mRNA_S-ischiensis_contig111.2424.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A835YL82_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL82_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.270e-19 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 1
Query: 28 AAYPGSLLLRLGLGRPEDAASVPWPLPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRVLFN 222
A +PGSLLLRLG+G E A + PWP+P KLQP LF+Y+Y RDL+P D+NGLLDPYL++ FN
Sbjct: 805 AGFPGSLLLRLGMGFEELAQAYPWPVPVHPKLQPYTLFMYIYQARDLNPEDANGLLDPYLKIRFN 869
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: K3X523_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X523_GLOUD) HSP 1 Score: 67.0 bits (162), Expect = 3.010e-11 Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 10 VKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
+ A+ +PG++L+RLG G EDA PW + A K P +L +++Y GR L PADSNGLLDPYL V
Sbjct: 207 IDALADDEFPGNVLVRLGFGTEEDAHRTPWDRADMDAVNKRVPYQLRVHVYQGRRLPPADSNGLLDPYLVV 277
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A484EEQ4_BRELC (Uncharacterized protein n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEQ4_BRELC) HSP 1 Score: 65.1 bits (157), Expect = 1.440e-10 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPW---PLPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+RLG G E A W L A K P +L +++Y GR L PADSNGLLDP+L V
Sbjct: 493 QAIDALEDETFPGNVLIRLGFGTEEMAMKTTWNRSDLEAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLVV 565
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A3F2S008_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S008_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.700e-10 Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+RLG G E A W L A K P +L +++Y GR L PADSNGLLDP+L V
Sbjct: 838 QAIDALEDDTFPGNVLVRLGFGTEEMAMQTAWDRSDLDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLIV 910
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A0W8D719_PHYNI (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D719_PHYNI) HSP 1 Score: 63.9 bits (154), Expect = 3.680e-10 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+R+G G E A W L A K P +L +++Y GR L PADSNGLLDP+L V
Sbjct: 772 QAIDALEDETFPGNVLVRMGFGTEEMAMQTAWDRSDLDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLVV 844
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: H3GR54_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3GR54_PHYRM) HSP 1 Score: 63.9 bits (154), Expect = 3.690e-10 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+R+G G E A W L A K P +L +++Y GR L PADSNGLLDP+L V
Sbjct: 839 QAIDALEDETFPGNVLVRMGFGTEEMAMQTAWDRSELDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLIV 911
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: G4ZFS2_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZFS2_PHYSP) HSP 1 Score: 63.5 bits (153), Expect = 5.040e-10 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+R+G G E A W L A K P +L +++Y GR L PADSNGLLDP+L +
Sbjct: 828 QAIDALEDETFPGNVLVRMGFGTEEMAMQTAWDRSDLDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLVI 900
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A662WHM1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WHM1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.040e-10 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWPLP---APGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A+++ +PG+ L+R+G G E A W A K P +L +++Y GR L PADSNGLLDPYL V
Sbjct: 845 QAIDALESETFPGNALVRMGFGTEEMATETAWDRSDRDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPYLVV 917
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: A0A0P1A6S5_PLAHL (Inositol polyphosphate 5-phosphatase and related proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6S5_PLAHL) HSP 1 Score: 63.5 bits (153), Expect = 5.060e-10 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+R+G G E A W L A K P +L +++Y GR L PADSNGLLDP+L V
Sbjct: 852 QAINALEDETFPGNVLVRIGFGTEEMAMHTMWDRTDLDAVNKRIPYQLRVHIYQGRRLPPADSNGLLDPFLVV 924
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Match: M4BQ73_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQ73_HYAAE) HSP 1 Score: 63.2 bits (152), Expect = 6.890e-10 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 4 QVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWP---LPAPGKLQPVRLFIYLYMGRDLSPADSNGLLDPYLRV 213
Q + A++ +PG++L+R+G G E A W L A K P +L ++Y GR L PADSNGLLDPYL +
Sbjct: 842 QAIDALEDETFPGNVLVRMGFGTEEMAMHTSWDRTDLDAVNKRIPYQLRAHIYQGRRLPPADSNGLLDPYLVI 914 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig111.2424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig111.2424.1 >prot_S-ischiensis_contig111.2424.1 ID=prot_S-ischiensis_contig111.2424.1|Name=mRNA_S-ischiensis_contig111.2424.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=74bp MQVVKAMDTAAYPGSLLLRLGLGRPEDAASVPWPLPAPGKLQPVRLFIYLback to top mRNA from alignment at S-ischiensis_contig111:40940..41626+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig111.2424.1 ID=mRNA_S-ischiensis_contig111.2424.1|Name=mRNA_S-ischiensis_contig111.2424.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=687bp|location=Sequence derived from alignment at S-ischiensis_contig111:40940..41626+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig111:40940..41626+ >mRNA_S-ischiensis_contig111.2424.1 ID=mRNA_S-ischiensis_contig111.2424.1|Name=mRNA_S-ischiensis_contig111.2424.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=444bp|location=Sequence derived from alignment at S-ischiensis_contig111:40940..41626+ (Schizocladia ischiensis KU_0333)back to top |