mRNA_S-ischiensis_contig110.2402.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A7U3NQV8_9STRA (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3NQV8_9STRA) HSP 1 Score: 2503 bits (6486), Expect = 0.000e+0 Identity = 1268/1268 (100.00%), Postives = 1268/1268 (100.00%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI 3804
MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI
Sbjct: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTLNNNHNSNIKNDDQTKHHKLRSAIKFRYRI 1268
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0FAT1_9PHAE (DNA-directed RNA polymerase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAT1_9PHAE) HSP 1 Score: 1176 bits (3042), Expect = 0.000e+0 Identity = 611/1287 (47.47%), Postives = 873/1287 (67.83%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIE-DNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN--FLENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKR-KIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M++QS +F NNV+NKKELK II WAF N+G KAA+ VD LK+IGF+YATK+GISIS+EDL+IPP+KT L+++A + E GEI+EVER QK+I IWN TSE LKER+I + ++ DPLNSVYIMAFSGARGNISQVRQL+GMRGLMSDPNGQIID I +NFREGLSITDYIISSYGARKG+VDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E +E DN SL++ + GRVLA +I P T IIA +NE IT L EK++ +++RSPLTC+CRRS+CQ CYG NLA+GNLV+LGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+ RQ R++CSGYI F TL R RT+YG+D L+ EN+S+++++ Y N++ +++ +++I+V NN ++K N++LFE PK K ++ + + AK+SG+II+E F + + + + + + W+LSG V I F+ KL++ L + K+Q++ QSK+ G+ F +N T +I K+ + KI LE +I +CK+YL+ + + + P L+ + +G L KYKTKTGG F+ +N + + + GS++FY+PE++ + K GD+VNKKTEI+ NYF I G I F+ K +EI IKPG ++ + ++D QI+YPGEII N++I SY+E+ + ++L LRP+ RYE N FN F PN+F + + L+++S +IK + PI FI + F EN + + FE + +++G L+ ++ + ++PKE+ K+++ L+LFI++KQF + +++ SFD I+PF + IK + + +LLTT+ DYK IF++ K NQLIK+ + N K+S L++++ GNK+ + + PYLFSKGA +R GD IK +++ GQL+YE + TGDIVQGLP++E+ILEAR PK EA ++ G I K I++ + LI+I K S ++ + S LL++K++ +++ Q LTEG LNPHT+L VYF+Y+ S+ LS+Y+++Y+S K++Q LLNSVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q YIN C+ K K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLTQA+I+G+ DW+ GLKEN I G+LIP GTGFY N D ++ KV +P L +NS++K + K KL+ IKF+Y
Sbjct: 1 MLKQSKIFSNNVINKKELKKIIEWAFNNYGQRKAAFFVDRLKEIGFEYATKSGISISIEDLRIPPAKTVLMQNATEDVFTTESRANNGEITEVERFQKLIYIWNTTSEELKERLIDFLKKTDPLNSVYIMAFSGARGNISQVRQLIGMRGLMSDPNGQIIDRAIGANFREGLSITDYIISSYGARKGIVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLQESLEIDNKRFLSLKQLVNGRVLASSIFKPGTNEIIASRNEQITNELVEKLISLKITKVLIRSPLTCQCRRSVCQHCYGWNLASGNLVDLGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQSRSECSGYISFLPTLKIRPYRTDYGQDALISENRSWLRIVNYANEVLNVRVEDQTLILVKNNQYIKNNEVLFEAAPKLKEIKLAQKEIKYIYAKESGKIILENNGFPQEIVNDDFDRRSKKNYIFWVLSGQVLSIAFSAKLRVRKLKKVYKDQSIAQSKMVTTIGGFAHFCRNELTQEINGVKIQNFSKSLDSFKIFLEKSSFEIIKCKLYLSHYHEVLIKPEMLENRLFLIGFLNNKKYKTKTGGKFFISNFYKPTLLGTKLRNKINHKIKSGSTIFYLPEASIQTRTNKKDFKFKKGDFVNKKTEIFPNYFTSIDGFIDFEVGK-QIKEITIKPGQRYQVEGNISNWEQFDEQIYYPGEIILGNYKIEVLSYVEIENNNEAIYLHLRPITRYEFTNERPFNFFAPNFFTQVNLIIQDFNLHILSGQQIKLDAPIQFIDSPLTADYSFEENNTEMLFEFKGPEKKNSWGKVNLVYSQSLNFDVVIPKELTKQDICLNLFIEEKQFTDPYSIIGSFDSIMPFDNFIYNIKIKQNEVKSNVLLTTKADYKEIFLDSFTHTYKKNQLIKVHRLFNNNILIKDSGLLKEVLGNKLLYHLGQPYLFSKGALIRKVPGDYIKKQEIFGQLIYELMKTGDIVQGLPKIEDILEARKPKAEALLSTRQGFI-KAIKY-TSELIFIITKPS-------LKSDYYTASRSDRLLVKKYESISIGQPLTEGALNPHTLLHVYFRYFYSLGTLSIYESAYHSIKRLQTLLLNSVQAIYISQGVIISSKHVELIVREMTHKVYIEYPGKTNFLPGDIVDLDQANYINLCIKKNNNKVGFRPILLGITKSSLKTDGFLAAASFQETTRVLTQAAIQGKTDWLRGLKENAITGRLIPAGTGFYLNQDITFNKVLLPKTGLEEKNNSSLKKQLRLKQAKLKRVIKFKY 1277
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0F804_9PHAE (DNA-directed RNA polymerase n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F804_9PHAE) HSP 1 Score: 1166 bits (3017), Expect = 0.000e+0 Identity = 616/1286 (47.90%), Postives = 850/1286 (66.10%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILF-SLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M+ +S +F NN +NKKELK II WAFKN+G KAAY VD+LK+IGF+YATK+GISIS+EDL+IPP+K L++ A + AE + GEI+EVER Q++I IWN TSE LKER+I +F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDPNG+IID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI I+E +E ++ F SL E + GRVLA +I P TK IA +N+ ITP L EK++K+ N +++RSPLTCECRR++CQ CYG NLA G LVELGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+ RQ RA CSGY+ F L RTNYG+D +V ENQS++ +I Y N+I ++++ ++II+V N++++K+N +LFE PK K + + + AK+ GEI++EK F + + + + + W+LSG V I F T LKI L I +NQ + QSK+ G++ F +N T +I + +S KI LE + ++T+CK+YL+ I L P + + +LG L+ KYKTKTGG FY +N + + + GS++FYIPE+T + K G YVNK EI+ NYF +I G + ET+ + I IKPG ++ E + Q++YPGE I + FEI SYIE I ++L +RP+ RYE N NF PN F P + ++ L ++S IK + PI F+ I++ N + + FE + ++YG KL + + ++PKE+ K ++ L+L +++KQFV+ T+L SFD + PF V IK + + + +LLTT+ DY+ IF++ K NQ +K+ K N K S L+ +++GNKI + PY FSKGA +R GD IK ++ GQLVYERL TGDIVQGLP+++ ILEAR PK EA ++ G I K I++ + ++ R D I S LL++K++ ++V Q LTEG LNPHT+L VYF+Y+CS+ LS+Y+++Y S KK+Q LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q +YIN C+ K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT+A+I+G+ DW+ GLKEN I G+LIP GTGFY+N D ++ K +P + N ++K + K KL+ IKF+Y
Sbjct: 1 MLNRSKIFSNNTINKKELKKIIEWAFKNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLRIPPAKIPLMKIASQDVFLAESQANNGEITEVERFQRIIYIWNSTSEELKERLIDFFKKNDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPNGKIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFIEEDLEKDEKGFLSLNELLNGRVLASSIFKPGTKDSIALRNQQITPSLLEKLLKFKINKVLIRSPLTCECRRAVCQHCYGWNLALGTLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQGRAHCSGYLNFLPELKVSPYRTNYGQDAVVSENQSWLAIINYANEIVKVRVEARTIILVANHNYIKRNQVLFEAAPKIKEINLAEKEIKYICAKEPGEIVLEKNGFPEDSSNEIFTQRSKKNYIFWVLSGQVFSIGFNTALKIRKLEKIYRNQAIAQSKMVTTIGGFVHFSRNKLTQEINSLNIQNSSEGLGNFKIFLERNNIEVTKCKVYLSHTHEILLKPELFNNRLFSLGFLRNKKYKTKTGGQFYISNFYKPTLIGNKLGNKSTGKFKSGSTIFYIPEATIQTTSNKKDFKFKKGSYVNKNKEIFPNYFTNIEGFADY-ETEKRTKCITIKPGQRYLLDKNIKLHKEINEQVYYPGEFILNQFEIEVLSYIEFEDINEQVYLYIRPITRYEFTNERPIKNFQPNCFAPLDVMVENFNLQIVSGQHIKIDYPIQFVDSPLVIDYSLQSNDTELIFEFKGPEKKNSYGQVKLSYSQTFLFDTVIPKELKKTDISLNLIVEEKQFVDPYTILGSFDTLFPFDNFVHSIKIKRNSIKSNVLLTTKSDYQEIFLDSFTHNYKQNQFLKVNKLFNNNALIKNSGLMHEVAGNKIVLHLGQPYFFSKGALIRKIPGDYIKKQENFGQLVYERLKTGDIVQGLPKIDNILEARKPKAEALLSTRQGFI-KSIKYSSDLILISTTPSLRQDYYI--------ASRSERLLVKKYECISVGQPLTEGPLNPHTLLHVYFRYFCSLGTLSVYESAYRSLKKLQTLLLTSVQAIYISQGVIISGKHVELIVREMTHKVFIEYPGKTNFLPGDIIDLDQAQYINLCIKNNNKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTRAAIQGKTDWLRGLKENAITGRLIPAGTGFYANQDITFNKALLPEKLVTKKDNLSLKKQLKLKQTKLKKLIKFKY 1276
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: D1GJH4_FUCVE (DNA-directed RNA polymerase subunit beta'' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH4_FUCVE) HSP 1 Score: 1151 bits (2978), Expect = 0.000e+0 Identity = 614/1286 (47.74%), Postives = 852/1286 (66.25%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIE-DNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNS---------------QRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSN--IFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M S +F NN++NKKELK II WAF N+G KAAY VD+LK +GF+YATK+GISIS+EDL+IPP KT L+++A + E + GEI+EVER QK+I IWN TSE LKER+I +F++ DPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E IE D S++E I GRVLA +I P TK ++A++N+ +T L ++I+ I++RSPLTCECRR++CQ CYG NLA+GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT + +RQ RA+CSGYI+F TL RTNYG+DV++ ENQS++ +I Y N+I IK+ +++I+V N++++K+N +LFE PK K + + V AK+SGEII+EK F + + + + + W+LSG V IPF T +KI L I KNQ L QSKI G+I F +N T +II K+ +S KI LE+K+ ++ CK+YL+ I L P L + +LG LK KYKTKTGG FY +NS R ++GS++FYIPE+T N + + K YV + EI+ NYF +I G I F E + + I IKPG ++ L+ + Q+++PGE+I + FEI + SY+E+ + N L+L +RPV RYE N + N F+ +++++ ++S ++K + PI F+ I+ + +N I FE+ Q + ++Y L+ N + + I+P E+ + L+L +++KQF++ +AS D IIPF+ V IK + + ILLTT+ DY+ +F++ NNQLI + N K S L++ I GNKI + PY FSKGA +R GD IK ++ GQL+Y+RL TGDIVQGLP++ +ILEAR PK EA ++ G I K I++ +I + ++ + LL++K++ ++V Q +TEG LNPHT+L VYF+Y+ S+ LS+Y+A+Y S KK+Q LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L Q +YIN + K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT A+++G+ DW+ GLKEN I G+LIP GTGFY + D ++ KV +P + +N ++K K +KLR+ I+F+Y
Sbjct: 6 MSSNSKIFSNNIINKKELKKIIEWAFNNYGQRKAAYFVDQLKGLGFEYATKSGISISIEDLRIPPVKTTLMKNATRDVFITESKANNGEITEVERFQKIIYIWNNTSEELKERLIDFFKKTDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDRAITANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTKRGILLQEDIESDKKKFLSVKELINGRVLATSICKPGTKELVAFRNQQVTSSLTKQIINLKIAKILIRSPLTCECRRAVCQHCYGWNLASGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGELTRQGRAECSGYIQFLPTLKVIPYRTNYGQDVVMSENQSWLTIINYANKIINIKVESRTLILVNNHNYIKQNQVLFEAAPKIKDINLSQKEIKYVCAKRSGEIILEKNGFPGAFSNEDFTRRSKKNYIFWVLSGKVFSIPFNTSIKIRKLEKIYKNQALAQSKIVTTMGGFIHFCRNTLTQEIISLKVQNSFQSQNNFKIFLETKNLEVINCKVYLSHNHEITLKPELLKNQLFSLGLLKNNKYKTKTGGYFYISNSYKSNLLDDKKVNNLINRLKFGSTIFYIPEATIQTNTNKSDFKFKKDSYVTRHQEIFPNYFTNIKGFIDF-ELEKQIKYITIKPGEKYLLKENINSFLDINEQVYFPGELILNKFEIKSLSYLEIINSNNQLYLFIRPVTRYEFTNEISKKILERNPFNDIKLKINNFNFYILSGQQVKIDEPIQFLDSTITIDSFLHLNNREIMFELKQIKEKNSYIQVNLLYSQNFLFDTIIPNEIKNSNINLTLIVEEKQFIDPYATIASLDTIIPFSNFVYNIKTKRNAVKANILLTTKSDYQEVFLDSFTHNYINNQLIHINNLFPNNVCIKNSGLLKSIKGNKILLHLGDPYFFSKGALIRKIPGDYIKKQENFGQLIYQRLKTGDIVQGLPKIADILEARKPKTEALLSTRQGFI-KSIKYTEELIIIVTKPTISYECF--------TTSRPERLLVKKYESISVGQPITEGPLNPHTLLYVYFRYFHSLGTLSIYEAAYRSIKKLQILLLMSVQAIYTSQGVIISAKHIELIVREMTHKVYIEYPGKTNFLPGDIIDLNQAQYINLSIQNGHKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTHAALQGKTDWLRGLKENAITGRLIPAGTGFYLDQDIAFNKVLLPEKLITGQNNLSLKKQLNLKKNKLRTRIRFKY 1281
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A0R6M448_UNDPI (DNA-directed RNA polymerase n=32 Tax=Laminariales TaxID=2886 RepID=A0A0R6M448_UNDPI) HSP 1 Score: 1148 bits (2970), Expect = 0.000e+0 Identity = 612/1293 (47.33%), Postives = 851/1293 (65.82%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILF-SLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLID-----ILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTG--FYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M++QS +F NN++NKKELK II WAFKN+G KA Y VD+LK+IGF+YATK+GISIS+EDLKI P+K+ L+ A + AE + GEI+EVER Q++I IWN TSE LK+R+I++F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDPNG+IID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E +E ++ F SL+E + GR+LA I P +K I+A +N+ ITP + E+++K+ N +++RSPLTCECRR++CQ+CYG NLA G LVELGE VG+IAAQSIGEPGTQLTMRTFHTGG+FTS+ RQ RAQCSGYI F L RTNYG+D +V ENQS++ +I Y N+I ++++ ++II+V NN+++K+N +LFE PK K + + + AK+ GEI +E F N K + + + W+LSG V I F T L++ I KNQ + QSK+ G+ +N T +I + + KI +E + ++T+CK+YL+ I L P L+ + +LG L+ KY+TKTGG FY +N + + + GS++FYIPE+ + + GDYV K EI+ NY +I G I F E + + I IKPG L+D E++ Q++YPGE++ D FE+ SYIE I N ++L +RP+ RYE N F N F P + ++ L + S +IK + PI F+ I++ N + + FE + ++YG LI + + ++PKE+ K ++ L+LF+++KQF++ T++ SFD I PF V +K + N + ILLTT+ DY+ IF++ + K NQ +K+ K N K S L+EQ+SGNKIT + PY FS GA +R GD IK ++ GQLVYERL TGDIVQGLP+++ ILEAR PK EA +A G I K I++ N ++ +D I S LL++ ++ + V Q LTEG LNPHT+L VYF+Y+CS+ LS+Y+++Y S KK+Q LL SVQA+Y SQGV I+ KH+E+I+++MT+++ I YPG TNFL GD+++L+Q +YIN C+ K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT+A+I+G+ DW+ GLKEN I G+LIP GTG FY+N D ++ KV +P + N ++K + K KL+ IKF+Y
Sbjct: 1 MLKQSKIFSNNIINKKELKKIIEWAFKNYGQRKAVYFVDQLKEIGFEYATKSGISISIEDLKISPAKSALMEIASNDVFLAESQANNGEITEVERFQRIIYIWNSTSEELKDRLIEFFKKNDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPNGKIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLEEDVEKDEKGFLSLKELLNGRILALTIFKPGSKEILALRNQEITPSVIEELVKFKINKVLIRSPLTCECRRAVCQQCYGWNLALGTLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGIFTSELIRQGRAQCSGYINFLPELKISPYRTNYGQDAVVSENQSWLAIINYANEIVKVRVEARTIILVNNNNYIKRNQVLFEAAPKIKEINLAEKEIKYICAKEPGEIFLENDGFPQTLINDNFSKRSKKNYIFWVLSGQVFSIAFNTNLRVRKSEKIYKNQAIAQSKMVTTIGGFTHLSRNRLTQEINSLSIQNCSYGLNDFKIFIERNNIELTKCKVYLSHTHEIVLKPELLNNRLFSLGSLRNKKYRTKTGGKFYISNFYKPSLFGHPSGNNFTNKLKSGSTIFYIPEALVQTTSNKKDFRFKKGDYVKKDIEIFPNYITNIEGFIDF-EVEKRIKYISIKPGQ-----RHLLDKRPKLSKEFNEQVYYPGELVLDKFEVKVLSYIEFEEINNEIYLYIRPITRYEFTNERAVKIFESNCFAPLNLLVENFNLQVRSGQQIKIDYPIQFVDSPLTIDYSLQSNDTELIFEYKGPEKKNSYGQVNLIYSQTFLFDSVIPKEIKKTDISLNLFVEEKQFIDPYTVVGSFDTIFPFDNFVYNVKIKRNNIKSNILLTTKSDYEEIFLDSFTHKYKQNQFLKVNKLFNNNVLIKNSGLMEQVSGNKITLHLGQPYFFSTGALIRKIPGDYIKGQENFGQLVYERLKTGDIVQGLPKIDNILEARKPKNEALLATRQGFI-KSIKYTSNLILISTLPSKSYDYYI--------ASRSERLLVKNYESICVGQPLTEGPLNPHTLLHVYFRYFCSLGTLSIYESAYRSLKKLQTLLLTSVQAIYISQGVIISGKHVELIVREMTHKVYIEYPGKTNFLPGDIIDLDQAQYINLCIKNNNKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTRAAIQGKTDWLRGLKENAITGRLIPAGTGTGFYANQDITFNKVLLPDSLITKKDNLSLKKQLKLKQTKLKKLIKFKY 1278
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8E6D2G6_9PHAE (DNA-directed RNA polymerase subunit beta'' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D2G6_9PHAE) HSP 1 Score: 1130 bits (2922), Expect = 0.000e+0 Identity = 582/1253 (46.45%), Postives = 841/1253 (67.12%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFY--------STNS---QRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSI-KNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFL--ENYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPTL 3717
M ++S +FCN ++NK+ELK +I+WAFKN+G KA +LVD+LK +GF+YATK+GISISLEDLK+PP KT L+ A + ++ E+E GEI+EVER QK+I IWN TSE LK+RV+ +F+ DPLNSVYIMAFSGARG+++QVRQLVGMRGLM+DPNGQIID+PI +NFREGLS+TDYIISSYGARKG+VDTAIKTADSGYLTRRLV++AQ ++I E DC ++ G+ +++ + N++ SL++R +GRVLA + P+ I+ +N+ ITP LAE+ + SI++RSPLTCECRRS+CQ+CYG NLA+ LV+LGE +GI+AAQSIGEPGTQLTMRTFHTGGVFTS+ +RQVRA +GYI F T+ R +RTNYG+D L+ + S I+LITY+N+IK+IK+ P++II+V N +VKKND+L E + + M + V+AK GEI+ E++ + + + + V+ L WILSG V IP K+ + KNQ+L QS+I G++ F+ +T K++ K+ +S + ++ +I +E I CK+Y ++ I +N + LG L K+KT+T G FY S+N+ +RT G +VFY+P+ST + K +V++ E++ N+F + G + F ETK +E+ IKPG NS++D+ D Q++YPGEI+F EI SY+E+ SI K +++ +RP+ RYE+ + N+F ++++ +N S + +K FI ++ N S I FE + + ++ L + + ++PKE+ K+++ ++L +Q++QFVE + L + D++ + IK++ K++ I++ T+ D+K I+++D D + +Q IK +K G N S LI+++ GNK+ + + PYLFS+GA + GD IK + LGQLVYERL TGDIVQGLP+VEEILEAR+PK +A ++ PG+I I+ + I I + S ++ + + LL++KFDFVNV Q LTEG LNPH +LD+YFQY+CS+ LS+YQ++Y+S KKVQ FL++SVQ++Y+SQGV I+DKH+E+II++MT++I I PG+TNFL GD+L+LEQ +IN L + KI F+PIL GITKS+LKA+ FL+AASFQ TTRVLT A+++G+ DW+ GLKENVI G+LI GTGFY NND +Y K +P +
Sbjct: 1 MRKKSRIFCNKIVNKQELKKLISWAFKNYGQRKAVFLVDQLKALGFEYATKSGISISLEDLKVPPVKTFLMTKATQDVIQTEFEVNNGEITEVERFQKIIRIWNNTSEDLKDRVVDFFKTTDPLNSVYIMAFSGARGSLAQVRQLVGMRGLMADPNGQIIDLPITTNFREGLSVTDYIISSYGARKGIVDTAIKTADSGYLTRRLVEVAQGIIISERDCYTRSGLLLRKRVTKNEVPLSLKQRAIGRVLANAVFSPKNGQILGKRNQCITPHLAEEFTNFQIPSILIRSPLTCECRRSVCQQCYGWNLASAKLVDLGESIGIVAAQSIGEPGTQLTMRTFHTGGVFTSEKTRQVRANHAGYINFLPTMKARFIRTNYGQDALINDRDSHIQLITYSNEIKKIKVSPETIILVKNKIYVKKNDVLLEFTSRTRNMYPAEKEVKYVLAKHGGEIVSEEKGYRQPFDSEQFKVNKGVNRLFWILSGQVYDIPIKAKINARTFQKVYKNQSLAQSRIVTMIGGFVSFLMIPSTEKVLGIKINNSFRITKQARIFIERSYLGIRSCKMYFSRKSDISINFGLSHEQHFLLGYLNSRKFKTRTAGTFYTDQFYNSSSSNNHSERRTRSGGTVFYLPKSTVETTTAIRNFKFKKRSFVSRDKEVFPNFFTSVEGFVNF-ETKNKIKEVSIKPGLRYFLKNSIVDVDTIDQQLYYPGEILFKTIEIKKLSYLEIESITKRGIYIYVRPITRYEVTRDNSRKFLQRNYFGDIKLKVGNFVMNATSGINLKGNGAFQFIYSPVVFDYPLHSNNSEIRFEFRNSRKRKSWSEVFLNCSQTFLIDPLIPKELKKDDISVNLLVQNEQFVEPYSTLIAIDIVARKDNFIYEIKQKYTGKKRTIIMITKADHKSIYLDDFDHPYRKDQFIKRDQKFGGNLTISSSGLIKKVDGNKLLYHLGQPYLFSQGAFVNKLPGDFIKTHENLGQLVYERLKTGDIVQGLPKVEEILEARNPKNQAVLSKRPGLIYD-IDRDIPQSILISARPS------SLYFGNYFVSKANRLLVKKFDFVNVGQPLTEGPLNPHNLLDIYFQYFCSLNTLSLYQSAYFSIKKVQSFLISSVQSIYFSQGVIISDKHIELIIREMTSKIWIEDPGETNFLPGDILDLEQANFINLSLRSENKILFRPILFGITKSSLKADSFLAAASFQETTRVLTNAAVQGKTDWLRGLKENVITGRLITAGTGFYLNNDLTYKKALLPPV 1245
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A8F0F9S6_9PHAE (DNA-directed RNA polymerase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9S6_9PHAE) HSP 1 Score: 1114 bits (2881), Expect = 0.000e+0 Identity = 594/1293 (45.94%), Postives = 838/1293 (64.81%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIK--EIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTNSQRTEY---------------GSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREII-IKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINF-LE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHK---GSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMP----TLNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M+++S +F NN++NKKELK II WAF+N+G KAAY VD+LK+IGF+YATK+GISIS+EDLKIPP+K +L+ A AE + GEI+EVER Q++I+IW+ TSE LKER++ +F+++DPLNSVYIMAFSGARGNI QVRQLVGMRGLM+DPNG+IID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++ E ++ND+L ++E + GRVLA +I P T +I +NE +T L ++++K+ I++RSPLTC+CRR++CQ CYG NLA G LV+LGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT RQ RA SGYI F L RT+YG+D +V ENQS++ ++ Y+N++ ++++ ++II+V N +++N +LFE PK M + + AK+SGEI++EK +F + N K + W+LSG V I F TKLK L I KNQ + QSKI G++ F +N T++I + + KI +E +T++TQCK+YL++ I + P D + +LG L KYKTKTGGNFY ++ + + GS++FY+PE+T + K Y+ K +I+ NYF I G I F+ K N I IKPG N L E D Q++YPGEI+ D FE+ SY+E+ + N ++L RP+ RYE N N N F P I +D L + S +IK + PI F+ +++ LE N + + FE + ++YG LI + + ++PKE+ K+ + L++ +++ QF + T++ SFD I F + IK + +++ +LLT + DY+ IF++ K NQ + + K N + S I+++SGNKI ++ PY FS+GA +R GD IK +++ GQL+Y RL TGDIVQGLP+++ ILEAR PK E+ +A G + + + IWI K G R L S ++++ ++ ++V Q LTEG LNPHT+L VYF+YYCS+ LS Y+++Y S KK+Q LL SVQA+Y +QGV I+ KH+E+II++MT ++ I Y G TNFL GD+++L+Q YIN C+ K+ F+PILLGITKS+LK +GFL+AASFQ T RVLT+A+I+G+ DW+ GLKENVI G+LIP GTGFYSN D ++ K +P T+ + N ++K + K KL+ IKF++
Sbjct: 1 MLKRSKIFSNNIINKKELKKIIEWAFRNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLKIPPAKISLMESASHAISLAESQASNGEITEVERFQRIIHIWSTTSEELKERLVDFFKKRDPLNSVYIMAFSGARGNIEQVRQLVGMRGLMADPNGKIIDKAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIINELDCKTRRGIFLEDEEKTDENDVL-PMRELLNGRVLASSICKPDTNEVIGVRNEQLTSTLIDELIKFKIPKILIRSPLTCQCRRAVCQHCYGWNLALGTLVDLGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGQLIRQGRATSSGYINFLPELKLSPYRTDYGQDAVVSENQSWLGILNYSNRMVKVRVEARTIILVANKKHIRRNQVLFEAAPKINEMNLAEKEIKYICAKESGEIVLEKNSFPYDSSNENFTKRTKKNYSFWVLSGQVFSIAFNTKLKARKLEKIYKNQAIAQSKIVTTIGGFVHFSRNKLTNEINGLSIQNRYHGQNNFKIFIEKNNTEVTQCKVYLSQTLEILIKPELFDNQLFSLGFLSNKKYKTKTGGNFYISDFYKPKLLGDKSTKNLIGKQKSGSTIFYLPEATIKTTSNKKDFKFKRKTYIKKNKKIFPNYFSTIDGFIDFEVDKENKYITINIKPGQRYLLENQLDLYKELDEQVYYPGEIVLDQFEVKRLSYLEIENGTNEIYLYFRPITRYEFTNTSPVNILKSNCFAPLNIVIDNFNLKISSGQEIKIDYPIQFVDSPLVVDYSLESNDTELIFEFKGPYKQNSYGELNLICSQTFLFDTLIPKEIKKDSIALNVLVEENQFTDPYTIVGSFDSIFRFDNFIYTIKTKRNSRKSNVLLTVKSDYEEIFLDSFTHNYKQNQFLGVNKLFNNNSLIRNSGWIKELSGNKIVLHLAQPYFFSRGALIRKIPGDYIKKQEIFGQLIYVRLKTGDIVQGLPKIDNILEARKPKTESMLATQQGFVRSI--RYTSDSIWIITKPALGLRRYLLTR----------SQRIVVKNYESISVGQPLTEGPLNPHTLLHVYFRYYCSLGTLSTYESAYRSLKKLQGLLLMSVQAIYMAQGVIISGKHVELIIREMTQKVSIEYQGTTNFLPGDIIDLDQANYINKCIKNDDKLEFRPILLGITKSSLKTDGFLAAASFQETARVLTRAAIQGKTDWLRGLKENVITGRLIPAGTGFYSNQDLTFNKALLPEKQLTMKKD-NLSLKKQLKLKEKKLKKIIKFKF 1279
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A110AQ85_9PHAE (DNA-directed RNA polymerase n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A110AQ85_9PHAE) HSP 1 Score: 1111 bits (2874), Expect = 0.000e+0 Identity = 596/1291 (46.17%), Postives = 842/1291 (65.22%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDILFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN---------------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN-FLE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPN------SIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M+ +S +F NN++NKKELK II WAF N+G KAAY VD+LK++GF+YATK+GISIS+EDL+IP SK L++ A E G I+EVER QK+I+IWN TSE LKE +I + + DPLNSVY+MAFSGARGNISQVRQL+GMRGLMSDPNGQIID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I +LDC+++RGI +++ D+ S +E + GR+LA +I P+TK II ++N+L+T L E+I+K+N I++RSPLTCECRRSICQ CYG NLA+GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT +RQ RA+CSGY+ F TL RT+YG+DV++ ENQS +K+I Y N+ ++K+ +++I+V N++++K+N +LFE PK K + + + K+ GEII+E+ F ++ + K + + + W+LSG V + F LK L NI KNQ L QSKI G+I + T +++ K+ +S KI LE+ + +I CKIYL+ I L P + ++G L+ KYKTKTGG FY +N + + ++GS++FYIPE+T N + + G Y+ + EI+ NYF IAG ++ + K + + IKPG +++ Q+++PGE+I + F I SY+E+ + NN++L +RP+IRYE N F+ ++++ L + S +I+ + PI + I+ FL+ N + + FE + + ++Y L N I + I+P E+ K ++ L+L ++D QF + ++LASFD +I F V IK + N + +LLTT+ DY+ IF++ + Q K QLI N K S L++ + GNKIT + PY FSKGA +R GD IK ++ GQL+YERL TGDIVQGLP++ +ILEAR PKVEA ++ I K I++ D+LI I PN + S LLI+K++ + + Q LTEG LNPHT+L +YF Y+ S+ LS+Y+++Y S KK+Q FLL SVQ +Y SQGV I+ KH+E+I+++MT+++ I YPG T FL GD+++L+Q +YIN L + K+ F+PILLGITKS+LK +GFL+AASFQ TTRVLT A+++G+ DW+ GLKEN I G+LIP GTGFY + D +Y K+ +P +N +N N+K ++K + ++ IKF+Y
Sbjct: 1 MLRKSKIFSNNIINKKELKKIIEWAFNNYGQRKAAYFVDQLKEMGFKYATKSGISISIEDLRIPASKVTLMQAATKEVFFTESRANNGAITEVERFQKIISIWNRTSEELKESLIDFLKRNDPLNSVYVMAFSGARGNISQVRQLIGMRGLMSDPNGQIIDRAITANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISQLDCQTKRGIVLQQ---DSKEFLSTKELLYGRILASSICKPKTKEIIGFRNQLVTSSLIEQIIKFNIPKILIRSPLTCECRRSICQHCYGENLASGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGQLTRQGRAECSGYVIFLPTLKVIPYRTSYGEDVVMSENQSSLKIINYANKDIKVKVESRTLILVNNHNYIKRNQVLFEAAPKIKDINLAKKEIKYIYVKEGGEIILERNGFPQNCESEDFTKRSRKNYIFWVLSGRVFSLSFNINLKARKLENIYKNQALAQSKIITTIGGFIYIYRCKLTQRVMGLKVQNSFQGQNNFKIFLENNNLEILHCKIYLSHNDEIILKPKLFQNRIFSIGFLQNNKYKTKTGGYFYISNYYKPNLLKSNEINKLNYKLKFGSTIFYIPEATIQTNTNKKDFRFKDGSYIERHQEIFPNYFATIAGFLKLEGEK-QIKCVTIKPGEKYLLEDNIDFFRTLSEQVYFPGELIGNQFSIKVLSYLEIIADNNNIYLYIRPIIRYEFTTLSCNKILKSNIFNITNLKINNFNLRVSSGQQIQIDEPIQILDSTITIDSFLQSNDTEVLFEFKEVKRKNSYIKVNLFYSQNFIFDNIIPNEIKKTDIFLNLIVEDNQFTDPYSILASFDTLIQFNNFVYTIKTKRNNIKSNMLLTTKSDYQEIFLDTHNHQYKQAQLIYRNSLFPNNVCIKNSGLLKSVIGNKITLHLGEPYFFSKGALIRKLPGDYIKKQENFGQLIYERLKTGDIVQGLPKIADILEARRPKVEALLSTRQSFI-KAIKYT--------------DELIIIITKPNRGYEYFTTPRSERLLIKKYESICIGQPLTEGPLNPHTLLHIYFHYFYSLGTLSIYESAYRSLKKLQIFLLMSVQDIYMSQGVIISGKHVELIVREMTHKVYIEYPGKTTFLPGDIIDLDQAQYINQSLKTRYKLGFRPILLGITKSSLKTDGFLAAASFQETTRVLTHAALQGKTDWLRGLKENAITGRLIPAGTGFYLDQDITYNKILLPNRLINKKNNLNLKKQLRSKQKQFKNLIKFKY 1272
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: D1J789_ECTSI (DNA-directed RNA polymerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J789_ECTSI) HSP 1 Score: 1107 bits (2864), Expect = 0.000e+0 Identity = 593/1287 (46.08%), Postives = 832/1287 (64.65%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDI--LFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEK----QNFFNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN-----------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNNLFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFINFLENYSN--IFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMP--TLNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M+++SN+F NN +NKKELK II WAFKN+G KAAY VD+LK++GF+YATK+GISIS+EDL+IPP K +L+R A + E + GEI+EVER Q++I IWN TSE LKER+I++F++ DPLNSVYIMAFSGARGNI+QVRQLVGMRGLMSDP+G+IID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDC+++RGI ++E ++D D L E + GRVLA +I P TK IIA++N+ IT L E ++K N ++VRSPLTCECRR++CQ CYG NLA GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFTS+ RQ R SGY+ F S L RT YG+ L+ EN S++ +ITY N+I + I +II N+ ++ N +L E PK K M + V A+ G+I +E+ Q+F QN RK + W+LSG V F T ++ L I K+Q++ QSKI G+++F +N +T +++ K ++ KI +ES +I+ CK+YL+ I L P ++K + + G L KYKTKTGGNFY +N + + + GS++FY+P++T + K G YV K EI+ +YFI I G I FD + I IKPG L + + QI+YPGE+I D FE+ SYIE S FL +RP+ RYE N N+F P + ++ + +IS +IK + PI FI+ I++ + + + FE + + ++ I + + ++PKE+ K ++ ++L +++KQF + T++ +FD + PF T+L IKK+ + +ILLTT+ DY+ IF++ Q + + K K + +E L++++ GNK+ + Y FS GA +R GD I+ ++ LGQL++ERLITGDIVQGLP++ ILEAR PK+E+ ++ PG I + + I I K S I+ S L++RK++ V+V Q LT+G+LNPHT+L VYF+Y+CS+ +LS Y+++Y S KK+Q LL SVQA+Y SQGV I+ KH+E+I+++MT+++ + PG TNFL GD+++LEQ +YIN C+ ++ F+PILLGITKS+LK + FL+AASFQ TTRVLT A+I+G+ DW+ GLKEN I G+LIP GTGFY N D ++ KV +P + N N +K + K KL+ ++F+Y
Sbjct: 1 MLKRSNIFSNNTINKKELKKIIEWAFKNYGQRKAAYFVDQLKEMGFEYATKSGISISIEDLRIPPVKIDLMRRASFDAFLTEAQAKNGEITEVERFQRIIYIWNTTSEELKERLIEFFKKTDPLNSVYIMAFSGARGNIAQVRQLVGMRGLMSDPSGRIIDRAIGANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCKTERGIFLQESVKDKDEKGFLPLTELLNGRVLASSIFKPGTKKIIAFRNQEITSSLVENLIKANITKVLVRSPLTCECRRAVCQHCYGWNLALGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTSELIRQGRVNYSGYLDFMSELKLCPYRTEYGQAALLSENNSWLGIITYENKIIRLPIPEDTIIFSKNHKYITDNQVLLEAAPKMKEMTLGEKEIKYVNARHPGQIFLEENSCPQDFLTQN-IAEFRKRGQKNYSFWVLSGEVLPTAFDTIIRARILEKIYKDQSIAQSKIVTTIGGFVRFSRNKSTQELLGLKTQNTTREQSIFKIFIESNHIEISNCKVYLSHTYQIILKPQLINKRLFSFGSLCNNKYKTKTGGNFYISNLYKPRPIGKKLNNKVKSGSTIFYLPKATIRTGSNEKEFKFKKGSYVKKHDEIFPDYFISINGFINFD-IAAQTKSITIKPGEKHRVDKELKFYTDLNEQIYYPGELILDKFEVTVLSYIEFESNAGKTFLYIRPITRYEFTNEYPRQILNSNYFAPLNLIVEDFKVQIISGQEIKIDKPIQFIESPLIIDYSLDLDDTELVFEFKKPEKKNSPSKINFIYSQICLFDTVIPKEIKKTDIEVNLLVEEKQFTDPYTIIGAFDTLSPFNNTILSIKKKCNRVRSEILLTTKTDYREIFLDSFSHQYEEKKFFKTNKLFNNDIIIREDGLLKEVKGNKLVLHLGQSYFFSNGALVRKIPGDYIRRQETLGQLIFERLITGDIVQGLPKINNILEARKPKIESLLSTRPGFINSI--RYTSNFIVIGTKPS-------IKNDYYKASRSQRLVVRKYESVSVGQPLTQGSLNPHTLLHVYFRYFCSLGLLSTYESAYRSLKKLQGLLLTSVQAIYVSQGVMISSKHVELIVREMTHKVYVESPGKTNFLPGDIIDLEQAQYINLCIKNNNQLGFRPILLGITKSSLKTDSFLAAASFQETTRVLTGAAIQGKTDWLRGLKENAITGRLIPAGTGFYINKDITFTKVLVPEKSANEEQNLTLKAQLKVKEAKLKKLVRFKY 1276
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Match: A0A1I9LV94_9PHAE (DNA-directed RNA polymerase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LV94_9PHAE) HSP 1 Score: 1107 bits (2862), Expect = 0.000e+0 Identity = 595/1288 (46.20%), Postives = 836/1288 (64.91%), Query Frame = 1
Query: 1 MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATKAGISISLEDLKIPPSKTNLVRDALANTVEAEWETIKGEISEVERLQKVINIWNITSETLKERVIKYFQEKDPLNSVYIMAFSGARGNISQVRQLVGMRGLMSDPNGQIIDIPIQSNFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVDIAQSVVIRELDCRSQRGIKIKEIIEDNDI--LFSLQERIVGRVLACNIIDPRTKTIIAYKNELITPRLAEKIMKYNNNSIIVRSPLTCECRRSICQKCYGNNLATGNLVELGEPVGIIAAQSIGEPGTQLTMRTFHTGGVFTSDFSRQVRAQCSGYIKFSSTLNTRELRTNYGKDVLVCENQSFIKLITYTNQIKEIKIFPKSIIIVGNNSFVKKNDILFELPPKNKMMQDDASALNDVIAKQSGEIIIEKQNF---FNQNKTLNVRKSNIVHNLVWILSGYVTKIPFATKLKIYPLMNISKNQNLTQSKITNKFSGYIKFIKNLNTSKIIRFKLISSLGMCQKQKIILESKDTKITQCKIYLAKFGSIYLNPYPLDKSVLTLGCLKLLKYKTKTGGNFYSTN-----------SQRTEYGSSVFYIPESTYNINFDVTALKVNFGDYVNKKTEIYKNYFIDIAGIIQFDETKPNNREIIIKPGYIIPFPNSLIDILEYDGQIFYPGEIIFDNFEINTASYIEVCSIKNN--LFLLLRPVIRYEIPNPENFNNFFPNWFDPHQIELDQVPLNLISEMKIKTENPIYFIKHHFFIN-FLE-NYSNIFFEINQATQPDNYGYFKLILGTNIIPEKILPKEMFKEEVRLSLFIQDKQFVEQETLLASFDVIIPFATTVLGIKKQIKNKQKKILLTTEQDYKVIFIEDTDFQLKNNQLIKLGKKIGTNFFNKESRLIEQISGNKITFRISHPYLFSKGAQLRIESGDLIKLKDVLGQLVYERLITGDIVQGLPRVEEILEARHPKVEAKVAPYPGIITKVIEHQVNTLIWIKHKGSRFDQLINIEGSPNSIQGSPNLLIRKFDFVNVCQCLTEGTLNPHTILDVYFQYYCSIKILSMYQASYYSFKKVQFFLLNSVQAVYYSQGVFIADKHLEIIIKQMTNRIEIIYPGDTNFLSGDLLELEQVRYINACLSKKRKIYFKPILLGITKSALKAEGFLSAASFQYTTRVLTQASIEGRVDWITGLKENVIVGKLIPCGTGFYSNNDFSYLKVKMPT--LNNNHNSNIKNDDQTKHHKLRSAIKFRY 3798
M+++SN+F NN +NKKELK II WAF N+G KAAY VD+LK+IGF+YATK+GISIS+EDLK+PP K L++ A ++ + E + GEI+EVER Q++I IWN TSE LKER+I++F++ DPLNSVYIMAFSGARGNISQVRQLVGMRGLM DP+G+IID I +NFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLV++AQS++I ELDCR+QRG+ ++E I+D D SL E + GRVLA +I +P TK IIA++N+ IT L E ++K+ I+VRSPLTCECRR++CQ CYG NLA GNLVELGE VG+IAAQSIGEPGTQLTMRTFHTGGVFT + RQ R GY+ F S + R RT YG+D L+ EN+S+I +ITY N I + I +II N+ +V N +L E PK + M + V A SG+I +EK +N+ + RK + + W+LSG V I F T ++ L I K Q++ QSKI G+IKF K +T +I+ K+ + + KI +ES +++ CKIYL+ I L P ++K + + G L YKTKTGG+FY +N + + + GS++FY+PE+T + K G YV K EI+ + F+ I G I F+ +P + I IKPG I + + QI+YPGE I D FE+ SY+E+ NN +L +RP+ RYE N F N F P + ++ + +IS KIK + PI FI ++ F++ + + + FE+ + + ++ GY + I + + ++PK + K ++ ++ +++ QF + T++ +FD + P + IKK+ + ++L+TT +Y+ IF++ + + ++ K K + E L++++ GNKI + Y FS GA +R GD I+ ++ LGQL++ERLITGDIVQGLP++ ILEAR PK+E+ ++ PG I+ I++ N +I I K S I+ S LL+RK + ++V Q LT+G+LNPHT+L VYF+Y+CS+ +LS Y+A+Y S KK+Q LL SVQA+Y SQGV I+ KH+E+II++MT ++ + YPG+TNFL GD+++L+Q +YIN C+ K ++ F+PILLGITKS+LK + FL+AASFQ TTRVLT A+I+G+ DW+ GLKEN I G+LIP GTGFY N D + KV +P L N +K+ + K KL+ I+F+Y
Sbjct: 1 MVKRSNIFSNNTINKKELKKIIEWAFTNYGQRKAAYFVDQLKEIGFEYATKSGISISIEDLKVPPVKIELMKRASSDAILTEAQAKNGEITEVERFQRLIYIWNSTSEELKERLIEFFKKTDPLNSVYIMAFSGARGNISQVRQLVGMRGLMCDPSGRIIDKAIAANFREGLSITDYIISSYGARKGLVDTAIKTADSGYLTRRLVEVAQSIIISELDCRTQRGVFLQEGIDDEDEKGFLSLTELLKGRVLASSIFEPGTKKIIAFRNQQITSSLVEMLIKFKIYKILVRSPLTCECRRAVCQHCYGWNLALGNLVELGETVGLIAAQSIGEPGTQLTMRTFHTGGVFTGELIRQARITFCGYLDFMSEVKLRPYRTQYGEDALLAENKSWIGIITYGNNILRLSIAEDTIIFSENHQYVSNNQVLLEAAPKRREMTLGEKEIKYVNAIHSGKIFLEKNGSPQDYNKQNIVKFRKRSKRNYSFWVLSGNVLSIGFETVIRARILEKIYKEQSIAQSKIVTTIGGFIKFFKTKSTQEILGLKIQNYIDGKSIFKIFIESTHIEVSNCKIYLSHIHQIILKPQIINKQLFSFGYLCNNNYKTKTGGSFYISNLYKPRPLVNKLNNKLKSGSTIFYLPEATIQTDSKEKEFKFKNGGYVKKYEEIFPDCFVSIDGFINFEVEEPT-KYITIKPGQKYILDKEFIFYKDLNEQIYYPGEFILDEFEVYVLSYLELEHNHNNGETYLYVRPITRYEFTNEYPFQFLNSNSFAPLNLIVEDFKVKIISGQKIKIDKPIQFIDSRLILDCFIDLDDTELVFEVKKPNKKNSPGYIRFIYSQIFLFDNVMPKGINKTDLEFNILVEENQFTDPYTIIGTFDTLSPSNNIISSIKKKCNRIRSELLVTTTSNYREIFLDSFNNNYEEHKFFKTNKLCDNDLLIYEDGLVKEVQGNKIVLHLGQSYFFSTGALIRKIPGDYIRQQETLGQLIFERLITGDIVQGLPKINNILEARKPKIESLISTRPGFISS-IQYTTNFII-ISTKPS-------IKNDYYKANRSQRLLVRKSESISVGQPLTQGSLNPHTLLHVYFRYFCSLGVLSSYEAAYISLKKLQGLLLRSVQAIYVSQGVMISGKHVELIIREMTYKVYVEYPGNTNFLPGDIIDLDQAQYINLCIKKNNQLVFRPILLGITKSSLKTDSFLAAASFQETTRVLTGAAIQGKTDWLRGLKENAITGRLIPAGTGFYINKDATSNKVLLPQKGLKEEDNVTLKSALKLKESKLKKLIRFKY 1278 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig110.2402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig110.2402.1 >prot_S-ischiensis_contig110.2402.1 ID=prot_S-ischiensis_contig110.2402.1|Name=mRNA_S-ischiensis_contig110.2402.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=1269bp MIEQSNLFCNNVLNKKELKTIIAWAFKNFGSLKAAYLVDELKDIGFQYATback to top mRNA from alignment at S-ischiensis_contig110:50684..54490+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig110.2402.1 ID=mRNA_S-ischiensis_contig110.2402.1|Name=mRNA_S-ischiensis_contig110.2402.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3807bp|location=Sequence derived from alignment at S-ischiensis_contig110:50684..54490+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig110:50684..54490+ >mRNA_S-ischiensis_contig110.2402.1 ID=mRNA_S-ischiensis_contig110.2402.1|Name=mRNA_S-ischiensis_contig110.2402.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=7614bp|location=Sequence derived from alignment at S-ischiensis_contig110:50684..54490+ (Schizocladia ischiensis KU_0333)back to top |