mRNA_S-ischiensis_contig90.20879.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: A0A6H5L471_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L471_9PHAE) HSP 1 Score: 106 bits (265), Expect = 5.050e-24 Identity = 63/99 (63.64%), Postives = 70/99 (70.71%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRYKSSERFS 297
DDAV LW +ETR CVLRGEGHGSWV+ VAFD W+ + YYRF SVGEDARLC+WE DE AG +L+ G G XXXXXX G H RYKSSE S
Sbjct: 688 DDAVTLWCVETRTCVLRGEGHGSWVTGVAFDYWTSR-RPYYRFTSVGEDARLCMWEHDEMAG--SLLHGAGXXXXXXXXXXXXXXGFQH-RYKSSENLS 782
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: D7G1Z3_ECTSI (Catabolite repression protein creC n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z3_ECTSI) HSP 1 Score: 101 bits (251), Expect = 3.840e-22 Identity = 48/71 (67.61%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRG 213
DDAV LW +ETR CVLRGEGHGSWV+ VAFD W+ + YYRF SVGEDARLC+WE DE AG +L+ G G
Sbjct: 657 DDAVTLWCVETRTCVLRGEGHGSWVTGVAFDYWTSR-RPYYRFTSVGEDARLCMWEHDEMAG--SLLHGAG 724
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: A0A086SV32_ACRC1 (Catabolite repression protein-like protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086SV32_ACRC1) HSP 1 Score: 82.4 bits (202), Expect = 1.400e-15 Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRY 276
DD + +WS+ A V R +GH SWVS VAFDPW C + YRF SVGED RLCLW+F GV L R R S Q +G + SRY
Sbjct: 446 DDLISIWSMAESALVARCQGHHSWVSAVAFDPWRCD-ERNYRFGSVGEDGRLCLWDF----GVGMLHRPRA-------HSIHQKRGSVSSRY 525
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: UPI0015C36F47 (WD40 repeat n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C36F47) HSP 1 Score: 82.4 bits (202), Expect = 1.410e-15 Identity = 44/92 (47.83%), Postives = 54/92 (58.70%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRY 276
DD + +WS++ A V R +GH SWV+ VAFDPW C ++Y RF SVGED RLCLW+F VS L R R S +G I SRY
Sbjct: 480 DDLISIWSMDDSALVARCQGHQSWVAAVAFDPWRCDGRSY-RFGSVGEDGRLCLWDFS----VSMLHRPR--------AHSVHHRGSISSRY 558
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: A0A5N6KU65_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6KU65_9ROSI) HSP 1 Score: 82.0 bits (201), Expect = 1.740e-15 Identity = 36/57 (63.16%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEF 171
DD V +WS+ RA V R GH SWVS VAFDPW C Q YRFASVGED RL +W+F
Sbjct: 268 DDTVSIWSVTERALVARCNGHKSWVSGVAFDPWRCDDQGNYRFASVGEDCRLLIWDF 324
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: K3UPB6_FUSPC (Uncharacterized protein n=11 Tax=Fusarium TaxID=5506 RepID=K3UPB6_FUSPC) HSP 1 Score: 81.3 bits (199), Expect = 3.510e-15 Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRYKSSER 291
DD + +WSL A V R +GH SWVS VAFDPW C + YRF SVGED RLCLW+F V L R + S + +G + SRY + +R
Sbjct: 440 DDLISIWSLSESALVARCQGHQSWVSAVAFDPWRCD-ERNYRFGSVGEDGRLCLWDFS----VGMLHRPK--------AQSVRHRGSVSSRYTALQR 523
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: S0EEC0_GIBF5 (Probable WD40 repeat protein CreC n=6 Tax=Fusarium TaxID=5506 RepID=S0EEC0_GIBF5) HSP 1 Score: 81.3 bits (199), Expect = 3.570e-15 Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRYKSSER 291
DD + +WSL A V R +GH SWVS VAFDPW C + YRF SVGED RLCLW+F V L R + S + +G + SRY + +R
Sbjct: 439 DDLISIWSLSDSALVARCQGHQSWVSAVAFDPWRCD-ERNYRFGSVGEDGRLCLWDFS----VGMLHRPK--------AQSVRHRGSVSSRYTALQR 522
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: A0A559KR74_FUSOX (Putative catabolite repression protein creC n=73 Tax=Fusarium TaxID=5506 RepID=A0A559KR74_FUSOX) HSP 1 Score: 81.3 bits (199), Expect = 3.590e-15 Identity = 44/97 (45.36%), Postives = 55/97 (56.70%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEAAGVSALVRGRGGXXXXXXVSSSQLQGQIHSRYKSSER 291
DD + +WSL A V R +GH SWVS VAFDPW C + YRF SVGED RLCLW+F V L R + S + +G + SRY + +R
Sbjct: 451 DDLISIWSLSDSALVARCQGHQSWVSAVAFDPWRCD-ERNYRFGSVGEDGRLCLWDFS----VGMLHRPK--------AQSVRHRGSVSSRYTALQR 534
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: A0A7S8CXX0_FUSCU (Uncharacterized protein n=5 Tax=Fusarium TaxID=5506 RepID=A0A7S8CXX0_FUSCU) HSP 1 Score: 80.1 bits (196), Expect = 8.700e-15 Identity = 35/57 (61.40%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEF 171
DD + +WSL A V R +GH SWVS VAFDPW C + YRF SVGED RLCLW+F
Sbjct: 384 DDLISIWSLSESALVARCQGHQSWVSAVAFDPWRCD-ERNYRFGSVGEDGRLCLWDF 439
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Match: C5GTS4_AJEDR (Catabolite repression protein creC n=5 Tax=Blastomyces TaxID=229219 RepID=C5GTS4_AJEDR) HSP 1 Score: 80.1 bits (196), Expect = 9.010e-15 Identity = 36/60 (60.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDARLCLWEFDEA 180
DD V +WSL R V R +GH SWVSCVAFDPW C + YRF SVG+D RL LW+F A
Sbjct: 430 DDLVSIWSLSERKIVARCQGHHSWVSCVAFDPWRCD-ERNYRFGSVGDDCRLLLWDFSVA 488 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig90.20879.1 >prot_S-ischiensis_contig90.20879.1 ID=prot_S-ischiensis_contig90.20879.1|Name=mRNA_S-ischiensis_contig90.20879.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=142bp DDAVVLWSLETRACVLRGEGHGSWVSCVAFDPWSCHAQAYYRFASVGEDAback to top mRNA from alignment at S-ischiensis_contig90:395682..397678+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig90.20879.1 ID=mRNA_S-ischiensis_contig90.20879.1|Name=mRNA_S-ischiensis_contig90.20879.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1997bp|location=Sequence derived from alignment at S-ischiensis_contig90:395682..397678+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig90:395682..397678+ >mRNA_S-ischiensis_contig90.20879.1 ID=mRNA_S-ischiensis_contig90.20879.1|Name=mRNA_S-ischiensis_contig90.20879.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=852bp|location=Sequence derived from alignment at S-ischiensis_contig90:395682..397678+ (Schizocladia ischiensis KU_0333)back to top |