mRNA_S-ischiensis_contig90.20881.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI) HSP 1 Score: 220 bits (561), Expect = 1.370e-62 Identity = 101/183 (55.19%), Postives = 130/183 (71.04%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAAWLERALNGTHPAMGERARHLDLVDGFAAVAHRKMPSKKKKHH 1325
P RW L+GPKRSG+SVH+DPLGTSAWNT++SGRK WVLF P V+K GK VI + E+ +PINYFVD LPRI+R + +K+YE +Q+PG+T++VPGGWWHAVLNL+DSVAITQNFCS NF+ WR TR R M+ + L+ HP++ + AR L+ DGF V ++ HH
Sbjct: 199 PPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNS-IKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDKEHPSLADTARRLNSEDGFVMVDKGASSRRRSGHH 380
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A482T184_9ARCH (JmjC domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T184_9ARCH) HSP 1 Score: 208 bits (529), Expect = 1.010e-58 Identity = 103/175 (58.86%), Postives = 122/175 (69.71%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGFAAVAHRK 1298
P RW LIGP+RSGS+VH+DPLGTSAWNTLISGRKRWVLF P V K V GK VI + E+ + IN+F D LPRIK Y + L+V E IQ GET++VPGGWWH VLNL +VAITQNFCS NFD+ WR+TR R MA WL L THP + RA +++ +GF RK
Sbjct: 186 PPYRWFLIGPERSGSTVHIDPLGTSAWNTLISGRKRWVLFRPGVAKHIVKGKEVIKKGEDDEAINFFTDLLPRIKTTYPD--LEVIEFIQEEGETVFVPGGWWHGVLNLTHTVAITQNFCSYLNFDSVWRETRWSRKKMAVRWLS-GLRETHPVLAARADRINMEEGFLMYDERK 357
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: K3X3W1_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W1_GLOUD) HSP 1 Score: 204 bits (519), Expect = 2.570e-57 Identity = 99/201 (49.25%), Postives = 128/201 (63.68%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGFAAVAHRKMPSKKKKHHVGKREAPGLALVGGELS 1376
P RW L+GPKRSG+ +H+DPLGTSAWNTL+ GRKRWVLF P V K V GKH + E+ + +NYF+D LPRIKR + + L+ EL+Q+PG+TI+VPGGWWHAV N++D+VA+TQNFCSS+NF+ WR TR R MA WL + L HP + A+ L+ D + K K+ GELS
Sbjct: 163 PPYRWFLVGPKRSGTCIHLDPLGTSAWNTLLVGRKRWVLFPPDVPKHVVKGKHHVRPSEDDEAVNYFMDILPRIKRAHPPEMLRCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNFCSSQNFERVWRKTRSGRKRMAVKWLTK-LEKKHPHLAALAKELNAQDNYVMYNKHKGDGDAAGSDTSKKHXXXXXXXEGELS 362
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A8K1CVA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVA6_PYTOL) HSP 1 Score: 203 bits (517), Expect = 2.360e-56 Identity = 93/167 (55.69%), Postives = 121/167 (72.46%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAAWLERALNGTHPAMGERARHLDLVDGF 1277
P RW L+GPKRSG+ VH+DPLGTSAWNTL+ GRKRWVLF P V+KE V GK I + E+ + +NYF+D LPRIK+ + + L+ EL+Q+PG+TI+VPGGWWHAV N++D+VA+TQN+CSS+NF+ WR TR R MA + L HP + A L+ DGF
Sbjct: 206 PPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVLFPPHVSKEIVKGKSHIKKGEDDEAVNYFMDILPRIKKAHSPEELQCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNYCSSQNFERVWRKTRTGRKRMAVKWFQKLQKHHPQLATLAVKLNREDGF 372
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A6V1R424_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R424_HETAK) HSP 1 Score: 203 bits (516), Expect = 3.630e-56 Identity = 95/168 (56.55%), Postives = 118/168 (70.24%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAAWLERALNGTHPAMGERARHLDLVDGFA 1280
P RW L+GPKRSG+SVH+DPLGTSAWNT++SG KRWVLF P K V GKHV+ E+ +PINYFVD LPR+++ + LK E +Q+PGETIYVP WWHAVLNL D++A+TQNFCS +NFD WR +R R M+ R L HP + RA L+ DG+A
Sbjct: 89 PPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGIKRWVLFPPGTAKHVVKGKHVMKSGEDDEPINYFVDFLPRMRK---DVNLKAMEFLQYPGETIYVPCNWWHAVLNLTDTIAVTQNFCSRQNFDGVWRKSRSGRKGMSRRWYRLLEEHHPDLAARAAALNRADGYA 253
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A5D6Y2Y9_9STRA (JmjC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2Y9_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.260e-55 Identity = 97/169 (57.40%), Postives = 121/169 (71.60%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYR-EKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGF 1277
P RW L+GPKRSG+ VHVDPLGTSAWNTL+ GRKRWVLF P V K GK + E+ + +NYF+D LPR+KR + + + EL+Q+PG+TI+VPGGWWHAVLN++DSVA+TQNFCS++NF WR TR+ R MAA WL R L THP + RA L+ D F
Sbjct: 233 PPYRWFLVGPKRSGTCVHVDPLGTSAWNTLLVGRKRWVLFPPDVPKAAAQGKRFVRPGEDDEAVNYFMDILPRLKRAHATDASFRCVELVQYPGDTIFVPGGWWHAVLNVEDSVAVTQNFCSAQNFARVWRKTRVGRKGMAAKWLRR-LALTHPHLVARAHALNAQDHF 400
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A3M6VB54_9STRA (JmjC domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB54_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.960e-54 Identity = 94/168 (55.95%), Postives = 119/168 (70.83%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGF 1277
P RW L+GPKRSG+++H+DPLGTSAWNTLI GRKRWVLF P V K V GK + E+ + +NYF+D LPR+KR + L+ E +Q+PGET+++PGGWWHAV N+DD+VAITQNFCSS+NF WR TR R MAA WL+R L HP + A L+ D +
Sbjct: 265 PPYRWFLVGPKRSGTTLHLDPLGTSAWNTLIVGRKRWVLFPPHVPKHLVNGKRYVRDDEDDEAVNYFMDLLPRLKRACPRETLQCVECMQYPGETVFIPGGWWHAVFNVDDTVAITQNFCSSQNFPAVWRKTRSGRKRMAAKWLKR-LETCHPELVTMAMELNQKDKY 431
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: M4BIS7_HYAAE (JmjC domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIS7_HYAAE) HSP 1 Score: 197 bits (502), Expect = 3.910e-54 Identity = 99/192 (51.56%), Postives = 129/192 (67.19%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGFAAVAHRK----MP-----SKKKKH 1322
P RW L+GPKRSG+++HVDPLGTSAWNTLI GRKRWVLF P + K V GK+ + E+ + +NYF+D LPR+K+ + L+ E +Q PGET+++PGGWWHAVLN+DD+VA+TQNFCSS+NF T WR TR R MA WL+R L +P + A L+ D F + + MP +KKKH
Sbjct: 224 PPYRWFLVGPKRSGTTLHVDPLGTSAWNTLIVGRKRWVLFPPHLPKRLVNGKNHVHGDEDDEAVNYFMDLLPRLKQASSPETLQCVEFMQFPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFPTVWRKTRSSRKRMAVKWLKR-LETHNPELAAMAMKLNQDDKFVMYSKGRRRCEMPPSSSYKRKKKH 414
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A662YDJ8_9STRA (JmjC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDJ8_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.090e-54 Identity = 91/168 (54.17%), Postives = 120/168 (71.43%), Query Frame = 3
Query: 777 PTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGF 1277
P RW L+GPKRSG+++H+DPLG+SAWNTL+ GRKRWVLF P V K V GK + + E+ + +NYF+D LPR+KR + L E +Q+PGET+++PGGWWHAVLN+DD+VA+TQNFCSS+NF T WR TR R MA WL++ L HP + A L+ D +
Sbjct: 218 PPYRWFLVGPKRSGTTLHLDPLGSSAWNTLLVGRKRWVLFPPHVPKGLVNGKKHVRKGEDDEAVNYFMDLLPRLKRASSAETLGCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFATVWRKTRSGRKRMAVKWLKK-LEEQHPELAAMATELNQKDKY 384
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Match: A0A7S1TSI9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSI9_9STRA) HSP 1 Score: 191 bits (485), Expect = 6.320e-54 Identity = 95/181 (52.49%), Postives = 119/181 (65.75%), Query Frame = 3
Query: 738 PRNGHGKAWRETTPTCRWLLIGPKRSGSSVHVDPLGTSAWNTLISGRKRWVLFEPMVNKETVTGKHVISRLENRDPINYFVDQLPRIKRVYREKGLKVYELIQHPGETIYVPGGWWHAVLNLDDSVAITQNFCSSRNFDTCWRDTRLHRPAMAA-WLERALNGTHPAMGERARHLDLVDGF 1277
P + G E P RW L+GPKRSGS VH+DPLGT+AWNT I GRKRWVLF P K V GK VI E+ + INYFVD LPR++R Y + +++ + IQ GET++VP GWWHAVLNLDD++A+TQNFCSS N WR R+ R MA WL + L+ T P + R ++ DGF
Sbjct: 19 PEDLFGLVGEERRPPYRWFLVGPKRSGSCVHIDPLGTAAWNTSIRGRKRWVLFPPGTPKHIVKGKSVIRDGEDDEAINYFVDLLPRMRRRYAGR-IRIIDFIQQEGETVFVPEGWWHAVLNLDDTMAVTQNFCSSVNLPVAWRKCRVERKKMARKWLYK-LDETRPDLARVVRDVNAEDGF 197 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig90.20881.1 >prot_S-ischiensis_contig90.20881.1 ID=prot_S-ischiensis_contig90.20881.1|Name=mRNA_S-ischiensis_contig90.20881.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=259bp MGTPNSRFAMAQGSSSALSGAILMVCAAVSLGSTIAPPYAEDACLHKCLDback to top mRNA from alignment at S-ischiensis_contig90:413842..422504- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig90.20881.1 ID=mRNA_S-ischiensis_contig90.20881.1|Name=mRNA_S-ischiensis_contig90.20881.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8663bp|location=Sequence derived from alignment at S-ischiensis_contig90:413842..422504- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig90:413842..422504- >mRNA_S-ischiensis_contig90.20881.1 ID=mRNA_S-ischiensis_contig90.20881.1|Name=mRNA_S-ischiensis_contig90.20881.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1554bp|location=Sequence derived from alignment at S-ischiensis_contig90:413842..422504- (Schizocladia ischiensis KU_0333)back to top |