prot_S-ischiensis_contig8.19463.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19463.1
Unique Nameprot_S-ischiensis_contig8.19463.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length159
Homology
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BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Match: A0A6H5KT75_9PHAE (PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT75_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 6.430e-5
Identity = 30/58 (51.72%), Postives = 37/58 (63.79%), Query Frame = 0 
Query:   38 YGDFPGPHAVVLGGMEQLTQAAAGPEVRACLRLGTPVTGVTYNGASRSSQGWAAAAAA 95
            YGDFPGPH VV GG+E++ +  A P+VR CLRL   V+ V    A +     AAAAAA
Sbjct:  160 YGDFPGPHCVVEGGVERIAEVVASPQVRECLRLNARVSRVAIVDAEK-----AAAAAA 212
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KT75_9PHAE6.430e-551.72PAO protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:1602207..1603690 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19463.1mRNA_S-ischiensis_contig8.19463.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 1600441..1603690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19463.1 ID=prot_S-ischiensis_contig8.19463.1|Name=mRNA_S-ischiensis_contig8.19463.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=159bp
MGCSPRELQLAQFVAFAEEEAEQEREEEGDPGRQATDYGDFPGPHAVVLG
GMEQLTQAAAGPEVRACLRLGTPVTGVTYNGASRSSQGWAAAAAAATVSV
LSSTATPSSDTNAFEDRDENAAQGGALESTPGRARGEGGSRGEAAAVAAA
AASGAPRHG
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