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Homology
BLAST of mRNA_S-ischiensis_contig9.20618.1 vs. uniprot
Match: A0A6H5KGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL2_9PHAE) HSP 1 Score: 170 bits (430), Expect = 3.200e-45 Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = 1
Query: 76 LLVFWILLPALALAAGDAPGEALPRLKPWPAQQDCGGCRGDGPLHPERPAWQGKWIKPGRILFVAVGFYGHMVPLLRLAEEVAARGHHVTFAVHDTARALVEATPGVTFLSAGPWPFSREKLQGRLRKMSSEGSGFRGILTLANDIYLPLASPMYHTLYKALVAP 570
+L+ W++ P LALAA A ++ +L+PWPA+ GC G P +RPAW+ PGRILFV+VGFYGH +PLL LAEE+AARGH+VTFA H+ R +V+ TPGV FLSAG P L+ +LR +S G GF G+LTL ND+YLPLA PMY L A+ P
Sbjct: 9 VLLTWMVFPVLALAAETA---SIGKLRPWPAETVAAGCDGGSPCAWDRPAWRDGRPVPGRILFVSVGFYGHAMPLLSLAEEIAARGHNVTFATHNCLRPMVDETPGVAFLSAGRMPMHDHHLRSKLRSLSQAG-GFWGLLTLLNDVYLPLARPMYRALLSAVQLP 169
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 107.1 |
| Seed ortholog evalue | 1e-20 |
| Seed eggNOG ortholog | 112098.XP_008608037.1 |
| KEGG rclass | RC00005,RC00033,RC00049,RC00059,RC00078,RC00171,RC00397,RC00523,RC00529,RC00708,RC02748 |
| KEGG ko | ko:K00699 |
| KEGG Reaction | R01383,R02358,R02389,R02478,R02502,R02902,R03091,R04352,R04353,R04354,R04683,R07106,R08259,R08261,R08262,R08263,R08615,R09426,R09427,R09428 |
| KEGG Pathway | ko00040,ko00053,ko00140,ko00830,ko00860,ko00980,ko00982,ko00983,ko01100,ko01110,ko05204,map00040,map00053,map00140,map00830,map00860,map00980,map00982,map00983,map01100,map01110,map05204 |
| KEGG Module | M00014,M00129 |
| EggNOG free text desc. | transferase activity, transferring hexosyl groups |
| EggNOG OGs | KOG1192@1,KOG1192@2759 |
| EC | 2.4.1.17 |
| COG Functional cat. | G |
| CAZy | GT1 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003 |
| Hectar predicted targeting category | signal peptide |
| Exons | 2 |
| Model size | 619 |
| Cds size | 618 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817390.1578481-CDS-S-ischiensis_contig9:1991578..1992028 | 1622817390.1578481-CDS-S-ischiensis_contig9:1991578..1992028 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1991579..1992028 + |
| 1695741077.9074137-CDS-S-ischiensis_contig9:1991578..1992028 | 1695741077.9074137-CDS-S-ischiensis_contig9:1991578..1992028 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1991579..1992028 + |
| 1622817390.1703563-CDS-S-ischiensis_contig9:1995705..1995873 | 1622817390.1703563-CDS-S-ischiensis_contig9:1995705..1995873 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1995706..1995873 + |
| 1695741077.9239774-CDS-S-ischiensis_contig9:1995705..1995873 | 1695741077.9239774-CDS-S-ischiensis_contig9:1995705..1995873 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 1995706..1995873 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20618.1 >prot_S-ischiensis_contig9.20618.1 ID=prot_S-ischiensis_contig9.20618.1|Name=mRNA_S-ischiensis_contig9.20618.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=206bp
PPCTPAWRGVWAMFPSNVDRTCIYHLLVFWILLPALALAAGDAPGEALPR
LKPWPAQQDCGGCRGDGPLHPERPAWQGKWIKPGRILFVAVGFYGHMVPL
LRLAEEVAARGHHVTFAVHDTARALVEATPGVTFLSAGPWPFSREKLQGR
LRKMSSEGSGFRGILTLANDIYLPLASPMYHTLYKALVAPTEDAPSAAAA
AAAAEG back to topmRNA from alignment at S-ischiensis_contig9:1991579..1995874+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20618.1 ID=mRNA_S-ischiensis_contig9.20618.1|Name=mRNA_S-ischiensis_contig9.20618.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4296bp|location=Sequence derived from alignment at S-ischiensis_contig9:1991579..1995874+ (Schizocladia ischiensis KU_0333)
CCCCCCTGCACCCCCGCCTGGAGGGGTGTTTGGGCCATGTTCCCTTCGAA
CGTGGACCGAACATGTATTTATCACTTGTTGGTCTTCTGGATCTTGCTGC
CAGCCCTGGCGCTGGCCGCCGGGGACGCTCCGGGGGAGGCCCTTCCCCGC
TTGAAACCCTGGCCCGCGCAACAGGATTGCGGTGGCTGCCGGGGTGACGG
ACCGTTGCACCCGGAGCGTCCGGCATGGCAAGGCAAGTGGATCAAGCCCG
GTCGGATCCTCTTCGTGGCTGTGGGCTTCTACGGCCACATGGTGCCCCTG
CTGCGCCTGGCGGAGGAGGTGGCGGCCCGGGGGCATCACGTGACCTTCGC
GGTGCACGACACGGCCCGCGCCCTCGTGGAGGCGACTCCCGGCGTGACGT
TCCTGAGCGCTGGTCCGTGGCCCTTCTCACGCGAGAAGCTCCAGGGAAGG
GTGAGTCGGCCCTTGTCGGTGGGAACTTGAAAAGGCCGCTGGTCGTCAGT
GATGGAAGGTCGATCAGTATAACCAGTAGTTGTCGGGCTCGACATTTTGT
GGGTGGCATTACTAACTACTTGGATCTAGTGTGGGTCACACTATCGAATA
TTGAGTATCGATATATATATATATATGTATATATATATAGAGAGAGAGAG
ATCAGTACTGTCGATAAATAGGTTGATTTGCGTAGGTTTTCCAACCCTGG
TCTTGGGTGTGGTTGATTAGGGAAATCCTGGGCTAGACCGTGCTGTGTTT
TTGTCACCGGCATCATCAGTCCGTGCATGATTTCATGCAATCGAACGGCG
TCGCGGGTGGTTTGGGCCGCGGTTGCCAGCTCCCCGGAGCGAGGCCGAGC
GGCTGCGGCCACGGGCAAGAGGAATGCCCGTGCCGGCCACATCGCGTTGT
AACATGTGGCTGCTCTCAAATGGCAAGATTTTCTTCCTTCCGGCCGGTCA
TGAATGGACTTAGTTTTGGGTGCCCAGCGGCATGTAGCCCGGCCATGTCA
TGAAAAACAATATATTCGAAGTACTACAGTAGCATCACGAGCCGGGATGG
AGGGGGTCTGGACTTGGCCACCCATCCGCTTCTGGCGGGGGGGTGGCCAC
CCCCTCCCACCCTGGCTCTGCCAGGGGAGGGAGGGGTCCTGCTCCGCCTC
GAACGAGGTGCGGGGTCAATGGTCTCGGGACTACGGCAAGCACCGTGTGA
GTACATATATATATAGCATCACGAGTGAGGGATGGGGGGGGTATGGACTT
GGCCACCCCTCCGCTTCTGGCGGGGGGGTGGCCACGCCCTCCCACCCCGG
CTCTGCCAGGGGAGGGAGGGGTCCTGCTCCGTCTCGACCGAGGCACGGGG
TCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGTACATATACTTCGA
AGTATGGGCTCTGCATGTACGTGCATGTATCGGTCTACCGTAATCGTCGG
AGACATCTTGCCCCCCCATGCCAATTTTCGGGGGAACTTTTCTCGCCGAA
TACTGGCCGGATTCGCGCGGGAAAACTCGGAAAATCTCCCTCAGGACCTG
GGGGAACTTTTCGGAGAGTTTTCGGGACAATTCAGGACCTTTCCCGGTTA
GAAATATTCCCCCGAAAATTGTCCCGTGGGGGCAACATCTCTCCGGCGTT
TGCGGTAGTTCAGGCTGTCAGCCGTGCGCACAGGAGCAAGTACTTCCAAG
CATGTTCAACGACGCTGTTCACGAGCGCGTGCATCCTCTGCAGCATTCGA
GTTTACCTCAAAGCGTTCGATTGGCAATACGCGCACGAGCTTCTGCGGCA
CGCAGTTGGGCAACAACAATCCGAGGCGGCGTTTTGCCTGATATTTCATG
GTATATACTCGAATACTTGTACTCGTAAGATACTTGGTACTTTGAAGTAC
ATATTTTGGCGGTGACACAACATGTTCCTCCCATGTACTTAACCCCTTTA
CCCCCGGGGTCCGCACAATCATAGGGTTTCAGTGTGCAAGTCCAAGCAAG
CAGGGGTGAAAGGGTTAAGTACTGCGGCGCCACGCCGCGTGAAATGATGT
ACTTCGAAGTACTTTGCAGTGATACTCGTAGATATTGTCCCACGCTGTGC
TTCCCGTACGTGTTCCTGAGAACAGGCAATTGGCCGCAGAGTTGTGCAGA
AACCTGCTACAGCACACGCACCTCCCCTTCCCCACACAAATTTCCCTGGC
AAGCTGTAAGGAAGGGCCACTGCTGAGGTCTCTAGTGACGTGGCCCGCGC
CTCGCCGCGCGTTGTTCCTGTTGATACAGCACACGCAATCCTCCCCTGGC
GAGCCAAGGAAGGGCCATTGCTGATGTCTCTAGTGACGTGGCCCGCACCC
CGCACGTGTTTTTCCTGTTACTCGAGTAATACTGCAACTGCAGTGCACTT
GGTTTGGTCCCCAGGTGCTACTTAAGCAGGTGTAGAATAGTGCCGTGGAA
ACGGGTGCGTGTTTCAGTTGTTGTACTCGTAATGCTGAGATTTTCACGCT
CGCCGGGAGTTTTTGGTACGCTGGCGAATCACCCGTGAGCATCCGGCATT
TCCATACGATCAGTTGAGGTATATACTTCGAAGTGTACTACTTCGAAGTA
GTATATGTGTCAGCGGGGCGCAAGCTTTGTAGCGGGGAGCTGAGTTCTCG
CGACCCCCGCCCTGCCGGAATCATCAGCAGCTTGGTGCTACTGGGGCGCT
GGCCAAAGTTGCCAAGAAAAAAGTACAGTAGGGTTCTTCTATGCTACGTA
CCGCAGCAGCACTGTAGTACTTCCGAAGGGCTTACGTACTTTGAAATTTT
TTTTTTGGAACGTAATTTGAAGTAGGTACTGTAGTATTTTCATTGATTGA
CAAGTTCATTTAGTTTTTTGCAAGAAGACAATCAAGTGAGTGGGAAAGAA
GAGGTTTTGCTTTATTGATCAACAATTGTTTGTTTGCTGAGAAGTACTGT
AGTGCTACTGTGCTGTGTTCGTGCTCCGTCTCGACCGAGGCGCGTGGTCA
ATGGTCTTGGGACTACGGCAAGCACCACGTGAGTACATATATATGCTGTG
CACTACATGTAGGTGATCTGCTACCCCAGTACACTTTTTCCGGAAGTACT
TTGAATTCTATTCTGTGAAGTGTTCCTTGGCTTGGCTTGCCGTTCAGTAC
CAGAAAGCAGAAAGCCCTTGGTAGTTGATAGTCCGCTGCCAGTTAAGGGT
TGCAGTGCGTGTGCCATAGCGAACATGCGCGGTGACTAGTTGAAGCGGTT
CAGTATAGTCCTGTATGCACTGATTGGCTCAGTTGTGTTGCGACATGACC
TCTCAACTACTTGTATTTGGGTATCTTGAAACTCAGTCCCCTAACTACTT
GGGTTCTCGAAACTCAAGTTTCCCCAACTACAATATACGGTAGTACGAAG
TACTCGTACTGTATATATGAAGTATATACTCATTGGCTTACAGTAGTTGT
CTCGCGACACATCAGTAGTTGTCTCGCGACACATGTATACTTGCTTCATA
CTTAGCCGACAGCCCTAGGTCGAGTCTTCGGGTCTGCCCTCCGACAGGAG
TAGCTATTTGGCCATGGACTCTCAAATCCCAACTAGGCCGGGATGGAGCA
TGCCGGGTTTGCACCGGCCAGGCCGCGCACTGGCCAAGCCCGGAATGCCA
TTATGGCTTGGCGTCGCCAAGCCGGATGAGGGGCTGCTCGCTAGACTACG
ACGAGGCGTAGCCGTCGGCGAGTATTTGTGAGTCTCTTCGCAGAGTTGTT
CTTGGGCGCACCGGCACCCTCGCGGTCGCGGGAGGAACAACCGGGACTAT
TGATCCCAACCGCTAGGTGGCCGGACAATGCCCCTATGTAGAGTACAGTA
TGTATGTACTCACGTTGTGCTTGCCGTAGCCCCGAGACCATTGACCACGC
GCCTCGATCGAGACGGAGCAGTTATGTACTACAGTCCAGTGTATAGTACG
CCGACGCTCCCCCTGCCTCCCACTTTCCGCCGCGCCCCCCACCCGCCCCA
ACCGCCGGCCGGTCGGCAGCTAAGAAAGATTTCCAGCGAGGGCTCCGGAT
TGTCCCTATGTAGTACAGTACGAGTACAGTGTATAGTACGCCGACGCTCC
CCCCGCCTCTCACTCCCCGGGCGGCAGCTAAGAAAGATGTCCAGCGAAGG
CTCCGGATTCCGCGGCATCCTCACGCTGGCCAACGACATCTACCTCCCGC
TCGCCAGCCCCATGTACCACACCCTGTATAAAGCACTTGTGGCGCCGACA
GAAGACGCCCCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:1991579..1995874+ >mRNA_S-ischiensis_contig9.20618.1 ID=mRNA_S-ischiensis_contig9.20618.1|Name=mRNA_S-ischiensis_contig9.20618.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1236bp|location=Sequence derived from alignment at S-ischiensis_contig9:1991579..1995874+ (Schizocladia ischiensis KU_0333)
CCCCCCTGCACCCCCGCCTGGAGGGGTGTTTGGGCCATGTTCCCTTCGAA
CGTGGACCGAACATGTATTTATCACTTGTTGGTCTTCTGGATCTTGCTGC
CAGCCCTGGCGCTGGCCGCCGGGGACGCTCCGGGGGAGGCCCTTCCCCGC
TTGAAACCCTGGCCCGCGCAACAGGATTGCGGTGGCTGCCGGGGTGACGG
ACCGTTGCACCCGGAGCGTCCGGCATGGCAAGGCAAGTGGATCAAGCCCG
GTCGGATCCTCTTCGTGGCTGTGGGCTTCTACGGCCACATGGTGCCCCTG
CTGCGCCTGGCGGAGGAGGTGGCGGCCCGGGGGCATCACGTGACCTTCGC
GGTGCACGACACGGCCCGCGCCCTCGTGGAGGCGACTCCCGGCGTGACGT
TCCTGAGCGCTGGTCCGTGGCCCTTCTCACGCGAGAAGCTCCAGGGAAGG
CCCCCCTGCACCCCCGCCTGGAGGGGTGTTTGGGCCATGTTCCCTTCGAA
CGTGGACCGAACATGTATTTATCACTTGTTGGTCTTCTGGATCTTGCTGC
CAGCCCTGGCGCTGGCCGCCGGGGACGCTCCGGGGGAGGCCCTTCCCCGC
TTGAAACCCTGGCCCGCGCAACAGGATTGCGGTGGCTGCCGGGGTGACGG
ACCGTTGCACCCGGAGCGTCCGGCATGGCAAGGCAAGTGGATCAAGCCCG
GTCGGATCCTCTTCGTGGCTGTGGGCTTCTACGGCCACATGGTGCCCCTG
CTGCGCCTGGCGGAGGAGGTGGCGGCCCGGGGGCATCACGTGACCTTCGC
GGTGCACGACACGGCCCGCGCCCTCGTGGAGGCGACTCCCGGCGTGACGT
TCCTGAGCGCTGGTCCGTGGCCCTTCTCACGCGAGAAGCTCCAGGGAAGG
CTAAGAAAGATGTCCAGCGAAGGCTCCGGATTCCGCGGCATCCTCACGCT
GGCCAACGACATCTACCTCCCGCTCGCCAGCCCCATGTACCACACCCTGT
ATAAAGCACTTGTGGCGCCGACAGAAGACGCCCCCTCGGCGGCGGCGGCG
GCGGCGGCGGCGGAGGGGCTAAGAAAGATGTCCAGCGAAGGCTCCGGATT
CCGCGGCATCCTCACGCTGGCCAACGACATCTACCTCCCGCTCGCCAGCC
CCATGTACCACACCCTGTATAAAGCACTTGTGGCGCCGACAGAAGACGCC
CCCTCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGG back to top
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