mRNA_S-ischiensis_contig8.19305.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: D7FUI9_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI9_ECTSI) HSP 1 Score: 303 bits (777), Expect = 2.170e-95 Identity = 159/289 (55.02%), Postives = 183/289 (63.32%), Query Frame = 1
Query: 25 EGTLSGGSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEPDWAVAVRVSQE------------------------EGQEDGREPA-------------------------TPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
E G RGSC FNLTLINRME S AKRDLKPDPLF MGKCSVSWHADSCLQDFSTIGVYHCT P AEPDW +A+RVS E + E G +PA TPPLL+PL+SG+ Y+LL DFNH HEHAVV+GSS+LRYSSTHRV+ +GNTF+ V++RCE L G + +LAQVRAEQ LLT +E EW+NQFWVQGRRHA LHPWWRGPM L++ATWRELERRT+ + L+
Sbjct: 279 EEVREAGGERGSCAFNLTLINRMECSGAKRDLKPDPLFSMGKCSVSWHADSCLQDFSTIGVYHCTDPVPAEPDWGIALRVSTEARVGGDGXXXXXXXXXSNDEKTRRKEAERGLKPAGPKAVASVAASAAEAVPEKQGEQVLTPPLLIPLQSGDAYFLLDDFNHFHEHAVVSGSSTLRYSSTHRVADTDGNTFSHVQKRCEQALAGGGSAAAGGDDQI-------LNLAQVRAEQALLTELESEWLNQFWVQGRRHASLHPWWRGPMALVLATWRELERRTSLTVQHLM 560
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A835ZL97_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL97_9STRA) HSP 1 Score: 245 bits (626), Expect = 2.800e-71 Identity = 131/257 (50.97%), Postives = 154/257 (59.92%), Query Frame = 1
Query: 43 GSNRGSCKFNLTLINRME----GSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP-----------------DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLLGP 750
G + GS FNLTLINRME G LKP+P+FGMGK SVSWHADSCL+D+STIGVYH T P DW E G E TPPL++PLRSG+ Y++L DFNH+HEH V+AG +LRYSSTHRVS EGNT+A + RC VL +A + LAQ+RAEQ L T +EGEW+ QFW QGRRHA LHPWWR PM LV WRELERR+ ++ LL P
Sbjct: 154 GHSPGSFDFNLTLINRMEPSGHGDGYHAKLKPEPIFGMGKASVSWHADSCLEDYSTIGVYHVTTPXXXXXXXXXXXXXXXXXXXXXADWKAVASAKAE-----GEEVVTPPLVVPLRSGDAYFMLDDFNHYHEHLVLAGEDTLRYSSTHRVSVREGNTWAQISGRCREVLSVSAPTAP------------ALPLAQLRAEQALQTELEGEWLYQFWAQGRRHARLHPWWRRPMNALVRWWRELERRSHAAVTHLLSP 393
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A7S2RU45_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU45_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.470e-59 Identity = 107/229 (46.72%), Postives = 144/229 (62.88%), Query Frame = 1
Query: 55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPA----------------AAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEG-AAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLV 690
G +FNLTLIN+ME ++ ++ L+ +PLFGMGKCSVSWHADS LQDFSTI VYH T P A DW + +RV+ ++ TPP+ LP RSG++Y+LL DFNHHH+HAV++GS RYSSTHRV+ EEG+T+ + RRC +LEG A+++ +LA R+EQ LL +E EW+ Q+++QG+ HA LH WW PM L+
Sbjct: 174 GPTRFNLTLINQMEPTQVEKALRDEPLFGMGKCSVSWHADSGLQDFSTIAVYHSTEPPREGASRGGKSKWMKGNAHLDDWRIGLRVADDD--------VTPPVALPTRSGDLYFLLDDFNHHHQHAVLSGSCR-RYSSTHRVAREEGHTWKYIHRRCTKLLEGFASLRHSSTATSPGTRETRAVNLASARSEQVLLDEVEFEWVRQWYIQGQTHADLHVWWHEPMQQLL 393
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A024TSQ8_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSQ8_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.970e-52 Identity = 103/237 (43.46%), Postives = 141/237 (59.49%), Query Frame = 1
Query: 58 SCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP--------DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
SC++NLTLIN ME LK DP +GMGK SVSWHADS L+D+S+IGVYH P+ DW +A+R+S + G + TPPL+LP G++YYL GDFNH H+H V++G++ +R SSTHRV+ +T ++ + A L+ + V+S R VRAEQ +T +E EWI Q+W+QG +H LH W+ PM L A+WR+LE RT + LL
Sbjct: 211 SCEYNLTLINYMEPDNPLLGLKEDPTYGMGKVSVSWHADSSLEDYSSIGVYHTLLPSKPAKKGTKVGVCDWRIAMRLSPDV---PGAK-TTPPLVLPTGDGDVYYLNGDFNHFHQHMVLSGTA-VRVSSTHRVAVTAEDTLQFIQAKVSAALQSSTVQSVPNDADVACRR---GHADAVRAEQATITTLEMEWIRQYWIQGAKHNDLHVDWQHPMAALEASWRKLEARTKTLVGALL 439
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: B8BV54_THAPS (Alpha-ketoglutarate-dependent dioxygenase FTO (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BV54_THAPS) HSP 1 Score: 188 bits (478), Expect = 2.460e-52 Identity = 94/229 (41.05%), Postives = 139/229 (60.70%), Query Frame = 1
Query: 55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRL 741
GS ++NLTL+N+M + KRDLK + + MGK SV WH DS L+DFS+I VY + A W VA+R +G G + P LL+PL SG +YY+ DFNH+HEHAV+AGS +RYSSTHRV+ E T+ +R + + VL+ + + + +A VR +Q L+ +E EW+ Q++VQG +HA LHP+W P+ +L ++ +E+R+ L R+
Sbjct: 237 GSAEYNLTLVNKMASTTMKRDLKNEMAYNMGKISVGWHRDSGLKDFSSIAVYQTLKDTATANSWGVAIRAM--DGGTGGPLASVPALLVPLPSGSLYYMFDDFNHNHEHAVIAGSDGVRYSSTHRVAREGAGTWQYIRDKTKQVLDASTKFNSSEKTCQASKKTFEKFVAHVRLQQLLMNEVEFEWLRQWYVQGSKHASLHPYWHQPIEVLCDSYSNMEQRSVDLLVRM 463
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: D7FUK2_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK2_ECTSI) HSP 1 Score: 187 bits (475), Expect = 1.450e-50 Identity = 111/265 (41.89%), Postives = 146/265 (55.09%), Query Frame = 1
Query: 43 GSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAA--------------AEP-DWAVAVRVSQE-EGQEDG------------REPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLLGPA 753
G+ GSC+FN+ LINRME S+ + DLK +P FG +CSVSWHADSCL+ +S+I VYH T P A A P DW +A+RV + EG G R P + + L S Y+LL DFNHHH+HAV+AG S R+SSTHRV+ ++G++F + RC VL ++ L Q + EQ L +E EWI QF+VQGR H LH WW GP+ L+ W LE +TA ++ L G A
Sbjct: 213 GNEFGSCEFNVALINRMEPSDDRPDLKLEPTFGQDRCSVSWHADSCLEHYSSIAVYHVTDPEAKNKNADADGGDGSPAVPADWRIALRVEPDAEGPSAGKLKLAATEDKSSRVDRAPAVAVALPSRSAYFLLDDFNHHHQHAVLAGQSH-RWSSTHRVAKKQGHSFDYISGRCRTVLGDGHRRT----------------LKQWKTEQLTLAELEFEWIRQFYVQGRAHHALHSWWHGPLQELLRFWSLLEAKTAVVVNTLQGAA 460
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A6G0WHV1_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHV1_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.620e-50 Identity = 101/231 (43.72%), Postives = 135/231 (58.44%), Query Frame = 1
Query: 61 CKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHC---TRPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
C +NLTLIN ME LK DP + MGK SVSWHADS LQD+S+IGVYH + A DW +A+R+S E TPPL+LP G++YYL GDFNH H+H V+AG++ +R SSTHRV+ + +T ++ R L+ +A + ++ VR EQ LTV+E +WI Q+W+QG +H LH W+GPM L A+W LE RT + LL
Sbjct: 203 CDYNLTLINYMEPDNPMLGLKADPTYDMGKVSVSWHADSSLQDYSSIGVYHSLLGNKKKKAPCDWRIAMRLSPEVPG----AATTPPLVLPTDGGDVYYLNGDFNHFHQHMVLAGTA-VRVSSTHRVAVTDEDTLQYIQGRVARALKSSANGNSPFRDG---------EVDAVREEQATLTVVEMDWIRQYWIQGVKHDELHTDWQGPMRKLEASWLVLEERTKTLVDALL 419
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A485KA16_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KA16_9STRA) HSP 1 Score: 181 bits (458), Expect = 3.950e-50 Identity = 98/233 (42.06%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 61 CKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP-----DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
C++NLTLIN ME LK DP +GMGK SVSWHADS LQD+S+IGVYH P + DW +A+R+S E D TPPL+LP G+ YYL GDFNH H+H V++G++ +R SSTHRV+ + +T ++ R + + + K+ + VR EQ +T +E +WI Q+W+QG +H LH W+ PM L WR LE RT + LL
Sbjct: 207 CEYNLTLINYMEPDNPLLGLKDDPTYGMGKVSVSWHADSSLQDYSSIGVYHTLLPTKQKQPKTRCDWRIALRLSPEVPGAD----QTPPLVLPTDDGDAYYLNGDFNHFHQHMVLSGTA-VRVSSTHRVAVTDEDTLQYIQARVKTAVVSSESKTPFRLD----------EAEHVRVEQATITTVEMDWIRQYWIQGAKHDELHVDWQAPMQKLEGQWRLLEGRTKTLVDALL 424
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: W4FQR0_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQR0_9STRA) HSP 1 Score: 172 bits (436), Expect = 3.690e-48 Identity = 98/233 (42.06%), Postives = 136/233 (58.37%), Query Frame = 1
Query: 58 SCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCTRPAAAEP----DWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAVKSXXXXXXXXXXRLACFDLAQVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELERRTAQFLSRLL 744
SC++NLTLIN ME LK D + MGK SVSWHADS L+DFS+IGVYH P DW +A+R+S + G + TPPL++P G++YYL GDFNHHH+H V++G++ +R SSTHRV+ +T ++ + A L+ +A R D VR EQ +T +E +W+ Q+W+QG +H LH W+ PM L A+WR+LE RT L+
Sbjct: 56 SCEYNLTLINYMEPDNPVLGLKDDLTYDMGKVSVSWHADSSLEDFSSIGVYHTLLPTKKSKKGPCDWRIAMRLSPDV---PGAK-TTPPLVVPTGDGDVYYLNGDFNHHHQHMVLSGTA-VRVSSTHRVAVTAEDTLQYIQAKVTAALKSSA------KDPQDKCRRGHAD--DVRHEQTTVTTLEMDWLRQYWIQGDKHNDLHVDWQQPMLALEASWRKLEARTKTLADALV 275
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Match: A0A7S4S7H4_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7H4_9STRA) HSP 1 Score: 178 bits (452), Expect = 3.930e-48 Identity = 105/257 (40.86%), Postives = 142/257 (55.25%), Query Frame = 1
Query: 55 GSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKCSVSWHADSCLQDFSTIGVYHCT-----------------------RPAAAEPDWAVAVRVSQEEGQEDGREPATPPLLLPLRSGEMYYLLGDFNHHHEHAVVAGSSSLRYSSTHRVSSEEGNTFADVRRRCEAVLEGAAV----KSXXXXXXXXXXRLACFDLA----------QVRAEQELLTVIEGEWINQFWVQGRRHAWLHPWWRGPMGLLVATWRELER 714
GS + LTLINRME + KRDLK + LFG+GK SVSWH DS LQDFS+I VYH + + W VA+RV+ E + TP L +PL G +YYLL DFNH EHAV++GS+ LRYSSTHRV+ E T+ +R +C++VL S ++ DL+ +VRA Q+L+T IE EW+ Q+ +QG+RHA LHP+W P+ L ++++LER
Sbjct: 292 GSADYTLTLINRMEPTSIKRDLKNENLFGLGKTSVSWHKDSGLQDFSSIAVYHTILQDEGNNRYDRDYEYDNKSLKNGKGSQNNTPWRVALRVADENNAK------TPALAVPLPGGSLYYLLDDFNHTREHAVLSGSNQLRYSSTHRVAREGCGTWQYIRDKCDSVLSSCRYIIMSASSTAVPEKRDSKVKESDLSTAKRKKMMVKEVRAHQQLITEIEFEWLRQWCIQGQRHARLHPFWHRPIERLQESYKQLER 542 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig8.19305.1 >prot_S-ischiensis_contig8.19305.1 ID=prot_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=253bp RGGGGGGGEGTLSGGSNRGSCKFNLTLINRMEGSEAKRDLKPDPLFGMGKback to top mRNA from alignment at S-ischiensis_contig8:451565..454481+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig8.19305.1 ID=mRNA_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2917bp|location=Sequence derived from alignment at S-ischiensis_contig8:451565..454481+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig8:451565..454481+ >mRNA_S-ischiensis_contig8.19305.1 ID=mRNA_S-ischiensis_contig8.19305.1|Name=mRNA_S-ischiensis_contig8.19305.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1518bp|location=Sequence derived from alignment at S-ischiensis_contig8:451565..454481+ (Schizocladia ischiensis KU_0333)back to top |