mRNA_S-ischiensis_contig11.2348.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A835YQB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB2_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.130e-90 Identity = 141/197 (71.57%), Postives = 167/197 (84.77%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
RMWA EGD+M+E ER E+DAL VL E +KKKELKPVDH ++Y P RKNLYIVP+AL++L E+V+ R +EIK+RGKGCPPPVETWEQCGL DR+ +V+ + F APF IQRQALPA+MSGRDVIGVA+TGSGKTLAF+LP+ RHI DQ LGEGEGP+GLI+APARELAVQIY EA++FTKALG+RVTAVYG
Sbjct: 34 RMWASEGDIMDEGERAGKEKDALAVLAEQMKKKELKPVDHAAIDYLPIRKNLYIVPRALAALTSEQVQAARAALEIKIRGKGCPPPVETWEQCGLRDRVLAVITRLGFGAPFAIQRQALPALMSGRDVIGVARTGSGKTLAFLLPLFRHILDQPPLGEGEGPIGLIMAPARELAVQIYTEAKKFTKALGLRVTAVYG 230
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A6H5K7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K3_9PHAE) HSP 1 Score: 284 bits (727), Expect = 7.530e-86 Identity = 138/197 (70.05%), Postives = 167/197 (84.77%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
RM+AGEGD+MEE+ER+KVEQDALQ+LQ+S+KKKELKPVDH + Y RKNLYI+PK L+ E+ E R +++IKVRGKGCPP + +WEQCG DR+ +V+ + F PF IQ+QA+PA+MSGRDVIGVA TGSGKTLAF+LP+LRHI DQ LGEGEGP+GLI+APARELAVQIYNEAR+FTKALG+RVTAVYG
Sbjct: 483 RMFAGEGDIMEEYERDKVEQDALQLLQDSMKKKELKPVDHSKISYINVRKNLYIIPKVLAMASEEKKENDRLELDIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEKPFAIQKQAMPALMSGRDVIGVASTGSGKTLAFLLPLLRHIFDQPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYG 679
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2MCY9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCY9_9STRA) HSP 1 Score: 275 bits (703), Expect = 1.570e-82 Identity = 134/203 (66.01%), Postives = 170/203 (83.74%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSL-PPE---EVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
RMWA EGDVMEEHER E++AL++LQE+++KKEL PVDH L++Y P RKN+YI+PKAL+ L PE E+ +R D+EIK+RG+GCPPPV+TW CG+ DR+ + + + +APF +Q+QA+PAIMSGRD+IG+AKTGSGKTLAF+LPM RHI DQ LGEGEGP+GLILAPARELAVQIYNEA++FTK+LG+RVTA+YG
Sbjct: 455 RMWASEGDVMEEHERNNEEENALEMLQEAMRKKELAPVDHTLVDYIPIRKNMYILPKALAHLLKPENAKELNAKREDLEIKIRGRGCPPPVDTWAHCGISDRVLAQLTRVYGPDSAPFAVQKQAIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQPVLGEGEGPIGLILAPARELAVQIYNEAKKFTKSLGLRVTAIYG 657
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2WWQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWQ9_9STRA) HSP 1 Score: 263 bits (672), Expect = 4.610e-78 Identity = 133/203 (65.52%), Postives = 163/203 (80.30%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLP----PEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
R++ +GDVMEEHERE E+ AL+ LQE+LKKKEL PVDH L++Y RKNLYIVP+ L+ L +++ R +EIKVRG+GCPPPVETW+QCGL DR+ + K + + PF +Q+QA+PAIMSGRDVIG+AKTGSGKTLAF+LPM+RHI DQ LGEGEGPVGLI+APARELAVQIY EAR+FTKAL +RVTA+YG
Sbjct: 533 RIFGDDGDVMEEHEREDQEKSALETLQEALKKKELAPVDHTLIDYISVRKNLYIVPRVLAPLARLENAKQLAELREKLEIKVRGRGCPPPVETWDQCGLPDRVLKQLRKVLGEDSTPFAVQKQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMIRHILDQPPLGEGEGPVGLIMAPARELAVQIYKEARKFTKALALRVTAIYG 735
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S1TZQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ2_9STRA) HSP 1 Score: 243 bits (620), Expect = 5.700e-74 Identity = 124/200 (62.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
R++ EGDVM+E ER K +DA+ ++ KKKE++PVDH ++Y PFRKNLYIVP+AL+ L +EV+ RR M IKVRG+ CPPPVE W CGL DR+ S++ + + PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ LGEG GP+GLI+APARELAVQI EAR+F +A +RV AVYG
Sbjct: 33 RLFESEGDVMDEVERMKQLEDAVLAMEAEAKKKEVRPVDHAAIDYIPFRKNLYIVPRALARLTQKEVQHRRDRMGIKVRGRACPPPVEKWSHCGLSDRLESLLLRHHWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMYRHILDQLAKYPLGEGRGPIGLIMAPARELAVQIAAEARKFARAFDLRVAAVYG 232
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: W7TCV9_9STRA (Dead-box atp-dependent rna helicase 42-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCV9_9STRA) HSP 1 Score: 248 bits (632), Expect = 2.350e-73 Identity = 127/202 (62.87%), Postives = 156/202 (77.23%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
R++ +GD+ EE E E + AL++LQE +KKKELKPVDH ++Y P RK LYIVP+AL E+ RRR +EIKVRGKGCP P+ETWEQ GL DR+ ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ LGEGEGP+G+++APARELAVQI+ EA++F + LG+R AVYG
Sbjct: 138 RLFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 339
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A813BM93_9DINO (Ddx46 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BM93_9DINO) HSP 1 Score: 228 bits (581), Expect = 1.160e-72 Identity = 109/166 (65.66%), Postives = 131/166 (78.92%), Query Frame = 3
Query: 96 KKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
KK+LKPVDH +EY P RKN YI + +++L PEEV+ R ++EI++RGK CP P++ + QCGL DRI V+ K + APF IQRQA+PAIMSGRDVI VAKTGSGKTLAF+LPM RH+ DQ +G GEGPVGLI+APARELA QIY EAR+F K L MRVTAVYG
Sbjct: 3 KKDLKPVDHAQVEYMPIRKNFYIEAREIAALTPEEVQEIRNELEIRIRGKNCPRPIKYFTQCGLSDRILKVLEKLGYEAPFAIQRQAIPAIMSGRDVIAVAKTGSGKTLAFLLPMFRHVLDQPRVGAGEGPVGLIMAPARELAAQIYREARKFAKVLNMRVTAVYG 168
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7R9U272_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U272_9STRA) HSP 1 Score: 244 bits (624), Expect = 7.410e-72 Identity = 122/200 (61.00%), Postives = 157/200 (78.50%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
R++ EGDVM+E ER++ E++A+ ++ KKKE+KPV+H ++Y PFRKNLYIVP+AL+ L +EV+ +R M IKVRG+ CPPPV+ W QCGL DR+ S++ K + PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ L EGEGP+GLI+APARELAVQI +EAR+F ++ +RV AVYG
Sbjct: 333 RLFESEGDVMDEEERKRQEEEAIASIEAEAKKKEVKPVNHDEIDYIPFRKNLYIVPRALARLTQKEVQGKRDKMGIKVRGRACPPPVDKWSQCGLSDRLESLLLKHSWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHILDQVATYPLDEGEGPIGLIMAPARELAVQIASEARKFARSFNLRVAAVYG 532
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A4D9CQL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQL0_9STRA) HSP 1 Score: 244 bits (624), Expect = 1.910e-71 Identity = 126/202 (62.38%), Postives = 155/202 (76.73%), Query Frame = 3
Query: 3 RMWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
R++ +GD+ EE E E + AL++LQE +KKKELK VDH ++Y P RK LYIVP+AL E+ RRR +EIKVRGKGCP P+ETWEQ GL DR+ ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ LGEGEGP+G+++APARELAVQI+ EA++F + LG+R AVYG
Sbjct: 562 RLFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKAVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 763
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S4D7A6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A6_HETAK) HSP 1 Score: 229 bits (584), Expect = 9.840e-69 Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = 3
Query: 114 VDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
V+H ++Y P RKNL+I+PK L+ L EEV++ R ++IK+RGKGCPPPV TWE+CG +R+ V+ K PFPIQRQA PAIM GRDVIGVAKTGSGKTLAFVLP+LRHI DQ LGEGEGP+GLI+APARELA QIY++A++FTK LG+R TAVYG
Sbjct: 82 VNHDEIDYLPIRKNLFILPKKLAKLKAEEVKKIRDGLQIKIRGKGCPPPVATWEECGFSERVLKVIQKLGLKEPFPIQRQAFPAIMGGRDVIGVAKTGSGKTLAFVLPLLRHILDQPPLGEGEGPIGLIMAPARELAFQIYDQAKKFTKMLGLRCTAVYG 241 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2348.1 >prot_S-ischiensis_contig11.2348.1 ID=prot_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNback to top mRNA from alignment at S-ischiensis_contig11:3225355..3228078- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2348.1 ID=mRNA_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2724bp|location=Sequence derived from alignment at S-ischiensis_contig11:3225355..3228078- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:3225355..3228078- >mRNA_S-ischiensis_contig11.2348.1 ID=mRNA_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1176bp|location=Sequence derived from alignment at S-ischiensis_contig11:3225355..3228078- (Schizocladia ischiensis KU_0333)back to top |