prot_S-ischiensis_contig85.20172.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig85.20172.1
Unique Nameprot_S-ischiensis_contig85.20172.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length210
Homology
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: D7FW65_ECTSI (SNRNP27 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW65_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 1.600e-31
Identity = 86/172 (50.00%), Postives = 106/172 (61.63%), Query Frame = 0
Query:   42 SPPRRHFREAAMPDIPDRGRDAGKAKERGDIRQEES-----TAKEGDGKDSKDTAREEAAALSKAKLQEAREQEKNKLRSRLDLLRQMKGTDMGEEDMDDEPELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 208
            SPPRRHFRE       D G+DA                   T  E   K SK  AR   AA+ + K+ E +++EK+K++ RL L+RQMKG   GEED        D     +TEEQQMM+LMGF GF +TKG+ V DNQ+G AKGA+SK+K+R+YRQYMNRRGGFNRPL KM
Sbjct:   45 SPPRRHFRE-------DGGKDAAXXXXXXXXXXXXXXXXXXTTSE-TSKPSKQEARRAEAAIKRQKMLEEQQREKDKVKDRLHLIRQMKGDASGEEDALGSGSDGDXXXXXLTEEQQMMKLMGFAGFDTTKGKGVEDNQRGPAKGAISKHKEREYRQYMNRRGGFNRPLDKM 208          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A835ZFB0_9STRA (SNRNP27 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.330e-22
Identity = 50/61 (81.97%), Postives = 58/61 (95.08%), Query Frame = 0
Query:  148 MTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 208
            M+EEQQMMR++GF GF STKG+AV DN+KGAAKGAVSK+K+R+YRQYMNRRGGFNRPLAKM
Sbjct:  162 MSEEQQMMRMLGFGGFDSTKGKAVEDNKKGAAKGAVSKHKERKYRQYMNRRGGFNRPLAKM 222          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S2UPA8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPA8_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.130e-18
Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 0
Query:  138 PELDDQDLEEMTEEQQMMRLMGFKG-FSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 209
            P++D+ +LE + E++QM  L+GF G F++TKG AV DNQK AA GA +KNK R+YRQYMNR+GGFNRPL KMS
Sbjct:   88 PQVDEAELEGLDEDEQMRMLLGFSGSFATTKGTAVEDNQKSAASGAAAKNKARKYRQYMNRKGGFNRPLDKMS 160          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A5D6YFD5_9STRA (SNRNP27 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YFD5_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.650e-18
Identity = 48/70 (68.57%), Postives = 52/70 (74.29%), Query Frame = 0
Query:  136 DEPELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPL 205
            DEP  +   L  +TEE+QM  LMGF GF STKG+ V DN KG A GAV K KKRQYRQYMNRRGGFNRPL
Sbjct:  184 DEPPAETNALAHLTEEEQMQALMGFGGFDSTKGKPVEDNAKGVAAGAVGKEKKRQYRQYMNRRGGFNRPL 253          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S3PY04_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY04_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.010e-18
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 0
Query:  139 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 209
            E+D+++LE M EE QMM+L+GF GF STK + V DN+   A+G+ +KNK R+YRQYMNR+GGFNRPL KM+
Sbjct:  103 EVDEEELEGMDEEDQMMKLLGFGGFDSTKDKEVEDNKNSLARGSAAKNKARKYRQYMNRKGGFNRPLDKMN 173          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A1E7FWA4_9STRA (SNRNP27 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWA4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.720e-18
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 0
Query:  139 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 209
            E++ ++LE + EE+QM +LMGF GF STKG++V DNQ  AA+G  +KNK R+YRQYMNR+ GFNRPL KM+
Sbjct:  129 EVNQEELEGLDEEEQMRKLMGFDGFGSTKGESVEDNQSTAARGGAAKNKARKYRQYMNRKSGFNRPLEKMN 199          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S4JRY6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JRY6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.170e-17
Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 0
Query:  139 ELDDQDLEEMTEEQQMMRLMGFKG-FSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKM 208
            E+D ++L+ + EE QM  L+GF G F +TKGQAV DNQK AA+GA +KNK R+YRQYMNR+GGFNRPL KM
Sbjct:  148 EVDREELDGLDEEDQMRMLLGFSGGFGTTKGQAVEDNQKSAARGAAAKNKARKYRQYMNRKGGFNRPLEKM 218          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A8J2S3F1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.510e-17
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query:  146 EEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPL 205
            E+ +EE QM RLMGF GF STKG+ VADNQ GAA+GAV KN+ R YRQYMNRRGGFNRPL
Sbjct:  169 EDDSEEAQMARLMGFGGFGSTKGKEVADNQHGAARGAVKKNQNRSYRQYMNRRGGFNRPL 228          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: A0A7S2K6S7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6S7_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.790e-17
Identity = 44/71 (61.97%), Postives = 58/71 (81.69%), Query Frame = 0
Query:  139 ELDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 209
            E  ++DLE +TEE++MM++MG   F STKG+AV DNQ  A+KGA +K+K R+YRQYMNR+GGFNRPL KM+
Sbjct:  137 EFTEEDLEGLTEEEKMMKMMGIGVFGSTKGKAVKDNQVSASKGACAKSKARKYRQYMNRKGGFNRPLDKMN 207          
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Match: B8CB98_THAPS (SNRNP27 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB98_THAPS)

HSP 1 Score: 85.1 bits (209), Expect = 2.910e-17
Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 0
Query:  140 LDDQDLEEMTEEQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGGFNRPLAKMS 209
            +DD D++   E+  MM+++GF GF STKG+AV DNQ  AA+GA SKNK R+YRQYMNR+GGFNRPL KM+
Sbjct:  100 IDDDDVDG-DEQDDMMQMLGFGGFGSTKGKAVQDNQSSAARGAASKNKGRKYRQYMNRKGGFNRPLDKMN 168          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig85.20172.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW65_ECTSI1.600e-3150.00SNRNP27 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835ZFB0_9STRA1.330e-2281.97SNRNP27 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2UPA8_9STRA1.130e-1863.01Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A5D6YFD5_9STRA1.650e-1868.57SNRNP27 domain-containing protein n=1 Tax=Pythium ... [more]
A0A7S3PY04_9STRA6.010e-1860.56Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7FWA4_9STRA7.720e-1860.56SNRNP27 domain-containing protein n=1 Tax=Fragilar... [more]
A0A7S4JRY6_9STRA1.170e-1764.79Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8J2S3F1_9STRA1.510e-1775.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2K6S7_9STRA1.790e-1761.97Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8CB98_THAPS2.910e-1762.86SNRNP27 domain-containing protein n=1 Tax=Thalassi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availablePANTHERPTHR31077FAMILY NOT NAMEDcoord: 6..208
NoneNo IPR availablePANTHERPTHR31077:SF1SMALL NUCLEAR RIBONUCLEOPROTEIN U4/U6.U5 SUBUNIT 27coord: 6..208
IPR013957U4/U6.U5 small nuclear ribonucleoprotein 27kDa proteinPFAMPF08648SNRNP27coord: 150..207
e-value: 7.8E-27
score: 93.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig85contigS-ischiensis_contig85:585920..591192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig85.20172.1mRNA_S-ischiensis_contig85.20172.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig85 585920..591192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig85.20172.1 ID=prot_S-ischiensis_contig85.20172.1|Name=mRNA_S-ischiensis_contig85.20172.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=210bp
RESGRGRDRNLTGRDRGSDRRRSRSRERGGRGAEGRRSRSRSPPRRHFRE
AAMPDIPDRGRDAGKAKERGDIRQEESTAKEGDGKDSKDTAREEAAALSK
AKLQEAREQEKNKLRSRLDLLRQMKGTDMGEEDMDDEPELDDQDLEEMTE
EQQMMRLMGFKGFSSTKGQAVADNQKGAAKGAVSKNKKRQYRQYMNRRGG
FNRPLAKMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013957SNRNP27