mRNA_S-ischiensis_contig8.19463.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: G5AHC7_PHYSP (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AHC7_PHYSP) HSP 1 Score: 81.3 bits (199), Expect = 1.960e-13 Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGASEVSVAVFAGPEGEPVGPEERREASGLYLRLTRSVQEKALA 429
RV VVGAG+AG+ L+ G + + +LEA RIGGR+ T R S L +E GAA++HGT GNPVA+LA E GVELKE++ NPW+ P +S ++ G + EE E L R +Q+ AL+
Sbjct: 7 RVVVVGAGMAGVATANALLASGHFSAEDVCVLEARDRIGGRVYT-RPFSAELRVKVEAGAAWIHGTEGNPVAELAREFGVELKEISARNPWLHP-SSCPGFEIYDG--SRRLSEEEVGETWQWQELLLRKLQKLALS 139
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A3F2RS65_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS65_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.520e-13 Identity = 53/135 (39.26%), Postives = 80/135 (59.26%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGASEVSVAVFAGPEGEPVGPEERREASGLYLRLTRSVQEKA 423
RVAV+GAG+AG++ L+ G + S + +LEA RIGGR+ T S SL +E GAA++HGT GNP A+LA + G+ KE++ NPW+ PG+ + +F + + ++ +E+ RL R QE A
Sbjct: 19 RVAVIGAGLAGVSAANALLSSGRFDASDVCVLEAQSRIGGRVQTKSF-SDSLPVNVEVGAAWIHGTGGNPFAKLAQKFGISFKEISPRNPWLHPGSCP-NFVIFD--DSRELSEQQTKESWEQQERLMRKFQELA 149
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: H3GHR9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR9_PHYRM) HSP 1 Score: 80.5 bits (197), Expect = 3.890e-13 Identity = 55/137 (40.15%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGASEVSVAVFAGPEGEPVGPEERREASGLYLRLTRSVQEKALA 429
RV VVGAG+AG+ + L+ + + +LEA HRIGGR + TR S L +E GAA++HGT GNP+A+L E G+ELKE++ NPW+ P +S ++ G + E E L R +QE AL+
Sbjct: 7 RVVVVGAGMAGVATAKALLASDHFSAEDICVLEAQHRIGGR-IHTRPFSDELPVKVEAGAAWIHGTQGNPMAELVREFGIELKEISARNPWLHP-SSCPGFVIYEG--SRQLTEHEVNETWEWQDSLLRKLQELALS 139
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A662WVK3_9STRA (Amino_oxidase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVK3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 4.950e-13 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1
Query: 1 LDLTEGSHYPRVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGA 306
L++ S Y RVAV+GAG+AG++ T L+ G + S + LLEA RIGGR+ T S +L +E GAA++HGT GNP A+LA + G+ KE++ NPW+ PG+
Sbjct: 9 LEMPLTSSY-RVAVIGAGLAGVSATNALLASGQFGTSDVCLLEAQSRIGGRVHTQSF-SDTLPVNVEVGAAWIHGTEGNPFAKLAQKFGIAFKEISPRNPWLHPGS 112
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A6A3ZL98_9STRA (Amino_oxidase domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZL98_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.500e-12 Identity = 56/137 (40.88%), Postives = 77/137 (56.20%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGASEVSVAVFAGPEGEPVGPEERREASGLYLRLTRSVQEKALA 429
RV VVGAG+AG+ L+ G + + +LEA RIGGR+ T R S L +E GAA++HGT GNPVA+LA + G+ELKE++ NPW+ P + V V +E + L L R +QE AL+
Sbjct: 7 RVVVVGAGMAGLATANALLESGHFSVEDVCVLEAQDRIGGRIYT-RPFSDELPVKVEAGAAWIHGTEGNPVAELARKFGIELKEISARNPWLHPSSCPGFVVYDGSRRLSEVEVDETWQWQELLL---RKLQELALS 139
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A662XUV1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUV1_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.710e-12 Identity = 46/96 (47.92%), Postives = 65/96 (67.71%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGA 306
RVAV+GAG+AG++ T L+ G + S + LLEA RIGGR+ T S +L +E GAA++HGT GNP A+LA + G+ KE++ NPW+ PG+
Sbjct: 506 RVAVIGAGLAGVSATNALLASGHFGASDVCLLEAQSRIGGRVHTQSF-SDTLPVNVEVGAAWIHGTEGNPFAKLAQKFGIAFKEISPRNPWLHPGS 600
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A6A4F487_9STRA (Amine oxidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4F487_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.090e-12 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGA 306
RV V+GAG+AG++ EL+ G + S + +LEA RIGGR+ T S SL +E GAA++HGT GNP A LA + G+ KE++ NPW+ PG+
Sbjct: 18 RVVVIGAGLAGVSAANELLSSGHFDTSDVCVLEAQTRIGGRVQTKSF-SDSLPVNVEVGAAWIHGTEGNPFAALAKQFGISFKEISPRNPWLHPGS 112
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A3R7K870_9STRA (Amine oxidase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K870_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.110e-12 Identity = 45/96 (46.88%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGA 306
RVAV+GAG+AG++ L+ G + S + +LEA RIGGR+ T S SL +E GAA++HGT GNP A+LA + G+ KE++ NPW+ PG+
Sbjct: 19 RVAVIGAGLAGVSAANALLSSGRFDASDVCVLEAQSRIGGRVQTKSF-SDSLPVNVEVGAAWIHGTEGNPFAKLAQKFGISFKEISPRNPWLHPGS 113
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A6H5KT75_9PHAE (PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT75_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 2.530e-12 Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 2
Query: 431 AGAPTRDAVEQILREDPFPRVSSVVQACLRCHLALVGTWMGCSPRELQLAQFVAFAEEEAEQEREEEGDPGRQATDYGDFPGPHAVVLGGMEQLTQAAAGPEVRACLRLGTPVTGVTYNGASRSSQGWAAAAAA 832
A AP RDA+E++L ++PF S A LR + ++ W GC +++QL E E + G Q YGDFPGPH VV GG+E++ + A P+VR CLRL V+ V A + AAAAAA
Sbjct: 95 AEAPARDAIEKLLLDEPFRSFSMPELARLRMRVLMLALWHGCDVQDMQLRSL----------EFENKPFHGGQGV-YGDFPGPHCVVEGGVERIAEVVASPQVRECLRLNARVSRVAIVDAEK-----AAAAAA 212
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: H3GS50_PHYRM (Amine oxidase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GS50_PHYRM) HSP 1 Score: 78.2 bits (191), Expect = 2.800e-12 Identity = 55/145 (37.93%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 31 RVAVVGAGIAGITVTRELMRRG-WPRSSLVLLEATHRIGGRMLTTRLPSGSL---LEEGAAYVHGTTGNPVAQLAAEAGVELKEVALGNPWMSPGASEVSVAVFAGPEGE-PVGPEERREASGLYLRLTRSVQEKALACRSPDER 450
RVA++GAG+AG++ EL+ G + + + +LEA RIGGR+ T S SL +E GAA++HGT GNP A LA + G+ KE++ NPW+ PG S A F +G + ++ +E L R +Q+ A + + D R
Sbjct: 18 RVAIIGAGLAGVSAANELLSSGHFDFNEVCVLEAQSRIGGRVQTKSF-SDSLPVNVEVGAAWIHGTEGNPFATLAKKFGISFKEISPRNPWLHPG----SCANFLLHDGSCQLSEQQTKETWEWQDLLMRKLQKLARSDLADDHR 157 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19463.1 >prot_S-ischiensis_contig8.19463.1 ID=prot_S-ischiensis_contig8.19463.1|Name=mRNA_S-ischiensis_contig8.19463.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=159bp MGCSPRELQLAQFVAFAEEEAEQEREEEGDPGRQATDYGDFPGPHAVVLGback to top mRNA from alignment at S-ischiensis_contig8:1600441..1603690+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19463.1 ID=mRNA_S-ischiensis_contig8.19463.1|Name=mRNA_S-ischiensis_contig8.19463.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3250bp|location=Sequence derived from alignment at S-ischiensis_contig8:1600441..1603690+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:1600441..1603690+ >mRNA_S-ischiensis_contig8.19463.1 ID=mRNA_S-ischiensis_contig8.19463.1|Name=mRNA_S-ischiensis_contig8.19463.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=954bp|location=Sequence derived from alignment at S-ischiensis_contig8:1600441..1603690+ (Schizocladia ischiensis KU_0333)back to top |