mRNA_S-ischiensis_contig8.19305.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig8.19305.1
Unique NamemRNA_S-ischiensis_contig8.19305.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: D7FUI9_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI9_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 2.170e-95
Identity = 159/289 (55.02%), Postives = 183/289 (63.32%), Query Frame = 1
Query:   25 EGTLSGGSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEPDWAVAVRVSQE------------------------EGQEDGREPA-------------------------TPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
            E     G  RGSC FNLTLINRME S AKRDLKPDPLF MGKCSVSWHADSCLQDFSTIGVYHCT P  AEPDW +A+RVS E                        +  E G +PA                         TPPLL+PL+SG+ Y+LL DFNH HEHAVV+GSS+LRYSSTHRV+  +GNTF+ V++RCE  L G    +               +LAQVRAEQ LLT +E EW+NQFWVQGRRHA LHPWWRGPM L++ATWRELERRT+  +  L+
Sbjct:  279 EEVREAGGERGSCAFNLTLINRMECSGAKRDLKPDPLFSMGKCSVSWHADSCLQDFSTIGVYHCTDPVPAEPDWGIALRVSTEARVGGDGXXXXXXXXXSNDEKTRRKEAERGLKPAGPKAVASVAASAAEAVPEKQGEQVLTPPLLIPLQSGDAYFLLDDFNHFHEHAVVSGSSTLRYSSTHRVADTDGNTFSHVQKRCEQALAGGGSAAAGGDDQI-------LNLAQVRAEQALLTELESEWLNQFWVQGRRHASLHPWWRGPMALVLATWRELERRTSLTVQHLM 560          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A835ZL97_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL97_9STRA)

HSP 1 Score: 245 bits (626), Expect = 2.800e-71
Identity = 131/257 (50.97%), Postives = 154/257 (59.92%), Query Frame = 1
Query:   43 GSNRGSCKFNLTLINRME----GSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP-----------------DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLLGP 750
            G + GS  FNLTLINRME    G      LKP+P+FGMGK SVSWHADSCL+D+STIGVYH T P                      DW        E     G E  TPPL++PLRSG+ Y++L DFNH+HEH V+AG  +LRYSSTHRVS  EGNT+A +  RC  VL  +A  +                LAQ+RAEQ L T +EGEW+ QFW QGRRHA LHPWWR PM  LV  WRELERR+   ++ LL P
Sbjct:  154 GHSPGSFDFNLTLINRMEPSGHGDGYHAKLKPEPIFGMGKASVSWHADSCLEDYSTIGVYHVTTPXXXXXXXXXXXXXXXXXXXXXADWKAVASAKAE-----GEEVVTPPLVVPLRSGDAYFMLDDFNHYHEHLVLAGEDTLRYSSTHRVSVREGNTWAQISGRCREVLSVSAPTAP------------ALPLAQLRAEQALQTELEGEWLYQFWAQGRRHARLHPWWRRPMNALVRWWRELERRSHAAVTHLLSP 393          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A7S2RU45_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU45_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.470e-59
Identity = 107/229 (46.72%), Postives = 144/229 (62.88%), Query Frame = 1
Query:   55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPA----------------AAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEG-AAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLV 690
            G  +FNLTLIN+ME ++ ++ L+ +PLFGMGKCSVSWHADS LQDFSTI VYH T P                 A   DW + +RV+ ++         TPP+ LP RSG++Y+LL DFNHHH+HAV++GS   RYSSTHRV+ EEG+T+  + RRC  +LEG A+++                +LA  R+EQ LL  +E EW+ Q+++QG+ HA LH WW  PM  L+
Sbjct:  174 GPTRFNLTLINQMEPTQVEKALRDEPLFGMGKCSVSWHADSGLQDFSTIAVYHSTEPPREGASRGGKSKWMKGNAHLDDWRIGLRVADDD--------VTPPVALPTRSGDLYFLLDDFNHHHQHAVLSGSCR-RYSSTHRVAREEGHTWKYIHRRCTKLLEGFASLRHSSTATSPGTRETRAVNLASARSEQVLLDEVEFEWVRQWYIQGQTHADLHVWWHEPMQQLL 393          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A024TSQ8_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSQ8_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.970e-52
Identity = 103/237 (43.46%), Postives = 141/237 (59.49%), Query Frame = 1
Query:   58 SCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP--------DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
            SC++NLTLIN ME       LK DP +GMGK SVSWHADS L+D+S+IGVYH   P+            DW +A+R+S +     G +  TPPL+LP   G++YYL GDFNH H+H V++G++ +R SSTHRV+    +T   ++ +  A L+ + V+S          R        VRAEQ  +T +E EWI Q+W+QG +H  LH  W+ PM  L A+WR+LE RT   +  LL
Sbjct:  211 SCEYNLTLINYMEPDNPLLGLKEDPTYGMGKVSVSWHADSSLEDYSSIGVYHTLLPSKPAKKGTKVGVCDWRIAMRLSPDV---PGAK-TTPPLVLPTGDGDVYYLNGDFNHFHQHMVLSGTA-VRVSSTHRVAVTAEDTLQFIQAKVSAALQSSTVQSVPNDADVACRR---GHADAVRAEQATITTLEMEWIRQYWIQGAKHNDLHVDWQHPMAALEASWRKLEARTKTLVGALL 439          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: B8BV54_THAPS (Alpha-ketoglutarate-dependent dioxygenase FTO (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV54_THAPS)

HSP 1 Score: 188 bits (478), Expect = 2.460e-52
Identity = 94/229 (41.05%), Postives = 139/229 (60.70%), Query Frame = 1
Query:   55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRL 741
            GS ++NLTL+N+M  +  KRDLK +  + MGK SV WH DS L+DFS+I VY   +  A    W VA+R    +G   G   + P LL+PL SG +YY+  DFNH+HEHAV+AGS  +RYSSTHRV+ E   T+  +R + + VL+ +   +          +     +A VR +Q L+  +E EW+ Q++VQG +HA LHP+W  P+ +L  ++  +E+R+   L R+
Sbjct:  237 GSAEYNLTLVNKMASTTMKRDLKNEMAYNMGKISVGWHRDSGLKDFSSIAVYQTLKDTATANSWGVAIRAM--DGGTGGPLASVPALLVPLPSGSLYYMFDDFNHNHEHAVIAGSDGVRYSSTHRVAREGAGTWQYIRDKTKQVLDASTKFNSSEKTCQASKKTFEKFVAHVRLQQLLMNEVEFEWLRQWYVQGSKHASLHPYWHQPIEVLCDSYSNMEQRSVDLLVRM 463          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: D7FUK2_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK2_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.450e-50
Identity = 111/265 (41.89%), Postives = 146/265 (55.09%), Query Frame = 1
Query:   43 GSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAA--------------AEP-DWAVAVRVSQE-EGQEDG------------REPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLLGPA 753
            G+  GSC+FN+ LINRME S+ + DLK +P FG  +CSVSWHADSCL+ +S+I VYH T P A              A P DW +A+RV  + EG   G            R    P + + L S   Y+LL DFNHHH+HAV+AG S  R+SSTHRV+ ++G++F  +  RC  VL     ++                L Q + EQ  L  +E EWI QF+VQGR H  LH WW GP+  L+  W  LE +TA  ++ L G A
Sbjct:  213 GNEFGSCEFNVALINRMEPSDDRPDLKLEPTFGQDRCSVSWHADSCLEHYSSIAVYHVTDPEAKNKNADADGGDGSPAVPADWRIALRVEPDAEGPSAGKLKLAATEDKSSRVDRAPAVAVALPSRSAYFLLDDFNHHHQHAVLAGQSH-RWSSTHRVAKKQGHSFDYISGRCRTVLGDGHRRT----------------LKQWKTEQLTLAELEFEWIRQFYVQGRAHHALHSWWHGPLQELLRFWSLLEAKTAVVVNTLQGAA 460          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A6G0WHV1_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHV1_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.620e-50
Identity = 101/231 (43.72%), Postives = 135/231 (58.44%), Query Frame = 1
Query:   61 CKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHC---TRPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
            C +NLTLIN ME       LK DP + MGK SVSWHADS LQD+S+IGVYH     +   A  DW +A+R+S E          TPPL+LP   G++YYL GDFNH H+H V+AG++ +R SSTHRV+  + +T   ++ R    L+ +A  +               ++  VR EQ  LTV+E +WI Q+W+QG +H  LH  W+GPM  L A+W  LE RT   +  LL
Sbjct:  203 CDYNLTLINYMEPDNPMLGLKADPTYDMGKVSVSWHADSSLQDYSSIGVYHSLLGNKKKKAPCDWRIAMRLSPEVPG----AATTPPLVLPTDGGDVYYLNGDFNHFHQHMVLAGTA-VRVSSTHRVAVTDEDTLQYIQGRVARALKSSANGNSPFRDG---------EVDAVREEQATLTVVEMDWIRQYWIQGVKHDELHTDWQGPMRKLEASWLVLEERTKTLVDALL 419          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A485KA16_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KA16_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.950e-50
Identity = 98/233 (42.06%), Postives = 133/233 (57.08%), Query Frame = 1
Query:   61 CKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP-----DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
            C++NLTLIN ME       LK DP +GMGK SVSWHADS LQD+S+IGVYH   P   +      DW +A+R+S E    D     TPPL+LP   G+ YYL GDFNH H+H V++G++ +R SSTHRV+  + +T   ++ R +  +  +  K+               +   VR EQ  +T +E +WI Q+W+QG +H  LH  W+ PM  L   WR LE RT   +  LL
Sbjct:  207 CEYNLTLINYMEPDNPLLGLKDDPTYGMGKVSVSWHADSSLQDYSSIGVYHTLLPTKQKQPKTRCDWRIALRLSPEVPGAD----QTPPLVLPTDDGDAYYLNGDFNHFHQHMVLSGTA-VRVSSTHRVAVTDEDTLQYIQARVKTAVVSSESKTPFRLD----------EAEHVRVEQATITTVEMDWIRQYWIQGAKHDELHVDWQAPMQKLEGQWRLLEGRTKTLVDALL 424          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: W4FQR0_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQR0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.690e-48
Identity = 98/233 (42.06%), Postives = 136/233 (58.37%), Query Frame = 1
Query:   58 SCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP----DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
            SC++NLTLIN ME       LK D  + MGK SVSWHADS L+DFS+IGVYH   P         DW +A+R+S +     G +  TPPL++P   G++YYL GDFNHHH+H V++G++ +R SSTHRV+    +T   ++ +  A L+ +A             R    D   VR EQ  +T +E +W+ Q+W+QG +H  LH  W+ PM  L A+WR+LE RT      L+
Sbjct:   56 SCEYNLTLINYMEPDNPVLGLKDDLTYDMGKVSVSWHADSSLEDFSSIGVYHTLLPTKKSKKGPCDWRIAMRLSPDV---PGAK-TTPPLVVPTGDGDVYYLNGDFNHHHQHMVLSGTA-VRVSSTHRVAVTAEDTLQYIQAKVTAALKSSA------KDPQDKCRRGHAD--DVRHEQTTVTTLEMDWLRQYWIQGDKHNDLHVDWQQPMLALEASWRKLEARTKTLADALV 275          
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A7S4S7H4_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7H4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.930e-48
Identity = 105/257 (40.86%), Postives = 142/257 (55.25%), Query Frame = 1
Query:   55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCT-----------------------RPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAV----KSXXXXXXXXXXRLACFDLA----------QVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELER 714
            GS  + LTLINRME +  KRDLK + LFG+GK SVSWH DS LQDFS+I VYH                         + +     W VA+RV+ E   +      TP L +PL  G +YYLL DFNH  EHAV++GS+ LRYSSTHRV+ E   T+  +R +C++VL          S          ++   DL+          +VRA Q+L+T IE EW+ Q+ +QG+RHA LHP+W  P+  L  ++++LER
Sbjct:  292 GSADYTLTLINRMEPTSIKRDLKNENLFGLGKTSVSWHKDSGLQDFSSIAVYHTILQDEGNNRYDRDYEYDNKSLKNGKGSQNNTPWRVALRVADENNAK------TPALAVPLPGGSLYYLLDDFNHTREHAVLSGSNQLRYSSTHRVAREGCGTWQYIRDKCDSVLSSCRYIIMSASSTAVPEKRDSKVKESDLSTAKRKKMMVKEVRAHQQLITEIEFEWLRQWCIQGQRHARLHPFWHRPIERLQESYKQLER 542          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUI9_ECTSI2.170e-9555.02Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A835ZL97_9STRA2.800e-7150.97Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S2RU45_9STRA5.470e-5946.72Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A024TSQ8_9STRA1.970e-5243.46Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
B8BV54_THAPS2.460e-5241.05Alpha-ketoglutarate-dependent dioxygenase FTO (Fra... [more]
D7FUK2_ECTSI1.450e-5041.89Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A6G0WHV1_9STRA2.620e-5043.72Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A485KA16_9STRA3.950e-5042.06Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
W4FQR0_9STRA3.690e-4842.06Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S4S7H4_9STRA3.930e-4840.86Alpha-ketoglutarate-dependent dioxygenase FTO n=4 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:451565..454481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score305.1
Seed ortholog evalue3.1e-80
Seed eggNOG ortholog2880.D7FUI9
Preferred nameFTO
KEGG koko:K19469
GOsGO:0001659,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009888,GO:0009987,GO:0010883,GO:0016070,GO:0016491,GO:0016604,GO:0016607,GO:0016705,GO:0016706,GO:0031974,GO:0031981,GO:0032451,GO:0032501,GO:0032502,GO:0032879,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035516,GO:0035552,GO:0035553,GO:0040008,GO:0040014,GO:0042127,GO:0042245,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043576,GO:0043734,GO:0044057,GO:0044065,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045595,GO:0045598,GO:0046483,GO:0046872,GO:0046914,GO:0048513,GO:0048638,GO:0048731,GO:0048856,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051213,GO:0051239,GO:0051716,GO:0055114,GO:0060612,GO:0061448,GO:0065007,GO:0065008,GO:0070013,GO:0070344,GO:0070350,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0090335,GO:0140097,GO:0140098,GO:1901360,GO:1905952,GO:1990931
EggNOG free text desc.RNA N6-methyladenosine dioxygenase activity
EggNOG OGs28IRR@1,2QR31@2759
EC1.14.11.53
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons4
Model size763
Cds size759
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19305.1prot_S-ischiensis_contig8.19305.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig8 451565..454479 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817273.4354434-CDS-S-ischiensis_contig8:451564..4516601622817273.4354434-CDS-S-ischiensis_contig8:451564..451660Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 451565..451660 +
1695740985.8911238-CDS-S-ischiensis_contig8:451564..4516601695740985.8911238-CDS-S-ischiensis_contig8:451564..451660Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 451565..451660 +
1622817273.44755-CDS-S-ischiensis_contig8:452186..4524551622817273.44755-CDS-S-ischiensis_contig8:452186..452455Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 452187..452455 +
1695740985.9061985-CDS-S-ischiensis_contig8:452186..4524551695740985.9061985-CDS-S-ischiensis_contig8:452186..452455Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 452187..452455 +
1622817273.4610353-CDS-S-ischiensis_contig8:453829..4541121622817273.4610353-CDS-S-ischiensis_contig8:453829..454112Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 453830..454112 +
1695740985.921474-CDS-S-ischiensis_contig8:453829..4541121695740985.921474-CDS-S-ischiensis_contig8:453829..454112Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 453830..454112 +
1622817273.472196-CDS-S-ischiensis_contig8:454368..4544791622817273.472196-CDS-S-ischiensis_contig8:454368..454479Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 454369..454479 +
1695740985.9355621-CDS-S-ischiensis_contig8:454368..4544791695740985.9355621-CDS-S-ischiensis_contig8:454368..454479Schizocladia ischiensis KU_0333CDSS-ischiensis_contig8 454369..454479 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig8.19305.1

>prot_S-ischiensis_contig8.19305.1 ID=prot_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=253bp
RGGGGGGGEGTLSGGSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGK
CSVSWHADSCLQDFSTIGVYHCTRPAAAEPDWAVAVRVSQEEGQEDGREP
ATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGN
TFADVRRRCEAVLEGAAVKSGGGGGSSGGGRLACFDLAQVRAEQELLTVI
EGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLLGP
AAG
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mRNA from alignment at S-ischiensis_contig8:451565..454481+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig8.19305.1 ID=mRNA_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2917bp|location=Sequence derived from alignment at S-ischiensis_contig8:451565..454481+ (Schizocladia ischiensis KU_0333)
CGAGGCGGAGGAGGAGGAGGAGGAGAGGGGACCTTGTCGGGGGGCTCGAA CCGGGGCAGCTGCAAGTTCAACCTCACGTTGATCAACCGCATGGAGGTCA GTCCCGCCGGCATTCACTCGGCGGTTTGTGCCCCAGGGTTTGGGCAGAAT TCAGTCAATACTTAGCCCTTTTACCCCTGGGGTCCGTATAGTCATAGGGT TTTAATGTGTAAGTCCAATTTAGCAGGGGTAAAAGGGTTAGTCTTTGCCG TGTTCTGGCGGTCCTGAGGGCCCTGGGGCAGATGGAGTTGGCGGCCTACT TTAAATGTGCGGCGCAGGCGGCCCCACCTGGCCCTGCCCTGGAGGCCCGG CCCTGCTTCCTTCTGTCCGTGAAACGCACCTGCTCCCTACTCCCTGCCAG CCGGGTGACTTTCGCGGCCTTTCGACTGGCTCCTACAACAACGACCGAAA ACAAACGTGGCTGGCATCATCGGCATGAAACAGGGCTCGGAGGGTGAAGC GCGACCTCAAGGCCGACCCGCTCTTCGGCTCGGGCAAGTGCTCAATCGTA TATAATGACCGAAAAGAAAAGAAAAGTTTTGAAGTTGAAACTTGACATGG CCGCCATCGGCACGAAAAACAGGGCTCGGAGGCGAAGCGCGACCTCAAGC CCGACCCGCTCTTCGGCATGGGCAAGTGCTCCGTGAGCTGGCACGCGGAC TCCTGCCTACAGGACTTCTCCACCATCGGGGTGTACCACTGCACGCGCCC GGCCGCCGCCGAGCCGGACTGGGCGGTGGCGGTACGGGTGTCGCAGGAGG AGGGGCAGGAGGACGGAAGGGAGCCGGCCACACCCCCGCTGCTGCTGCCG CTGAGGAGCGGGGAGATGTACTATTTGCTGGGCGACTTCAAGTGAGAGAG GCGTCGTGTGTGTTTGTCTATGCTTGGGGAGTATGTACTTCGAAGTACAG TACTCGGAGTGTGTAGTGTAGTGTAGTGCACTGTGTGCACTGTACTGTAG TAGGAGCGGGGAGACGTACTACTAGTAGTACCTGCTGGGCGACTTCAGGT GAGAGAGGTGTCGTGTGTGTGTGTGTGTGTCTATTGGTACTGGGGGAGTA TGCACTCTGAAGTACAGTACTCCGGTGTGCAGTGTACTGTACTGTACTGG TGTGCACTGGCCTGTAGGAGGAGCGGGGAGATGTACTACTGTACCTGCTG GGTGACTTCAAGTGAGAGACGCGTCGTGTGTGTGTGTGTGTGTATTTGGG GAGTATGTACAGTCTCCGAGTGTGTAGTGTACTGTACTGTACTGTGCTGG ACGATTGCAAGTGAGAGGTGTGTCGTCTGTGTGTGGGGGGGGGAGTGTGT GCAGTACTCCGAGTGTAGTGTACTGTACTGTGCTGTGCTGGACGACTGCA AGTGAGAGGGGTGTCGTCTGTGTGTGTGTGTGTCTGTACTTGGGGAGTAT GTGCAGTGCTCCGAGTGTGTAGTGTAGTGTACTGTACTGTACTGTACTGT ACTGGGCAACTTCAAGCGAGAGAGGTGTCGTGTCGTGGCCGGGTGGCCTC TGTGTGTGTGTGTGTGATCTATACTTGGGGAGTGTGTACAGTACTCCAAG TGTGTTGTGTACTGTACTGTACTGTACTGGTGTGCACTGTACTGCAGTGT ACTGACTGTGCTGTGGTCTGGTCAATGGTCTCGGGACTACGGCAAGCACA ATGTGAGTACATATATATCGTAAGGGAACGGTGACTTTCCCCTGGTGGCA AAACCCCCGCCTCCCCTCCCCCCCCTGCAAACCCCCCCACACGCCTGCAT TGACTAAGTAGCTATCGCACGAACGAAGGCTCATTCCTCCCCCCGATGGG CAATCTCCCGCCGCCCCTTCGCCCCACCCCCTCTCCCCCCGAAACCCCTC TCTCCCGTGCGCGTGCGTCTCGGCCCGCTCTGCCCGCCCACCAGTGGTGG AATATCGATCAGTAGATGCAGCAGTTATCGGGGTCGACTGATTTCGTGGG TGGCGTTGCGAACTACTTGGATTTAGTGCGGGTCAAACTACCGAATGTGA TTATCGATAGATATATGAGAAGGGCTTCTGGTGAGGTCCCCACCTTAGGT TGTTGGGACGGGGCCCGGAACTCGCATTCATCCAAATAATTTAAAATCAG TACACGGCCCGGAACTCGCCCCTTGTCTACCACTCAAAATGGATCAGTAC TGTCGATAAGTAGGTTGATTTGCTTAGATATTCCATCACTGCCGCCCGCC CCCCCGCCTGCCTAGCCACCACCACGAGCACGCCGTGGTCGCCGGGTCCT CCAGCCTCCGATACTCCTCCACGCACCGGGTCTCAAGCGAGGAGGGCAAC ACCTTTGCCGACGTGCGGCGGCGGTGCGAGGCCGTCTTGGAGGGGGCTGC TGTCAAATCGGGGGGCGGCGGCGGCAGCAGCGGCGGCGGCCGTTTGGCGT GCTTTGACCTGGCGCAGGTCCGGGCGGAGCAGGAGCTGCTCACGGTGATT GAGGGGGAGTGGATCAACCAGTTCTGGGTGCAGGGGAGGCGCCATGCGGT GAGGCGCGTGGGAGGAATGCGTCGTGTGCACGTGCTAACTTACCGCCACC GCTGCCTCGGCCGGTGTTGTCCGAGGCCGCCTTTCTGGTGTGGTGCTACT GGCGTACTGTGAAGTACTTTACTACTTCGAAGTAGTAGTACTGTACTTCA ACTGGCTCAATCAATCGCTTGTTTGTCTTGTTGCACATGCGCCTGCCACA TGCCAACACACACACACACACACAGAAATACACGCGCTTGCTGCCTGCCC GCAGTGGCTGCACCCCTGGTGGCGCGGGCCCATGGGTCTCCTAGTGGCAA CATGGCGGGAGCTGGAGAGGCGTACTGCCCAATTCTTAAGCAGACTGCTG GGGCCAGCGGCGGGGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig8:451565..454481+

>mRNA_S-ischiensis_contig8.19305.1 ID=mRNA_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1518bp|location=Sequence derived from alignment at S-ischiensis_contig8:451565..454481+ (Schizocladia ischiensis KU_0333)
CGAGGCGGAGGAGGAGGAGGAGGAGAGGGGACCTTGTCGGGGGGCTCGAA
CCGGGGCAGCTGCAAGTTCAACCTCACGTTGATCAACCGCATGGAGCGAG
GCGGAGGAGGAGGAGGAGGAGAGGGGACCTTGTCGGGGGGCTCGAACCGG
GGCAGCTGCAAGTTCAACCTCACGTTGATCAACCGCATGGAGGGCTCGGA
GGCGAAGCGCGACCTCAAGCCCGACCCGCTCTTCGGCATGGGCAAGTGCT
CCGTGAGCTGGCACGCGGACTCCTGCCTACAGGACTTCTCCACCATCGGG
GTGTACCACTGCACGCGCCCGGCCGCCGCCGAGCCGGACTGGGCGGTGGC
GGTACGGGTGTCGCAGGAGGAGGGGCAGGAGGACGGAAGGGAGCCGGCCA
CACCCCCGCTGCTGCTGCCGCTGAGGAGCGGGGAGATGTACTATTTGCTG
GGCGACTTCAAGGCTCGGAGGCGAAGCGCGACCTCAAGCCCGACCCGCTC
TTCGGCATGGGCAAGTGCTCCGTGAGCTGGCACGCGGACTCCTGCCTACA
GGACTTCTCCACCATCGGGGTGTACCACTGCACGCGCCCGGCCGCCGCCG
AGCCGGACTGGGCGGTGGCGGTACGGGTGTCGCAGGAGGAGGGGCAGGAG
GACGGAAGGGAGCCGGCCACACCCCCGCTGCTGCTGCCGCTGAGGAGCGG
GGAGATGTACTATTTGCTGGGCGACTTCAACCACCACCACGAGCACGCCG
TGGTCGCCGGGTCCTCCAGCCTCCGATACTCCTCCACGCACCGGGTCTCA
AGCGAGGAGGGCAACACCTTTGCCGACGTGCGGCGGCGGTGCGAGGCCGT
CTTGGAGGGGGCTGCTGTCAAATCGGGGGGCGGCGGCGGCAGCAGCGGCG
GCGGCCGTTTGGCGTGCTTTGACCTGGCGCAGGTCCGGGCGGAGCAGGAG
CTGCTCACGGTGATTGAGGGGGAGTGGATCAACCAGTTCTGGGTGCAGGG
GAGGCGCCATGCGCCACCACCACGAGCACGCCGTGGTCGCCGGGTCCTCC
AGCCTCCGATACTCCTCCACGCACCGGGTCTCAAGCGAGGAGGGCAACAC
CTTTGCCGACGTGCGGCGGCGGTGCGAGGCCGTCTTGGAGGGGGCTGCTG
TCAAATCGGGGGGCGGCGGCGGCAGCAGCGGCGGCGGCCGTTTGGCGTGC
TTTGACCTGGCGCAGGTCCGGGCGGAGCAGGAGCTGCTCACGGTGATTGA
GGGGGAGTGGATCAACCAGTTCTGGGTGCAGGGGAGGCGCCATGCGTGGC
TGCACCCCTGGTGGCGCGGGCCCATGGGTCTCCTAGTGGCAACATGGCGG
GAGCTGGAGAGGCGTACTGCCCAATTCTTAAGCAGACTGCTGGGGCCAGC
GGCGGGGTGGCTGCACCCCTGGTGGCGCGGGCCCATGGGTCTCCTAGTGG
CAACATGGCGGGAGCTGGAGAGGCGTACTGCCCAATTCTTAAGCAGACTG
CTGGGGCCAGCGGCGGGG
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