prot_S-ischiensis_contig1.1149.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1149.1
Unique Nameprot_S-ischiensis_contig1.1149.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length266
Homology
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BLAST of mRNA_S-ischiensis_contig1.1149.1 vs. uniprot
Match: D8LF16_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF16_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 3.910e-21
Identity = 68/172 (39.53%), Postives = 90/172 (52.33%), Query Frame = 0 
Query:   96 SAEVVHEALPTEWMAEEVAVRQGV----LKPPDPLPAKDAFDLATGLEAVQHFGTHTLAEVVQAVA----------------------------SGPGAAELGLVEGPTCGGVVG---ANWPPPALTAALATVTVKQLMQVMRCDSEPLLQVWMRCFVPLDASARSRARGSL 232
            + ++  EA+ T  + +E+   + V    + PP PLPA  A+DL T LE+VQHF T TLA VVQA A                            +G G+A     EG    G+V    A WPP  LTAAL  VT +Q+   MRCD+EPL+Q+WMRCF P+DA  R++  G L
Sbjct:  548 ACDIFLEAVSTAGLQDELLCNRDVEVLGVDPPRPLPAA-AYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDPLSGARSPRHLAGGGRAGKGSAAKEAREGGVAAGLVEEWEAAWPPRELTAALGLVTARQMAHAMRCDTEPLIQIWMRCFTPVDAKHRTKLWGGL 718
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BLAST of mRNA_S-ischiensis_contig1.1149.1 vs. uniprot
Match: A0A6H5JMZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ7_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 2.620e-19
Identity = 61/142 (42.96%), Postives = 75/142 (52.82%), Query Frame = 0 
Query:  122 PPDPLPAKDAFDLATGLEAVQHFGTHTLAEVVQAVA----------------------------SGPGAAELGLVEGPTCGGVVG---ANWPPPALTAALATVTVKQLMQVMRCDSEPLLQVWMRCFVPLDASARSRARGSL 232
            PP PLPA  A+DL T LE+VQHF T TLA VVQA A                            +G G+      +G    G+V    A WPP  LTAAL  VT +Q+   MRCD+EPL+Q+WMRCF P+DA  R++  G L
Sbjct:   40 PPRPLPAA-AYDLQTALESVQHFATQTLAGVVQAAAVRGSDLYDNDYDSLSGARSPRHLAGGGRAGKGSGAKEARDGGVAAGLVEGWEAAWPPRELTAALGLVTARQMAHAMRCDAEPLIQIWMRCFTPVDAKHRTKLWGGL 180
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LF16_ECTSI3.910e-2139.53PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JMZ7_9PHAE2.620e-1942.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 243..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7810601..7813825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1149.1mRNA_S-ischiensis_contig1.1149.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7810601..7813827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1149.1 ID=prot_S-ischiensis_contig1.1149.1|Name=mRNA_S-ischiensis_contig1.1149.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=266bp
GGGSAGSQLHTSSRLSAPLTLGPLPLRLDPEDARPYWHDSVSTAGGVVAI
ARASPPRASVALNGDGGGGGGGGGRGSGVRTGTGGSFRVPLAEIPSAEVV
HEALPTEWMAEEVAVRQGVLKPPDPLPAKDAFDLATGLEAVQHFGTHTLA
EVVQAVASGPGAAELGLVEGPTCGGVVGANWPPPALTAALATVTVKQLMQ
VMRCDSEPLLQVWMRCFVPLDASARSRARGSLRFRSSARGREDEEDEDDY
EDDEEEEEEEEDEDDD
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