+V G++                     L   + E++    K+ K        L V  S+  +A   GA++G    D  ++ +   +  ++ DM   + +A+DT V ++ V A  +++ ++   C  GA   S  DAF D +   A V+ E+  V    F  LA+ V  I++   D +G R+G++W +L + ++ +  ++ +S +            E +    R    A C +NPC++ + +  W+ AALA++L+A +GDFC+DPDA+  + + ++ D       TYY GDCT  N  +D ++  Q +AV  +  ++P + Q+   CSD ++   +L+  L S W  L +A +L+SC NLNG Y  AVY+ LC+ L  GL   WVS   L    + L + W
Sbjct:    2 TTTSTTGGDAWYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXXXX----------XXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNGAILSSLLDAF-DINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTY----------ECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTDGEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQW 447

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig10.1649.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig10.1649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5L0W0_9PHAE	2.320e-59	28.27	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006990	Tweety	PFAM	PF04906	Tweety	coord: 318..480 e-value: 2.0E-11 score: 43.2
IPR006990	Tweety	PANTHER	PTHR12424	TWEETY-RELATED	coord: 82..484
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 276..303
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 469..491
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 492..664
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 170..275
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 304..323
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 96..115
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 116..147
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..169
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 351..468
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 324..350
None	No IPR available	TMHMM	TMhelix		coord: 330..352
None	No IPR available	TMHMM	TMhelix		coord: 469..491
None	No IPR available	TMHMM	TMhelix		coord: 276..298
None	No IPR available	TMHMM	TMhelix		coord: 96..118
None	No IPR available	TMHMM	TMhelix		coord: 148..170

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig10	contig	S-ischiensis_contig10:3448324..3458255 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig10.1649.1	mRNA_S-ischiensis_contig10.1649.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig10 3448323..3458255 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig10.1649.1 ID=prot_S-ischiensis_contig10.1649.1|Name=mRNA_S-ischiensis_contig10.1649.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=664bp
ALSSWLPKGPHWRFCEATSRGVMSILGTGAAVVARVLQSTSSSSFTEDWW
IDLAVPNDTYVPAVYEAGNAVDISHNVLGNARDNEYDLDEASYTEGIAYV
FSIFMVVGIIACVCIPVGRCCIWRDCCCCECLIPDQVEKVGSEKWIKWLF
VFFSLLGLAGTVGAVYGFVNVDEAMSRVTSTSYGLSDDMNQAVAIADDTL
VTVEGVRADLDSVTDAAGDCGAPDSATDAFSDFDDYLAGVEEELVAVQNS
GFISLAEQVTDIANETEDWDGVRRGVVWTLLAVCMVGSLGYIGLSFAAVR
WGVTKGGASEWMRREERVERWAHCVVNPCSLIIVIAAWVMAALAITLAAF
SGDFCVDPDAHIVDALDNDPDATYYAGDCTGPNTVLDPVLRGQLLAVENV
PMIIPAVDQVVEFCSDASDSADSLEQGLFSIWQALAEAADLASCRNLNGA
YAEAVYEGLCRDLTAGLTALWVSVVILACCHVFLGLLWSLFNKSKERELA
HLELNAWEDAEREKHQAARAAAPQPDALRAPSAGVDEVAVAGGGVNYGYH
HSAGGPEGHTASYNKPDSPSAYAMDPGQVAAVAAATSRADSNGRRARRAR
DGGNGGGGSYGGGDSMTAAVLEEHNRERGQARVTQGVAMDSVGGSSGGAR
PSEPPPYHAFVPEG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006990	Tweety