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Homology
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: D7FW65_ECTSI (SNRNP27 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW65_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.600e-31 Identity = 86/172 (50.00%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 124 SPPRRHFREAAMPDIPDRGRDAGKAKERGDIRQEES-----TAKEGDGKDSKDTAREEAAALSKAKLQEAREQEKNKLRSRLDLLRQMKGTDMGEEDMDDEPELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 624
SPPRRHFRE D G+DA T E K SK AR AA+ + K+ E +++EK+K++ RL L+RQMKG GEED D +TEEQQMM+LMGF GF +TKG+ V DNQ+G AKGA+SK+K+R+YRQYMNRRGGFNRPL KM
Sbjct: 45 SPPRRHFRE-------DGGKDAAXXXXXXXXXXXXXXXXXXTTSE-TSKPSKQEARRAEAAIKRQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDALGSGSDGDXXXXXLTEEQQMMKLMGFAGFDTTKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 208
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A835ZFB0_9STRA (SNRNP27 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB0_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.330e-22 Identity = 50/61 (81.97%), Postives = 58/61 (95.08%), Query Frame = 1
Query: 442 MTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 624
M+EEQQMMR++GF GF STKG+AV DN+KGAAKGAVSK+K+R+YRQYMNRRGGFNRPLAKM
Sbjct: 162 MSEEQQMMRMLGFGGFDSTKGKAVEDNKKGAAKGAVSKHKERKYRQYMNRRGGFNRPLAKM 222
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S2UPA8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPA8_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.130e-18 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 412 PELDDQDLEEMTEEQQMMRLMGFKG-FSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 627
P++D+ +LE + E++QM L+GF G F++TKG AV DNQK AA GA +KNK R+YRQYMNR+GGFNRPL KMS
Sbjct: 88 PQVDEAELEGLDEDEQMRMLLGFSGSFATTKGTAVEDNQKSAASGAAAKNKARKYRQYMNRKGGFNRPLDKMS 160
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A5D6YFD5_9STRA (SNRNP27 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFD5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.650e-18 Identity = 48/70 (68.57%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 406 DEPELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPL 615
DEP + L +TEE+QM LMGF GF STKG+ V DN KG A GAV K KKRQYRQYMNRRGGFNRPL
Sbjct: 184 DEPPAETNALAHLTEEEQMQALMGFGGFDSTKGKPVEDNAKGVAAGAVGKEKKRQYRQYMNRRGGFNRPL 253
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S3PY04_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY04_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 6.010e-18 Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 415 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 627
E+D+++LE M EE QMM+L+GF GF STK + V DN+ A+G+ +KNK R+YRQYMNR+GGFNRPL KM+
Sbjct: 103 EVDEEELEGMDEEDQMMKLLGFGGFDSTKDKEVEDNKNSLARGSAAKNKARKYRQYMNRKGGFNRPLDKMN 173
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A1E7FWA4_9STRA (SNRNP27 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWA4_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.720e-18 Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 415 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 627
E++ ++LE + EE+QM +LMGF GF STKG++V DNQ AA+G +KNK R+YRQYMNR+ GFNRPL KM+
Sbjct: 129 EVNQEELEGLDEEEQMRKLMGFDGFGSTKGESVEDNQSTAARGGAAKNKARKYRQYMNRKSGFNRPLEKMN 199
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S4JRY6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JRY6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-17 Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 415 ELDDQDLEEMTEEQQMMRLMGFKG-FSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 624
E+D ++L+ + EE QM L+GF G F +TKGQAV DNQK AA+GA +KNK R+YRQYMNR+GGFNRPL KM
Sbjct: 148 EVDREELDGLDEEDQMRMLLGFSGGFGTTKGQAVEDNQKSAARGAAAKNKARKYRQYMNRKGGFNRPLEKM 218
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A8J2S3F1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.510e-17 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 436 EEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPL 615
E+ +EE QM RLMGF GF STKG+ VADNQ GAA+GAV KN+ R YRQYMNRRGGFNRPL
Sbjct: 169 EDDSEEAQMARLMGFGGFGSTKGKEVADNQHGAARGAVKKNQNRSYRQYMNRRGGFNRPL 228
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S2K6S7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6S7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.790e-17 Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 1
Query: 415 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 627
E ++DLE +TEE++MM++MG F STKG+AV DNQ A+KGA +K+K R+YRQYMNR+GGFNRPL KM+
Sbjct: 137 EFTEEDLEGLTEEEKMMKMMGIGVFGSTKGKAVKDNQVSASKGACAKSKARKYRQYMNRKGGFNRPLDKMN 207
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: B8CB98_THAPS (SNRNP27 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB98_THAPS) HSP 1 Score: 85.1 bits (209), Expect = 2.910e-17 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 418 LDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 627
+DD D++ E+ MM+++GF GF STKG+AV DNQ AA+GA SKNK R+YRQYMNR+GGFNRPL KM+
Sbjct: 100 IDDDDVDG-DEQDDMMQMLGFGGFGSTKGKAVQDNQSSAARGAASKNKGRKYRQYMNRKGGFNRPLDKMN 168
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 126.7 |
| Seed ortholog evalue | 1.3e-26 |
| Seed eggNOG ortholog | 2880.D7FW65 |
| Preferred name | SNRNP27 |
| KEGG ko | ko:K12846 |
| KEGG Pathway | ko03040,map03040 |
| KEGG Module | M00354 |
| GOs | GO:0000375,GO:0000377,GO:0000398,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030097,GO:0030154,GO:0030532,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034641,GO:0042386,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0070013,GO:0071011,GO:0071704,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1990904 |
| EggNOG free text desc. | RNA splicing |
| EggNOG OGs | KOG3263@1,KOG3263@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03041 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Domain of unknown function DUF1777 |
| Ec32 ortholog | Ec-01_003560.1 |
| Exons | 5 |
| Model size | 630 |
| Cds size | 630 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817344.5422812-CDS-S-ischiensis_contig85:585919..585954 | 1622817344.5422812-CDS-S-ischiensis_contig85:585919..585954 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 585920..585954 - |
| 1695741043.4844177-CDS-S-ischiensis_contig85:585919..585954 | 1695741043.4844177-CDS-S-ischiensis_contig85:585919..585954 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 585920..585954 - |
| 1622817344.5536432-CDS-S-ischiensis_contig85:586342..586487 | 1622817344.5536432-CDS-S-ischiensis_contig85:586342..586487 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 586343..586487 - |
| 1695741043.4986715-CDS-S-ischiensis_contig85:586342..586487 | 1695741043.4986715-CDS-S-ischiensis_contig85:586342..586487 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 586343..586487 - |
| 1622817344.565532-CDS-S-ischiensis_contig85:587719..587788 | 1622817344.565532-CDS-S-ischiensis_contig85:587719..587788 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 587720..587788 - |
| 1695741043.5133157-CDS-S-ischiensis_contig85:587719..587788 | 1695741043.5133157-CDS-S-ischiensis_contig85:587719..587788 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 587720..587788 - |
| 1622817344.5780108-CDS-S-ischiensis_contig85:589595..589794 | 1622817344.5780108-CDS-S-ischiensis_contig85:589595..589794 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 589596..589794 - |
| 1695741043.533761-CDS-S-ischiensis_contig85:589595..589794 | 1695741043.533761-CDS-S-ischiensis_contig85:589595..589794 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 589596..589794 - |
| 1622817344.5901663-CDS-S-ischiensis_contig85:591010..591192 | 1622817344.5901663-CDS-S-ischiensis_contig85:591010..591192 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 591011..591192 - |
| 1695741043.546145-CDS-S-ischiensis_contig85:591010..591192 | 1695741043.546145-CDS-S-ischiensis_contig85:591010..591192 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig85 591011..591192 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig85.20172.1 >prot_S-ischiensis_contig85.20172.1 ID=prot_S-ischiensis_contig85.20172.1|Name=mRNA_S-ischiensis_contig85.20172.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=210bp
RESGRGRDRNLTGRDRGSDRRRSRSRERGGRGAEGRRSRSRSPPRRHFRE AAMPDIPDRGRDAGKAKERGDIRQEESTAKEGDGKDSKDTAREEAAALSK AKLQEAREQEKNKLRSRLDLLRQMKGTDMGEEDMDDEPELDDQDLEEMTE EQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGG FNRPLAKMS* back to topmRNA from alignment at S-ischiensis_contig85:585920..591192- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig85.20172.1 ID=mRNA_S-ischiensis_contig85.20172.1|Name=mRNA_S-ischiensis_contig85.20172.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5273bp|location=Sequence derived from alignment at S-ischiensis_contig85:585920..591192- (Schizocladia ischiensis KU_0333) CGTGAGAGCGGCCGGGGACGGGACAGGAATCTGACGGGGAGGGACCGTGG
CTCTGATCGACGCCGGAGCAGAAGCCGGGAAAGGGGGGGTCGAGGGGCGG
AAGGGCGGCGCAGCCGGAGCCGGAGTCCACCTCGCCGCCACTTCCGGGAA
GCTGCCATGCCTGACATCCCGGACCGGGGCAGGTACAGTATGCTCTATAG
CAGCTGTCTATTCCGTACCCCGGGTATGCTTTGTGTGGGTGAGGCCCCGT
TGCCACGTACACTAGGTATACCATACAATACAGCACAGTTGATCGAACTA
AAACTGTTGGAAAGAATTGACTTTTCAACCTCCAGCATCTGACCAAGTCG
CCAATTTTGCTGAAAGTGTGGCACCGACAGGTAGGATACATGTTGTGCAA
CAATAGCACTGCGTATCCTTGAGTCATCATGGATGTTTGCCGTGGCCAGT
CCCCAAACTTGCGGCCCCTATTGGGCGGGGAACTTACGTGGCATCAACCT
TGCATTGCACGCAACTGCAGCTACCATTGCCTGTGCGCCTATGTACCAGT
ACATGAATCCCATGACTGTTGCTTCCAGTGAGAGCGATTGCAGCTGGCGC
CGCCAGCAAGGTGCCATGTACGACGCCATCTGTACGGGCGCCCCCCTGAA
ACGAAATATTGCCCAACAGGCACCTCCGTGTCTAGTTATTGCCCACAGCA
CCAATGCGGCCCTAAGCAGGTGGCCTGGTCCTCTCCCAGCCACGACAACA
GAGTCCACCTACTGTAGTGTCCTTGTAGCACATTTAGTGATCTTGGCACA
TAGAGGGGCCGCCGCCCCCCCTTTTCTCACCCTGGCCATGGTGCTCTGTT
CCACTGAGGCACATTTCCGTATGATATTTGGATTTCCGGGGCCCCTTCTC
GGCAACCGTGACGAATTGGACGAAGCCGCTTGTCCAGTGCCACAGAAGAG
GGGTTGGCCACGATACAGTAGTGTGTGCATAGTCCAGTCCCCGGTAGCAA
CCACAAGTCGAGCTCTAATTGCGCCCGTTTTCCCTGCAAGTGCTCTCGTG
CTCTGTTGGTATCCACAGGCAAACTTTTGGGCGTCTGTAGTTTGGTCTCT
ACAGCTTGGTTATGTGGCTGCTGCGCACACAGCTGTACAGTAGTCGTGCA
GCAGTCTCGCGAGCTGTCAATGATTCCTTCGGTGCCACGGGCAAGTTTCA
AACAGAGCGCTTGGCGGAATCCTTCCCGCGTGTCGTACAGGGTGGCTTAT
CTTTGTAATACGTAGTACGTAGTACTCTACTCGTACAAGTTCATGTGCTT
TGATTCGATTCAAAGTGGGTACCCCGGTACAGTCAGGAAAGCGCGATCGA
ATCAGCATTCTTCCTGCCCATGGTCTCCTTCCATTCTGGCCTTTTCAGAG
ATGCCGGCAAGGCCAAGGAACGAGGCGATATCCGTCAGGAGGAGAGTACG
GCCAAGGAAGGAGACGGCAAGGATAGCAAGGACACTGCTCGGGAGGAAGC
AGCGGCCCTTAGTAAGGCCAAGCTGCAGGAGGCCAGGGAGCAAGAGAAAA
ACAAGCTGCGCAGCCGGTTGGACCTGCTGAGGCAGATGAAAGGTACTGTA
CAAAGTTTGGCCAAGTGAAGCCCTTGTACTGTACTGCTGTATACTGCTGT
ACTGTAGCCCCACTTGTCCTACTGTACCAAGTACAACGAAGTACAGCAAT
AGAGTACGTGAAGGGCGTGAGTACACACACAGCACATAGTACAGTAGAGT
CATCTGCTTGCAGAGCTCTGAAGGTTAAAGGTGCGGTGGGCCACAATTAA
CATGGCGACCTGATATATTGTATGTTGTCACTGTCACCCCCGATTTGCGC
TGTACAAGTACAGTAGGTAAGCGCTGTGCGTTGCGATTGCTTCCGTACTT
GTATTGGCTGGAAGTACTTCCAACAACACTGTAGGCGCATTTAGACTTTG
AGATTGGTTTATGCGGTACATATGTGCACGAGTACTATGCTCCCCTTGTT
TCTTCCGAGACTGGTCAGTTACACACTCCTCTACAGGAGTAGCGCTGGTT
CTCCTTGCATAAGTACTTACTGTAGTATAGCATGTGAAACAACTTGTGCT
CAAGAATGCGTGCTGGCCAAGCATGAGGGTCCTATACTACTGTACCACGC
TGCACAAATGCTGGTAGTGAAGCAATTTTTGATGTGGGGTTTTGCTCTTT
GTCCTCACATGTCAATTTTGATGCATGTTGGAGACAGGACAATCGCTGTA
GCGTTTCCAGTCGGTCTCTACTCGTACTGTACGAATACAAGTATTCCTCT
GTCAGACACCATCCTGGGATGTCTTGGATTGACTACATAGTGCTTCGCAC
AGTAATCATCCTAAGGCCTCTGTGTTTCAAGTTTCGGGCACGTCTCGCCC
AAATGTGTGCTGTACATGCTGGCTTGCCTTGCGAAACAACCTGGTCAGCT
GTTGTACCGCCATATTCCAATTACTTCCAAGTAACTACTACAGTACAGTG
CGATTTGACTCACTCATGATACGTCCTTGCCCGGTCGGGACCTGTCGCTC
AACGCCCAAATGCTCTACTACATTGTATTATGTACTACCTACCTACTACC
GTTAACAAGTGCACTACTGTACTACAGTAGTACATGTAAATTCCAGTACT
ACTACTACAGTACCTCCGAGTACTGTATCTGCACTCGTACAGCGAGTACT
TGGCAGCACAATACCATTTGTAGTGCCAGCACACCAGCAACCAGTGCTGT
ACTCCTGCACGTTCCGTTACGCGCTGACTTTGCCGGCGAATGACCGAACA
CGACTGCCCAGTGCGTGCAAAAAGAAAACGGTCGTCTCTGTGGTGGACAA
ACAAAACTCGAATAACAGGAACCCAACGAAGAGATGTCCTCTGGCCAATA
ACTGTGTGTACTCATGCGGGCCAATCGCTCGTCCTGTGCATGCGCTGACT
GGTGACCCAGCCTTCTCCTCCCCCTGACGTAACCACTGTACGGTGCCTGT
ATTGTACGATAGTGTCGGCCAAGCACGTAAGATTCTGTCACAAGACAAGC
CATGGGTACAATGCATGGGCACGGGTACTGCTACTGTTCTGTAGTACAGT
ATAGTAGCATGAATCCAGCCTCATTACAGGTCCGCATTGAGGAGCAAACC
CAACCAGTTTATATCCCAGTTCTTGAAGCGTTAGTTTTAAGTTGGTGTCC
ATCTGCAGGTCCGGCCTTGATCCATCCATGCTCCTTTTCCTCTTGGATTT
CGGAGTCAGAAAAACGGTCCCTTCGTAGAATCTGTTAAATCTGTTTCGTA
TACACGAGCGGCCGAGTACCGTGGTGGCCTGACTCATTGGGTCACCGTAA
GAACATGCGATTGATGGCAGTGGTGTGATGGTGGGTGTCTGATCAGGTGA
TGAGGACATGGGAGAGGAGGATATGGATGATGAACCAGAGCTGGACGACC
AGGACTTGGAGGAGATGACTGAGGTGAGTCATACGATACACTACACACTG
TACAAAACAGTTACAGCTTGCGATGCAGGGCGAGGCCTCATGGGTGAAAT
ACTTGGAAGTACTACTTCTATTGCTCCTGTGGCGGGAGCCTCGCAGTCCC
TTGAATTTCCAGCCATGCCCACCATTGCAACCCTACCAACCCGCGAGAAC
TGCCAGGCATTGAGATACCATAGTTGTACGCTATCCCAACCCTTAAAGAC
TCTGCAATGCCGAGCAACTGCAGCAAAATAAATTTACGGCACTGGTTCTC
ACTGCACGCTTGGAGGCACCCGTCCTCCGAAGCGCTACTGTACGTACTGT
AGTGTTAGCTGGGAATATACTCGAGTATGTATCTTCCAAGTGCACAGGTG
CAGAGCATCAATGGCTAAATTGAATGCTTGTCAGTATGCGTAATTCCAAG
TCATCAAGTAGTTGAACGGCTTGGTGAGGCGTTGCAAGTACTTCAAAGTA
CGTCGAAGTGCGACGTGTTACTCCTGCATACATTGCTGCTGCCGGAGGAC
ATGACAATCTGCGGGCCGACAACCAAGTGCGCCCCAGCTAATGAGTTGAG
GCGTGTCATACTTGAATCTACTTGGAAGTACTCGAGTACATATTTGCTGC
CTATTGCTCCGAGCTGAGAAGAGGTTGCGTGTTCAATCTCCTGCCACTGC
CATACTACTATAGTGCGAGTACTACAGTCCTAGCCTGTCCAACGCACCCC
CCCAAGCAGCACTTTGTGGTCAACCACTGCAATCTAGAATTGTGGAGCGC
ACACGAGTATGGGCAGTTGAGTACGAAAGCCTGATAGGTTTTGTGTCATT
TTGAGGCGAAAGCCAGCCAACGAGCCCGGACATGGCACTTCAAGTTAGAG
ATAGTGTGCACATCTATGGACTGTACTACAGTAGTATTCACAGGAACAAC
ACAGGGCCAGGTGCAGGCCACGTTACTTCTGTAGTACTGACAGGAACACA
GGGCGAGGTGCAGGCCACATCAACAAAGACCTCAACAGTGGCCCTTCCTT
GGCTCGCTAGAGGAGGGGTGTGTGGGGAAGGGGAGGGGGAGAGGGAGGAG
GGGAAGGGTGGAGGAGGAGGAGGAGAAGTGGAGGGGGGTGCGCCCGGGGG
GGGCACGTTAGTAGTACGAGTAGTGCTTCTAAGTGGTACGTTTGACATTC
ACAACTACAATGCTCCACGCGCCTGCGTATGTATCGTTGCCGTGCAATGC
GACAGGAGCAACAAATGATGCGCCTCATGGGATTCAAAGGCTTCTCGTCA
ACCAAAGGCCAAGCTGTGGCTGACAACCAGAAGGGGGCGGCCAAGGGCGC
CGTTTCCAAGAACAAGAAGAGGCAGTACCGACAGTACATGAACCGCAGAG
GTAAGTGCTGTACGTGCGGGGAGCCTATTGACACCTTGCACTGTCCTTTG
GCCTCGCGGAGCTGCATGCAACAAGGTGCCGTGCTCTGCTCTGCATTCTG
AGTGCCGTGGCAGTGCTCCTGCATTGTGCTGCACTTCCAAGTAGTTGATT
GCTCTGCGGGCTTGTTGTAGGTAAGGGGGGGGCTACTACCTACCACCTTG
CACTGTCCTTTGGCCTCGCAGACATGCATGCAAGGCGCCATGCTCTGCAC
TGCATTCTGGGTGCCATGGCAGTGCTCCTGCATTGTGCTGCACTTCCAAG
TAGTTGATTGCTCTGCGGGCTTGTTGTGACAGTCTTGTCTCCCCCCGTGC
CTGCGTGTCCCGTCCTTGCTTGTGCCACTCACTGGCAGGTGGGTTCAACC
GCCCGCTGGCCAAGATGTCGTGA back to topCoding sequence (CDS) from alignment at S-ischiensis_contig85:585920..591192- >mRNA_S-ischiensis_contig85.20172.1 ID=mRNA_S-ischiensis_contig85.20172.1|Name=mRNA_S-ischiensis_contig85.20172.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1260bp|location=Sequence derived from alignment at S-ischiensis_contig85:585920..591192- (Schizocladia ischiensis KU_0333) CGTGAGAGCGGCCGGGGACGGGACAGGAATCTGACGGGGAGGGACCGTGG CTCTGATCGACGCCGGAGCAGAAGCCGGGAAAGGGGGGGTCGAGGGGCGG AAGGGCGGCGCAGCCGGAGCCGGAGTCCACCTCGCCGCCACTTCCGGGAA GCTGCCATGCCTGACATCCCGGACCGGGGCAGCGTGAGAGCGGCCGGGGA CGGGACAGGAATCTGACGGGGAGGGACCGTGGCTCTGATCGACGCCGGAG CAGAAGCCGGGAAAGGGGGGGTCGAGGGGCGGAAGGGCGGCGCAGCCGGA GCCGGAGTCCACCTCGCCGCCACTTCCGGGAAGCTGCCATGCCTGACATC CCGGACCGGGGCAGAGATGCCGGCAAGGCCAAGGAACGAGGCGATATCCG TCAGGAGGAGAGTACGGCCAAGGAAGGAGACGGCAAGGATAGCAAGGACA CTGCTCGGGAGGAAGCAGCGGCCCTTAGTAAGGCCAAGCTGCAGGAGGCC AGGGAGCAAGAGAAAAACAAGCTGCGCAGCCGGTTGGACCTGCTGAGGCA GATGAAAGGTACTAGATGCCGGCAAGGCCAAGGAACGAGGCGATATCCGT CAGGAGGAGAGTACGGCCAAGGAAGGAGACGGCAAGGATAGCAAGGACAC TGCTCGGGAGGAAGCAGCGGCCCTTAGTAAGGCCAAGCTGCAGGAGGCCA GGGAGCAAGAGAAAAACAAGCTGCGCAGCCGGTTGGACCTGCTGAGGCAG ATGAAAGGTACTGACATGGGAGAGGAGGATATGGATGATGAACCAGAGCT GGACGACCAGGACTTGGAGGAGATGACTGAGGACATGGGAGAGGAGGATA TGGATGATGAACCAGAGCTGGACGACCAGGACTTGGAGGAGATGACTGAG GAGCAACAAATGATGCGCCTCATGGGATTCAAAGGCTTCTCGTCAACCAA AGGCCAAGCTGTGGCTGACAACCAGAAGGGGGCGGCCAAGGGCGCCGTTT CCAAGAACAAGAAGAGGCAGTACCGACAGTACATGAACCGCAGAGGAGCA ACAAATGATGCGCCTCATGGGATTCAAAGGCTTCTCGTCAACCAAAGGCC AAGCTGTGGCTGACAACCAGAAGGGGGCGGCCAAGGGCGCCGTTTCCAAG AACAAGAAGAGGCAGTACCGACAGTACATGAACCGCAGAGGTGGGTTCAA CCGCCCGCTGGCCAAGATGTCGTGAGTGGGTTCAACCGCCCGCTGGCCAA GATGTCGTGA back to top
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