mRNA_S-ischiensis_contig73.18620.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: D8LKU2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU2_ECTSI) HSP 1 Score: 264 bits (674), Expect = 3.950e-78 Identity = 133/233 (57.08%), Postives = 163/233 (69.96%), Query Frame = 2
Query: 125 VDAAVALLSDNYRAELGATSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATGSLE----------GANTTGLAALPLHAEVALQVFDLSLRDSEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQEARQQAANQSWPEPTLPEGVTSVPGFPGAGTYGAALYLAECLAR 793
V A LL +NYR EL AT PS +D Q ST S++V+ AWAHVDQ RARAE LSIF GQ E+GLVPT R++ GY+A +LGG+ LPGPG W S + GANT+ LAA+PLHAE AL++FDLS RD+EARLWLQ FP LF++H YLH R DP TGLVYV+HPWET + DS LW LL +AR QA +SW P +P V+SV GFPG + AA++L++C AR
Sbjct: 59 VQGAAGLLLENYRDELEATIPSPLIDAHQESTTSVMVAEAWAHVDQQRARAELLSIFRGQWENGLVPTVRYAPGYEADFLGGSFLPGPGGWGGRSSDKNASSAQSAGGANTSSLAAIPLHAEAALRIFDLSPRDAEARLWLQDLFPALFRYHDYLHGSRNDPETGLVYVHHPWETEVSADSALWPSLLADARAQATKESWVPPPIPSSVSSVAGFPGKKAFQAAIFLSDCSAR 291
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A4D9DAW9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAW9_9STRA) HSP 1 Score: 154 bits (390), Expect = 8.890e-39 Identity = 95/229 (41.48%), Postives = 131/229 (57.21%), Query Frame = 2
Query: 125 VDAAVALLSDNYRAELGATSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQRE-DGLVPTARFSRGYD-APYLGGTLLPGPGAWAT---GSLEGANTTGLAALPLHAEVALQVFDLSLRDSEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQEARQQAANQSWPEPTLP-EGVTSVPGFPGAGTYGAALYLAECLAR 793
+D A LL N+ AE G T PS P+ ST+SL ++A+A D E ++ GQ GLVP RF + + +L GT PGP W T GS +T GLAALP HA VA+Q+F++ RD +L Q FP +FK+H+YLHT R D + LV+ YHPWE+ LP DSP+W L +++ A ++W P +P + + PG+PG +G LYL E +AR
Sbjct: 34 LDKAKTLLLTNFDAEQGWTVPSKATAPYLDSTSSLFTAYAYAKFDPDAGMKELIACLSGQWPFTGLVPRIRFPPSSEGSAWLEGTYYPGPAQWQTPRDGSAAALSTAGLAALPWHAIVAMQLFNVR-RDDAGLSFLAQVFPPIFKYHQYLHTSR-DAKNHLVFSYHPWESELPGDSPVWSAALAATKERVAAEAW-SPRVPLDEPAAAPGYPGDDVFGPELYLVELMAR 259
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A7S2SBS2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBS2_9STRA) HSP 1 Score: 110 bits (274), Expect = 2.070e-23 Identity = 88/264 (33.33%), Postives = 126/264 (47.73%), Query Frame = 2
Query: 68 LVVTYILWFCPGSVWAGVAVDAAVALLSDNYRAELGATSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAP-YLGGTLLPGPGAWATGSL-------EGAN----TTGLAALPLHAEVALQVFDLSLRDSEARLWLQQAFPLLFKWHKYLHTQ-RADPRTGLVYVYHPWETTLPLDSPLWEPLLQEARQQAANQSWPEPTLPEGVTSVPGFPGAGTYGAALYLAECLARQTPSASSHD 820
L+V + FC + VA A + +L +N+ + T P + + ASL+ A A D RA+AEF ++ Q + G++P +S +L +L PGP W G EG T+GLAALP+H+ VALQ++ +SE +L + L +WH YLH+ RAD GL +YHPWE LP+ S L L++ + Q P V ++PG+PG TY L L ECL SA D
Sbjct: 55 LLVFCLCSFCSPTRPCDVAGPARM-VLEENWASSEQWTRPFANSSNMADALASLLSCHALAKSDWKRAKAEFNTLLSYQWQSGMLPKLMYSMELSRVLWLNDSLYPGPQWWWNGQTVARRLAEEGQESSSLTSGLAALPMHSTVALQMYAAQGSNSEGLDFLNEVHGRLMEWHSYLHSPPRADASDGLTLLYHPWEAELPMASSLAAQLVEGLSADSGAQ-----LPPASVQTLPGYPGNSTYARDLGLLECLRHVNYSAPCAD 312
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A835Z1J8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J8_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.150e-23 Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 2
Query: 242 AWAHVDQLRARAEFLSIFEGQREDGLVPTARF-------SRGYDAPYLGGTLLPGPGAW-ATGSLEGANTTGLAALPLHAEVALQVFDLSLRDSEARLWLQQAFPLLFKWHKYLHTQRA 574
A AH DQ RA+AE +++ Q + G +P+ARF S + ++ GT LPGP W G NTT LAALPLHA VALQV+ LS R ++ARLWLQQ FP L++WH +LH RA
Sbjct: 9 ALAHSDQARAQAEVVAVLNSQWDSGFIPSARFPAESANSSGSGNNDWVEGTALPGPRFWRGCVGRNGDNTTALAALPLHAHVALQVYALSDRGADARLWLQQIFPALYRWHAHLHAVRA 127
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A2W6BMW9_9ACTN (Glycogen debranching protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A2W6BMW9_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 3.320e-16 Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 2
Query: 203 PFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATG-----SLEGANTTGLAALPLHAEVALQVFDLSLRDS----EARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLL 658
P Q S + V+ WAH+D RA E S+F Q G+VP F D + PGP W G G T+G+ P+HA +V++ + D +AR L FP + +WH+YL TQR ++GLV +YHPWE+ ++P W+ +L
Sbjct: 35 PHQWSWDAAFVAVGWAHIDVSRAFTELESLFAAQWSTGMVPHIVF----DPATALDSYFPGPQRWGCGVSTDAPAPGPATSGICQPPVHAVALARVWEKATTDQGCIEDARRRLGWLFPRMLRWHRYLMTQRDPEQSGLVSIYHPWESGAD-NAPRWDAVL 190
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A7W1J2C8_9ACTN (Beta-fructofuranosidase n=1 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A7W1J2C8_9ACTN) HSP 1 Score: 88.6 bits (218), Expect = 3.730e-16 Identity = 70/209 (33.49%), Postives = 101/209 (48.33%), Query Frame = 2
Query: 203 PFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATGSLEG-------ANTTGLAALPLHAEVALQVFDLSLRD-----SEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQEARQQAANQSWPEPTLPEGVTSVPGFPGAGTYGAALYLAECLAR 793
P Q S S ++ A +D RA E +S+F+ Q G VP F++ AP + PGP W T + E A T+GL P+HA AL++++++L +EAR +L +P LF WH+YL T R +GLV +YHPWE+ +SP W L+ + P P L GVT P Y ++L E + R
Sbjct: 56 PHQWSWDSAFIAIGLAQLDTGRAARELVSLFDHQWATGKVPHIVFNQ--KAPPE--SYFPGPEHWVTAAPESPDAPPTPALTSGLCQPPVHAIAALRIWEVALERGGEALAEARAFLYDIYPKLFAWHRYLATTRDPEGSGLVTIYHPWESGTD-NSPRWNGALERV-EVGELPPHPRPDL-LGVTDPSQRPTEEKYARYIWLVELIKR 257
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A6J4PCC8_9ACTN (GH63 n=1 Tax=uncultured Rubrobacteraceae bacterium TaxID=349277 RepID=A0A6J4PCC8_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 1.120e-15 Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 2
Query: 134 AVALLSDNYRAELGATSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATGSLEG---ANTTGLAALPLHAEVALQVFDLSLRDSE----ARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQ 661
A A+L +N SP+ + P Q S S ++ AH+D +RA E S+ + Q E+G +P F+ +AP + PGP WA+ + A T+GL P+HA AL++ ++ E AR +L + +P L WH+YL T R +GLV +YHPWE+ +SP W L+
Sbjct: 10 AAAVLRENDMGTWTRASPTLY--PHQWSWDSAFIAIGLAHLDTVRAAGEIRSLLDHQWENGKIPHIIFNP--EAPPE--SYFPGPEHWASAAAAPDIPAMTSGLCQPPVHAFAALRILQIAEARGEGAAGAREFLAEVYPKLLAWHRYLATARDPEGSGLVTIYHPWESGTD-NSPRWTGALE 185
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A418MTP4_9ACTN (Uncharacterized protein n=2 Tax=Micromonospora radicis TaxID=1894971 RepID=A0A418MTP4_9ACTN) HSP 1 Score: 86.3 bits (212), Expect = 1.880e-15 Identity = 62/172 (36.05%), Postives = 85/172 (49.42%), Query Frame = 2
Query: 179 TSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGY-DAPYLGGTLLPGPGAWATGSLEGAN---TTGLAALPLHAEVALQVFDLSLRDSEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQEARQQAA 682
T PS + P Q S S ++ WAH R +E S+F+ Q DG VP F+ DA Y PGPG WATGS++ A T+GL P+HA A + + D +AR L + +P L YL + R GLV + HPWE+ L +SP W+ + +AA
Sbjct: 15 TVPSRTLYPHQWSWDSAFIAIGWAHARPERVWSELTSLFDAQWRDGRVPHIVFNPAVSDAAYF-----PGPGFWATGSVDAAPPTATSGLVQPPVHALAAWHAYRRAPSD-QARAALARLYPRLVAQQHYLASHRDVGGAGLVSIVHPWESGLD-NSPAWDDPMAAVPAEAA 179
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A838JQN1_9ACTN (Beta-fructofuranosidase n=1 Tax=Rubrobacteraceae bacterium TaxID=2740537 RepID=A0A838JQN1_9ACTN) HSP 1 Score: 85.9 bits (211), Expect = 2.960e-15 Identity = 59/175 (33.71%), Postives = 90/175 (51.43%), Query Frame = 2
Query: 173 GATSPSSFVDPFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATGSLEG-------ANTTGLAALPLHAEVALQVFDLSLRD-----SEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQ 661
G T S + P Q S S ++ AH+D RA E +++F+ Q G VP F+ +AP + PGP WAT + + A+T+GL P+HA +++ + +EAR +L++ +P LF WH+YL T R +GLV +YHPWE+ +SP W L+
Sbjct: 32 GWTKASPGLYPHQWSWDSAFIAVGLAHLDTRRAAQELVTLFDHQWATGKVPHIVFNM--EAPP--DSYYPGPEHWATAAPDSPDAPPTPAHTSGLCQPPVHAIAVRHIWEAAGNGGEDVLAEARGFLEELYPKLFAWHQYLATTRDPEESGLVTIYHPWESGTD-NSPRWNAALE 201
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Match: A0A7W1P7C0_9BACT (Glycogen debranching protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7W1P7C0_9BACT) HSP 1 Score: 82.8 bits (203), Expect = 3.300e-14 Identity = 53/165 (32.12%), Postives = 85/165 (51.52%), Query Frame = 2
Query: 203 PFQASTASLVVSWAWAHVDQLRARAEFLSIFEGQREDGLVPTARFSRGYDAPYLGGTLLPGPGAWATGSLEG-------ANTTGLAALPLHAEVALQVFDLSLRD-----SEARLWLQQAFPLLFKWHKYLHTQRADPRTGLVYVYHPWETTLPLDSPLWEPLLQ 661
P Q S S ++ WAH+D RA E ++F+ Q G +P F+ +AP + PG WA + + A T+GL P+HA ++++++ ++AR +L++ +P LF WH+YL T R +GLV +YHPWE+ +SP W L+
Sbjct: 39 PHQWSWDSAFIAVGWAHLDTRRAARELETLFDHQWATGKIPHIVFNM--EAPPE--SYFPGAEHWAAAAPDSPDAPPTPARTSGLCQPPVHAMAVRRIWEVAGNRGGEALAQARGFLEELYPKLFAWHRYLATIRDPEESGLVTIYHPWESGTD-NSPRWNGALE 198 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig73.18620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig73.18620.1 >prot_S-ischiensis_contig73.18620.1 ID=prot_S-ischiensis_contig73.18620.1|Name=mRNA_S-ischiensis_contig73.18620.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=274bp MLSVSGRWDLVVTYILWFCPGSVWAGVAVDAAVALLSDNYRAELGATSPSback to top mRNA from alignment at S-ischiensis_contig73:115293..118521- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig73.18620.1 ID=mRNA_S-ischiensis_contig73.18620.1|Name=mRNA_S-ischiensis_contig73.18620.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3229bp|location=Sequence derived from alignment at S-ischiensis_contig73:115293..118521- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig73:115293..118521- >mRNA_S-ischiensis_contig73.18620.1 ID=mRNA_S-ischiensis_contig73.18620.1|Name=mRNA_S-ischiensis_contig73.18620.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1644bp|location=Sequence derived from alignment at S-ischiensis_contig73:115293..118521- (Schizocladia ischiensis KU_0333)back to top |