prot_S-ischiensis_contig10.1649.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1649.1
Unique Nameprot_S-ischiensis_contig10.1649.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length664
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig10.1649.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.320e-59
Identity = 132/467 (28.27%), Postives = 240/467 (51.39%), Query Frame = 0 
Query:   39 STSSSSFTEDWWIDLAVPNDTYVPAVYEAGNAVDISHNVLGNARDNEYDLDEASYTEGIAYVFSIFMVVGIIACVCIPVGRCCIWRDCCCCECLIPDQVEKVGSE-KWIKW-------LFVFFSLLGLAGTVGAVYGFVNVDEAMSRVTSTSYGLSDDMNQAVAIADDTLVTVEGVRADLDSVTDAAGDC--GAP-DSATDAFSDFDDYLAGVEEELVAVQNSGFISLAEQVTDIANETEDWDGVRRGVVWTLLAVCMVGSLGYIGLSFAAVRWGVTKGGASEWMRREERVERWAHCVVNPCSLIIVIAAWVMAALAITLAAFSGDFCVDPDAHIVDALDNDPDA------TYYAGDCTGPNTVLDPVLRGQLLAVENVPMIIPAVDQVVEFCSDASDSADSLEQGLFSIWQALAEAADLASCRNLNGAYAEAVYEGLCRDLTAGLTALWVSVVILACCHVFLGLLW 488
            +T+S++  + W+  ++V +  Y PA +  G +V+ +H++L   R+N++D+++A Y+ G+  +  +F+V G++                     L   + E++    K+ K        L V  S+  +A   GA++G    D  ++ +   +  ++ DM   + +A+DT V ++ V A  +++ ++   C  GA   S  DAF D +   A V+ E+  V    F  LA+ V  I++   D +G R+G++W +L + ++ +  ++ +S +            E +    R    A C +NPC++ + +  W+ AALA++L+A +GDFC+DPDA+  + + ++ D       TYY GDCT  N  +D ++  Q +AV  +  ++P + Q+   CSD ++   +L+  L S W  L +A +L+SC NLNG Y  AVY+ LC+ L  GL   WVS   L    + L + W
Sbjct:    2 TTTSTTGGDAWYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXXXX----------XXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDNGAILSSLLDAF-DINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTY----------ECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTDGEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQW 447
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0W0_9PHAE2.320e-5928.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 318..480
e-value: 2.0E-11
score: 43.2
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 82..484
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 469..491
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 492..664
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..95
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 304..323
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 351..468
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 324..350
NoneNo IPR availableTMHMMTMhelixcoord: 330..352
NoneNo IPR availableTMHMMTMhelixcoord: 469..491
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3448324..3458255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1649.1mRNA_S-ischiensis_contig10.1649.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 3448323..3458255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1649.1 ID=prot_S-ischiensis_contig10.1649.1|Name=mRNA_S-ischiensis_contig10.1649.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=664bp
ALSSWLPKGPHWRFCEATSRGVMSILGTGAAVVARVLQSTSSSSFTEDWW
IDLAVPNDTYVPAVYEAGNAVDISHNVLGNARDNEYDLDEASYTEGIAYV
FSIFMVVGIIACVCIPVGRCCIWRDCCCCECLIPDQVEKVGSEKWIKWLF
VFFSLLGLAGTVGAVYGFVNVDEAMSRVTSTSYGLSDDMNQAVAIADDTL
VTVEGVRADLDSVTDAAGDCGAPDSATDAFSDFDDYLAGVEEELVAVQNS
GFISLAEQVTDIANETEDWDGVRRGVVWTLLAVCMVGSLGYIGLSFAAVR
WGVTKGGASEWMRREERVERWAHCVVNPCSLIIVIAAWVMAALAITLAAF
SGDFCVDPDAHIVDALDNDPDATYYAGDCTGPNTVLDPVLRGQLLAVENV
PMIIPAVDQVVEFCSDASDSADSLEQGLFSIWQALAEAADLASCRNLNGA
YAEAVYEGLCRDLTAGLTALWVSVVILACCHVFLGLLWSLFNKSKERELA
HLELNAWEDAEREKHQAARAAAPQPDALRAPSAGVDEVAVAGGGVNYGYH
HSAGGPEGHTASYNKPDSPSAYAMDPGQVAAVAAATSRADSNGRRARRAR
DGGNGGGGSYGGGDSMTAAVLEEHNRERGQARVTQGVAMDSVGGSSGGAR
PSEPPPYHAFVPEG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety