mRNA_S-ischiensis_contig9.20414.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A6H5KXS9_9PHAE (HSP40 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXS9_9PHAE) HSP 1 Score: 327 bits (838), Expect = 5.080e-105 Identity = 184/354 (51.98%), Postives = 230/354 (64.97%), Query Frame = 3
Query: 183 FFFNGLGSHGPQGAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLE---GGTPPPSDAD--DLLSALFGRAPQSGPRRARDETYQLEVSLEDLCRGRSRRVRVWKQ-KMEGGRAKKVPKELDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRM---GAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLPPKPSFAKSKGATSAGEGVDLAPAEASVAERIKEGTFGDDAR 1217
F F G+ S G VDNE YYK+L V K ADA +I +AYR+LA K HPDKGGDPE+FK L EAYEVLSD EKRR YD+ GK GL+ GGT DL + FGR Q P R RD Y++EV+LE+LC G ++VR+W + +EGGR ++V ++++I + GM TG+R+VM G VD G+ PGDLVFV++ET+H F R+ HL+A+IT+TLAEAL GFVR I L DGRTV++KS+EG V++PG VRKL GCGMPV +K GDLYL F V FPS AW E++R L LLPPKP F K K A V++ PAE SVA R K G + R
Sbjct: 50 FSFGGMPS-GFNTRVDNEGYYKILEVGKTADAGSITKAYRKLAKKKHPDKGGDPEEFKALAEAYEVLSDPEKRRLYDQVGKEGLQAGGGGTGMDQSRQQADLFRSFFGRFSQPQPVRMRDVVYEMEVTLEELCNGGEKKVRIWSEVPLEGGRTERVARDIEISLTAGMTTGTRIVMEGGVDPIEEGIQPGDLVFVLRETRHRTFRRLTGDSPHLTADITVTLAEALTGFVRSISLVDGRTVFFKSKEGEVISPGAVRKLPGCGMPVGERQK---------GDLYLRFVVEFPSEEVSSAWREEERKSLQDLLPPKPKFPKEKPDNPA---VEILPAEPSVASRFKAGLYDKPPR 390
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A835Z5S2_9STRA (Putative molecular chaperone (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S2_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.570e-70 Identity = 137/247 (55.47%), Postives = 166/247 (67.21%), Query Frame = 3
Query: 216 QGAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDK-GGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEG---GTPPPSD--ADDLLSALFGRAP--------------QSGPRRARDETYQLEVSLEDLCRGRSRRVRVWKQKMEGGRAKKV--PKELDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPV----FTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTV 878
+G VDN+ YY LGV KGAD AIK+AYRRLA+K+HPDK GGDPE+FK LGEAY VLSD +KRRTYD+YGKA L+G G+ P S A+D+ SALFG +S PR A D TY+LEV L DL G +RRVRVW QK+ GG V PK++DI IE+GMR G+ VV+ GE D G G+APGDLVFV++E FTR+G HL ++ LTLAEALLGF RP+ DG T+
Sbjct: 5 RGPVDNQGYYDCLGVSKGADDNAIKKAYRRLAVKLHPDKEGGDPERFKELGEAYAVLSDPDKRRTYDQYGKAALDGSGGGSAPQSTDFAEDIFSALFGXXXXXXXXXXXXXXXGFRSAPR-APDATYELEVPLADLYSGATRRVRVWTQKVGGGGGAPVRAPKDVDIVIERGMRAGAAVVLKGEQDPGIPGIAPGDLVFVLREAPPDANGGGFTRVGDHLVVDVELTLAEALLGFCRPLCHLDGTTI 250
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A4D9CTQ4_9STRA (J domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTQ4_9STRA) HSP 1 Score: 219 bits (559), Expect = 3.680e-63 Identity = 134/320 (41.88%), Postives = 185/320 (57.81%), Query Frame = 3
Query: 219 GAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLE------GGTPPPSDADDLLSALFGRAPQ------SGPRRARDETYQLEVSLEDLCRGRSRRVRVWKQKMEGGRAKKVPKELDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLPPKPSFAKSKGATSAGE 1142
G D YY LG+ K + + +KRAYRRL +++HPDKGGD + FK L EAYEVLSD KRR YD YGKAG+E GG P +D+ S+ FG GPRR+ + Q+E++LE+L +G +R+VR+ +QK+ R PK L+ E+GM+ G+R+V+ GE + G APGD+V ++E KHP F R A L E+ +TL EAL GF RP+ DGR ++ K + G V PG V L+G GMPV SL G L++ F V FP + T+++ + L +LP P+F + K A A E
Sbjct: 63 GDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRP-----EDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAE-GLGNAAPGDIVIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLDGRQLWVKGKAGQVTRPGSVWLLEGEGMPVRGEP-----SL--RGRLFIKFAVVFPPSLA--NLTKEEVERLKAVLPKAPAFVRGKEAEEAEE 367
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: K8Z668_NANGC (Molecular chaperone (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8Z668_NANGC) HSP 1 Score: 208 bits (530), Expect = 4.100e-60 Identity = 123/283 (43.46%), Postives = 167/283 (59.01%), Query Frame = 3
Query: 219 GAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLE------GGTPPPSDADDLLSALFGRAPQ------SGPRRARDETYQLEVSLEDLCRGRSRRVRVWKQKMEGGRAKKVPKELDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFP 1031
G D YY LG+ K + + +KRAYRRL +++HPDKGGD + FK L EAYEVLSD KRR YD YGKAG+E GG P +D+ S+ FG GPRR+ + Q+E++LE+L +G +R+VR+ +QK+ R PK L+ E+GM+ G+R+V+ GE + G APGD++ ++E KHP F R A L E+ +TL EAL GF RP+ DGR ++ K + G V PG V L+G GMPV SL G L++ F V FP
Sbjct: 63 GDSDQGGYYATLGIPKTSTLSEVKRAYRRLVVRLHPDKGGDEKAFKALQEAYEVLSDPAKRRLYDAYGKAGVEMGSGAQGGRP-----EDVFSSFFGSGRARGFGGTGGPRRSPNLYLQVELTLEELFKGATRKVRLNRQKVVDRRLVVEPKVLEAAFERGMQDGARLVLAGEAE-GLGNAAPGDIIIQVRELKHPTFVRRNADLLCEMKVTLTEALTGFERPLRHLDGRQLWVKGKAGQVTRPGSVWLLEGEGMPVRGEP-----SL--RGRLFIKFAVVFP 332
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: F0WJP4_9STRA (Uncharacterized protein AlNc14C124G6770 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WJP4_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.250e-56 Identity = 135/375 (36.00%), Postives = 191/375 (50.93%), Query Frame = 3
Query: 183 FFFNGLGSHGPQGA--VDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALF--GRAPQSGPRRARDETYQLEVSLEDL----------------------------------CRGRSRRVRVWK------QKMEGG--------------------RAKKVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLPPKPS 1106
FF G G + VDN ++Y++LGV K A IK++YR+LA+K HPDKGGDPE FK + AYEVLSD EKR YD+YG+ GL+ G +DA DL S F G ++GP++ D T+ L+VSLEDL C+GR RV++ + Q+M+ + KKV KE L++ IEKGMR G R+ GE D A GV PGD++FVI+E +H +F R G +L E ++L E+L GF + DGR ++ K+ G ++ P + ++G GMP H + G L + F ++FP + + TE+ L +LPP PS
Sbjct: 9 FFGGGFDGGGASASKPVDNNKFYEILGVSKTATPTEIKKSYRKLALKNHPDKGGDPELFKHMTVAYEVLSDPEKRELYDQYGEEGLQNGAGG-ADASDLFSQFFKGGSRRRAGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCDGRGGAEGAEKTCDTCQGRGMRVQLRQIGPGMVQQMQSVXXXXXXXXKTIRESDRCKTCKGKKVTKERKVLEVNIEKGMRHGQRITFSGEADQ-APGVLPGDIIFVIQEKEHTIFQRKGGNLIMEKKISLVESLCGFEAIVEHLDGRHLHVKTNPGEIIKPNHFKSIQGEGMPTHGNPFIK-------GQLVIMFKIQFP---ETGSLTEKQLSTLRSVLPPAPS 371
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A2D4BE28_PYTIN (Uncharacterized protein n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BE28_PYTIN) HSP 1 Score: 201 bits (510), Expect = 3.370e-56 Identity = 137/372 (36.83%), Postives = 187/372 (50.27%), Query Frame = 3
Query: 183 FFFNGL--GSHGPQGAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALFGRAPQ--SGPRRARDETYQLEVSLEDL----------------------------------CRGRSRRVRVWK------QKMEGG--------------------RAKKVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLPP 1097
FF G G P VDN +YY+ LGV K A AA IK+AYR+LA+K HPDKGGDPE FK + AYEVLSD+EKR YD+YG+ GL+ G +DA DL S F P+ +GP++ D T+ L+VSLEDL C GR RV++ + Q+M+ + KKV KE L++ IEKGMR G R+ GE D A G PGD++FV++E +H +F R G +L E ++L EAL GF + DGR ++ K+ G ++ P + + G GMP H + G L + F V+FP + +E+ L +LPP
Sbjct: 9 FFGGGFEGGQMPPSKPVDNNKYYETLGVPKNATAADIKKAYRKLALKNHPDKGGDPELFKQITVAYEVLSDQEKRELYDQYGEEGLQNGGGA-ADASDLFSQFFRGGPRRRTGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGRCEGRGGAEGAEKVCDTCHGRGMRVQMRQLGPGMVQQMQSVXXXXXXQGKTIREADRCKACKGKKVTKERKVLEVHIEKGMRHGQRITFAGEADQ-APGTIPGDIIFVVQEKEHSIFQRKGGNLIMEKKISLVEALCGFEMIVEHLDGRHLHVKTRPGEIIKPNQFKAVHGEGMPTHGNPFVK-------GQLVIVFKVQFPESGSL---SEKQLSTLKAVLPP 368
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A485KLS9_9STRA (Aste57867_8971 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLS9_9STRA) HSP 1 Score: 198 bits (504), Expect = 2.680e-55 Identity = 141/370 (38.11%), Postives = 178/370 (48.11%), Query Frame = 3
Query: 189 FNGLGSHGPQGAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALFGRAP-QSGPRRARDETYQLEVSLEDL----------------------------------CRGRSRRVRV---------------------WKQKMEGGRAK-----KVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLP-PKP 1103
F G G GP VDN +Y+ LGV K A AA IK+AYR+LA+K HPDKGGDPE FK + AYE LSD +KR YDKYG+ GL+ G D+ S +FG Q GP+R D T+ L+VSLEDL C GR RV++ K E R K KV KE L++ IEKGMR G R+ GE D A GV GD+VFV++E +H VF R G +L E ++L EAL GF + DGR ++ KS G V+ P + + G GMP H + G L + F V FP+ V T + L + P PKP
Sbjct: 17 FEGHGHGGPSKPVDNTSFYETLGVPKNASAADIKKAYRKLALKNHPDKGGDPELFKNITVAYEALSDPDKRELYDKYGEEGLQQGGGGGHPGADIFSQMFGGGGRQRGPQRGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGGCSGRGGPEGAETSCNTCNGRGMRVQLRQIAPGMVQQVQSVCPDCRGQGKSIREADRCKVCKGNKVTKERKVLEVHIEKGMRHGQRITFKGEADQ-APGVQAGDIVFVVQEKEHSVFQRKGGNLIMEQKISLVEALCGFETIVEHLDGRHLHVKSVAGEVIKPNQFKAVHGEGMPQHGNPFVK-------GQLVILFKVEFPNTV-----TPEQMRTLKTIFPAPKP 373
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A6G0WI73_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WI73_9STRA) HSP 1 Score: 198 bits (503), Expect = 3.240e-55 Identity = 136/363 (37.47%), Postives = 176/363 (48.48%), Query Frame = 3
Query: 210 GPQGAVDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALFGRAPQS-GPRRARDETYQLEVSLEDLCRGRSRRVRVWKQKMEGG------------------------------------------------------------RAKKVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLP-PKP 1103
GP G VDN+ YY+ LGV K A AA IK+AYR+LA+K HPDKGGDPE FK AYEVLSD +KR YDKYG+ GL+ G D+ S +FG ++ GP R D T+ L+VSLEDL G++ ++ V + + GG + KV KE L++ IEKGMR G R+ GE D A G+ GD+VFV++E +H VF R G +L E +TL EAL GF + DGR ++ KS G V+ P + + G GMP H + G L + F V FP V T +L L P PKP
Sbjct: 18 GPSGPVDNDAYYETLGVPKTASAADIKKAYRKLALKNHPDKGGDPELFKNFTVAYEVLSDPDKRELYDKYGEEGLQQGGGGGHPGADIFSQMFGGGMRNRGPARGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCGGCNGRGGPEGAETTXXXXXGRGMRIQMRQIAPGMVQQVQSVCSDCRGQGKTIRESDKCKVCKGNKVTKERKVLEVHIEKGMRNGQRITFKGEADQ-APGLIAGDIVFVVQEKEHSVFQRKGGNLIMEKKITLVEALCGFETIVEHLDGRHLHIKSIAGEVIKPNQFKAVHGEGMPQHGNPFVK-------GQLVILFKVEFPQTV-----TPDQSRLLKSLFPGPKP 367
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: A0A024GQK4_9STRA (Uncharacterized protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024GQK4_9STRA) HSP 1 Score: 203 bits (517), Expect = 5.830e-54 Identity = 136/375 (36.27%), Postives = 191/375 (50.93%), Query Frame = 3
Query: 183 FFFNGLGSHGPQGA--VDNEEYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALF--GRAPQSGPRRARDETYQLEVSLEDL----------------------------------CRGRSRRVRVWK------QKMEG--------------------GRAKKVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFPSRVQVHAWTEQDRDVLAKLLPPKPS 1106
FF G G + VDN ++Y++LGV K A A IK++YR+LA+K HPDKGGDPE FK + AYEVLSD EKR YD+YG+ GL+ G +DA DL S F G ++GP++ D T+ L+VSLEDL C+GR RV++ + Q+M+ KKV KE L++ IEKGMR G R+ GE D A GV PGD++FVI+E +H +F R G +L E ++L E+L GF + DGR ++ K+ G ++ P + ++G GMP H + G L + F ++FP + + TE+ L +LPP PS
Sbjct: 503 FFGGGFDGGGASASKPVDNNKFYEILGVSKTATATEIKKSYRKLALKNHPDKGGDPELFKHMTVAYEVLSDPEKRELYDQYGEEGLQNGAGG-ADASDLFSQFFKGGSRRRTGPQKGEDLTHPLKVSLEDLYNGKTVKLAVNRDVLCSRCDGRGGAEGAEKTCDTCQGRGMRVQLRQIGPGMVQQMQSVXXXXXXXXXXXXXXXXXXXXXGKKVTKERKVLEVNIEKGMRHGQRITFSGEADQ-APGVLPGDIIFVIQEKEHSIFQRKGGNLIMEKKISLVESLCGFEAIVEHLDGRHLHIKTNPGEIIKPNQFKSIQGEGMPTHGNPFIK-------GQLVIMFKIQFP---ESGSMTEKQLSTLRSVLPPAPS 865
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Match: W7TUD3_9STRA (HSP40/DnaJ heat shock protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUD3_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.430e-52 Identity = 136/400 (34.00%), Postives = 193/400 (48.25%), Query Frame = 3
Query: 237 EYYKLLGVEKGADAAAIKRAYRRLAIKMHPDKGGDPEQFKLLGEAYEVLSDKEKRRTYDKYGKAGLEGGTPPPSDADDLLSALFG--RAPQSGPRRARDETYQLEVSLEDLCRGRSRRVRVWKQKMEGG------------------------------------------------------------RAKKVPKE---LDIQIEKGMRTGSRVVMHGEVDAGASGVAPGDLVFVIKETKHPVFTRMGAHLSAEITLTLAEALLGFVRPILLPDGRTVYYKSEEGSVVAPGDVRKLKGCGMPVHASEKEAHESLDPHGDLYLHFHVRFP-SRVQVHAWTEQDRDVLAKLLPPKPSFAKSKGATSAGEGVDLAPAEASVAERIKEGTFGDDAREQEGPHM 1238
E+YK+LGV A+ IK+AYR+LA+K HPDKGGDPE+FK + AYEVLSD EKR+ YD+YGK GLE G+ + +D+ S FG R SGPR+ D + L+V+L+DL G+ + + + K+ G R +KV KE L++ IEKGM+ ++ HGE D A G PGD++F+++E H VFTR L E TLTL EAL+G+ DGR + ++ G ++ PGD+R ++G GMP+H S G L++ F V FP S A + VL + PK T E VDL P +A+ +G+ D+ + G +
Sbjct: 72 EFYKILGVNTDANEGDIKKAYRKLALKNHPDKGGDPEKFKEITMAYEVLSDPEKRKRYDQYGKDGLEEGSM--HNPEDIFSMFFGGGRRGPSGPRKGEDIRHPLKVTLDDLYNGKKCHLAINRDKLCGACEGLGGKKGAERSCSTCNGRGVTVQLRQIGPGMVQQSQMPXXXXXXXXXXXSEKDKCRECRGRKVVKERKLLEVHIEKGMKHNQKITFHGEADE-APGTIPGDIIFLVQEKDHEVFTRKNNDLFMEKTLTLTEALVGYDFLFTHLDGRVIKCGNQPGEIIKPGDIRMVQGEGMPIHGSPFTK-------GRLFIVFKVEFPPSGAFDAAQLKALEAVLPSRVVPK--------VTGEEEEVDLVPVDANQIGAGDDGSAMDEDEDGRGQRV 453 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20414.1 >prot_S-ischiensis_contig9.20414.1 ID=prot_S-ischiensis_contig9.20414.1|Name=mRNA_S-ischiensis_contig9.20414.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=411bp MGRYYPRPFQGAWRAWGLSLVLLLSLSATAQAFDSFSFGGGAGGGGPRFFback to top mRNA from alignment at S-ischiensis_contig9:291072..298600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20414.1 ID=mRNA_S-ischiensis_contig9.20414.1|Name=mRNA_S-ischiensis_contig9.20414.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7529bp|location=Sequence derived from alignment at S-ischiensis_contig9:291072..298600- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:291072..298600- >mRNA_S-ischiensis_contig9.20414.1 ID=mRNA_S-ischiensis_contig9.20414.1|Name=mRNA_S-ischiensis_contig9.20414.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2466bp|location=Sequence derived from alignment at S-ischiensis_contig9:291072..298600- (Schizocladia ischiensis KU_0333)back to top |