prot_S-ischiensis_contig9.20618.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20618.1
Unique Nameprot_S-ischiensis_contig9.20618.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length206
Homology
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BLAST of mRNA_S-ischiensis_contig9.20618.1 vs. uniprot
Match: A0A6H5KGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL2_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 3.200e-45
Identity = 88/165 (53.33%), Postives = 112/165 (67.88%), Query Frame = 0 
Query:   26 LLVFWILLPALALAAGDAPGEALPRLKPWPAQQDCGGCRGDGPLHPERPAWQGKWIKPGRILFVAVGFYGHMVPLLRLAEEVAARGHHVTFAVHDTARALVEATPGVTFLSAGPWPFSREKLQGRLRKMSSEGSGFRGILTLANDIYLPLASPMYHTLYKALVAP 190
            +L+ W++ P LALAA  A   ++ +L+PWPA+    GC G  P   +RPAW+     PGRILFV+VGFYGH +PLL LAEE+AARGH+VTFA H+  R +V+ TPGV FLSAG  P     L+ +LR +S  G GF G+LTL ND+YLPLA PMY  L  A+  P
Sbjct:    9 VLLTWMVFPVLALAAETA---SIGKLRPWPAETVAAGCDGGSPCAWDRPAWRDGRPVPGRILFVSVGFYGHAMPLLSLAEEIAARGHNVTFATHNCLRPMVDETPGVAFLSAGRMPMHDHHLRSKLRSLSQAG-GFWGLLTLLNDVYLPLARPMYRALLSAVQLP 169
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KGL2_9PHAE3.200e-4553.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2000coord: 78..204
e-value: 5.4E-15
score: 57.7
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..39
score: 0.703
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 85..149
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1991579..1995873 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20618.1mRNA_S-ischiensis_contig9.20618.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1991579..1995874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20618.1 ID=prot_S-ischiensis_contig9.20618.1|Name=mRNA_S-ischiensis_contig9.20618.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=206bp
PPCTPAWRGVWAMFPSNVDRTCIYHLLVFWILLPALALAAGDAPGEALPR
LKPWPAQQDCGGCRGDGPLHPERPAWQGKWIKPGRILFVAVGFYGHMVPL
LRLAEEVAARGHHVTFAVHDTARALVEATPGVTFLSAGPWPFSREKLQGR
LRKMSSEGSGFRGILTLANDIYLPLASPMYHTLYKALVAPTEDAPSAAAA
AAAAEG
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