mRNA_S-ischiensis_contig11.2348.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig11.2348.1
Unique NamemRNA_S-ischiensis_contig11.2348.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A835YQB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB2_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.130e-90
Identity = 141/197 (71.57%), Postives = 167/197 (84.77%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            RMWA EGD+M+E ER   E+DAL VL E +KKKELKPVDH  ++Y P RKNLYIVP+AL++L  E+V+  R  +EIK+RGKGCPPPVETWEQCGL DR+ +V+ +  F APF IQRQALPA+MSGRDVIGVA+TGSGKTLAF+LP+ RHI DQ  LGEGEGP+GLI+APARELAVQIY EA++FTKALG+RVTAVYG
Sbjct:   34 RMWASEGDIMDEGERAGKEKDALAVLAEQMKKKELKPVDHAAIDYLPIRKNLYIVPRALAALTSEQVQAARAALEIKIRGKGCPPPVETWEQCGLRDRVLAVITRLGFGAPFAIQRQALPALMSGRDVIGVARTGSGKTLAFLLPLFRHILDQPPLGEGEGPIGLIMAPARELAVQIYTEAKKFTKALGLRVTAVYG 230          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A6H5K7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K3_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 7.530e-86
Identity = 138/197 (70.05%), Postives = 167/197 (84.77%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            RM+AGEGD+MEE+ER+KVEQDALQ+LQ+S+KKKELKPVDH  + Y   RKNLYI+PK L+    E+ E  R +++IKVRGKGCPP + +WEQCG  DR+ +V+ +  F  PF IQ+QA+PA+MSGRDVIGVA TGSGKTLAF+LP+LRHI DQ  LGEGEGP+GLI+APARELAVQIYNEAR+FTKALG+RVTAVYG
Sbjct:  483 RMFAGEGDIMEEYERDKVEQDALQLLQDSMKKKELKPVDHSKISYINVRKNLYIIPKVLAMASEEKKENDRLELDIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEKPFAIQKQAMPALMSGRDVIGVASTGSGKTLAFLLPLLRHIFDQPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYG 679          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2MCY9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCY9_9STRA)

HSP 1 Score: 275 bits (703), Expect = 1.570e-82
Identity = 134/203 (66.01%), Postives = 170/203 (83.74%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSL-PPE---EVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            RMWA EGDVMEEHER   E++AL++LQE+++KKEL PVDH L++Y P RKN+YI+PKAL+ L  PE   E+  +R D+EIK+RG+GCPPPV+TW  CG+ DR+ + + +     +APF +Q+QA+PAIMSGRD+IG+AKTGSGKTLAF+LPM RHI DQ  LGEGEGP+GLILAPARELAVQIYNEA++FTK+LG+RVTA+YG
Sbjct:  455 RMWASEGDVMEEHERNNEEENALEMLQEAMRKKELAPVDHTLVDYIPIRKNMYILPKALAHLLKPENAKELNAKREDLEIKIRGRGCPPPVDTWAHCGISDRVLAQLTRVYGPDSAPFAVQKQAIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQPVLGEGEGPIGLILAPARELAVQIYNEAKKFTKSLGLRVTAIYG 657          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2WWQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWQ9_9STRA)

HSP 1 Score: 263 bits (672), Expect = 4.610e-78
Identity = 133/203 (65.52%), Postives = 163/203 (80.30%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLP----PEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            R++  +GDVMEEHERE  E+ AL+ LQE+LKKKEL PVDH L++Y   RKNLYIVP+ L+ L      +++   R  +EIKVRG+GCPPPVETW+QCGL DR+   + K   + + PF +Q+QA+PAIMSGRDVIG+AKTGSGKTLAF+LPM+RHI DQ  LGEGEGPVGLI+APARELAVQIY EAR+FTKAL +RVTA+YG
Sbjct:  533 RIFGDDGDVMEEHEREDQEKSALETLQEALKKKELAPVDHTLIDYISVRKNLYIVPRVLAPLARLENAKQLAELREKLEIKVRGRGCPPPVETWDQCGLPDRVLKQLRKVLGEDSTPFAVQKQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMIRHILDQPPLGEGEGPVGLIMAPARELAVQIYKEARKFTKALALRVTAIYG 735          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S1TZQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ2_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.700e-74
Identity = 124/200 (62.00%), Postives = 153/200 (76.50%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            R++  EGDVM+E ER K  +DA+  ++   KKKE++PVDH  ++Y PFRKNLYIVP+AL+ L  +EV+ RR  M IKVRG+ CPPPVE W  CGL DR+ S++ +  +  PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ     LGEG GP+GLI+APARELAVQI  EAR+F +A  +RV AVYG
Sbjct:   33 RLFESEGDVMDEVERMKQLEDAVLAMEAEAKKKEVRPVDHAAIDYIPFRKNLYIVPRALARLTQKEVQHRRDRMGIKVRGRACPPPVEKWSHCGLSDRLESLLLRHHWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMYRHILDQLAKYPLGEGRGPIGLIMAPARELAVQIAAEARKFARAFDLRVAAVYG 232          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: W7TCV9_9STRA (Dead-box atp-dependent rna helicase 42-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCV9_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.350e-73
Identity = 127/202 (62.87%), Postives = 156/202 (77.23%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            R++  +GD+ EE E    E  + AL++LQE +KKKELKPVDH  ++Y P RK LYIVP+AL      E+ RRR  +EIKVRGKGCP P+ETWEQ GL DR+  ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ     LGEGEGP+G+++APARELAVQI+ EA++F + LG+R  AVYG
Sbjct:  138 RLFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 339          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A813BM93_9DINO (Ddx46 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BM93_9DINO)

HSP 1 Score: 228 bits (581), Expect = 1.160e-72
Identity = 109/166 (65.66%), Postives = 131/166 (78.92%), Query Frame = 3
Query:   96 KKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            KK+LKPVDH  +EY P RKN YI  + +++L PEEV+  R ++EI++RGK CP P++ + QCGL DRI  V+ K  + APF IQRQA+PAIMSGRDVI VAKTGSGKTLAF+LPM RH+ DQ  +G GEGPVGLI+APARELA QIY EAR+F K L MRVTAVYG
Sbjct:    3 KKDLKPVDHAQVEYMPIRKNFYIEAREIAALTPEEVQEIRNELEIRIRGKNCPRPIKYFTQCGLSDRILKVLEKLGYEAPFAIQRQAIPAIMSGRDVIAVAKTGSGKTLAFLLPMFRHVLDQPRVGAGEGPVGLIMAPARELAAQIYREARKFAKVLNMRVTAVYG 168          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7R9U272_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U272_9STRA)

HSP 1 Score: 244 bits (624), Expect = 7.410e-72
Identity = 122/200 (61.00%), Postives = 157/200 (78.50%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            R++  EGDVM+E ER++ E++A+  ++   KKKE+KPV+H  ++Y PFRKNLYIVP+AL+ L  +EV+ +R  M IKVRG+ CPPPV+ W QCGL DR+ S++ K  +  PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ     L EGEGP+GLI+APARELAVQI +EAR+F ++  +RV AVYG
Sbjct:  333 RLFESEGDVMDEEERKRQEEEAIASIEAEAKKKEVKPVNHDEIDYIPFRKNLYIVPRALARLTQKEVQGKRDKMGIKVRGRACPPPVDKWSQCGLSDRLESLLLKHSWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHILDQVATYPLDEGEGPIGLIMAPARELAVQIASEARKFARSFNLRVAAVYG 532          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A4D9CQL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQL0_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.910e-71
Identity = 126/202 (62.38%), Postives = 155/202 (76.73%), Query Frame = 3
Query:    3 RMWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            R++  +GD+ EE E    E  + AL++LQE +KKKELK VDH  ++Y P RK LYIVP+AL      E+ RRR  +EIKVRGKGCP P+ETWEQ GL DR+  ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ     LGEGEGP+G+++APARELAVQI+ EA++F + LG+R  AVYG
Sbjct:  562 RLFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKAVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 763          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S4D7A6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A6_HETAK)

HSP 1 Score: 229 bits (584), Expect = 9.840e-69
Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = 3
Query:  114 VDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 593
            V+H  ++Y P RKNL+I+PK L+ L  EEV++ R  ++IK+RGKGCPPPV TWE+CG  +R+  V+ K     PFPIQRQA PAIM GRDVIGVAKTGSGKTLAFVLP+LRHI DQ  LGEGEGP+GLI+APARELA QIY++A++FTK LG+R TAVYG
Sbjct:   82 VNHDEIDYLPIRKNLFILPKKLAKLKAEEVKKIRDGLQIKIRGKGCPPPVATWEECGFSERVLKVIQKLGLKEPFPIQRQAFPAIMGGRDVIGVAKTGSGKTLAFVLPLLRHILDQPPLGEGEGPIGLIMAPARELAFQIYDQAKKFTKMLGLRCTAVYG 241          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQB2_9STRA1.130e-9071.57P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5K7K3_9PHAE7.530e-8670.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MCY9_9STRA1.570e-8266.01Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2WWQ9_9STRA4.610e-7865.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZQ2_9STRA5.700e-7462.00Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
W7TCV9_9STRA2.350e-7362.87Dead-box atp-dependent rna helicase 42-like protei... [more]
A0A813BM93_9DINO1.160e-7265.66Ddx46 protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
A0A7R9U272_9STRA7.410e-7261.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CQL0_9STRA1.910e-7162.38Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4D7A6_HETAK9.840e-6966.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:3225355..3228078 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score231.9
Seed ortholog evalue2.6e-58
Seed eggNOG ortholog44056.XP_009035497.1
KEGG koko:K12811
KEGG Pathwayko03040,map03040
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0334@2759
EC3.6.4.13
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03041
Hectar predicted targeting categoryother localisation
Exons3
Model size593
Cds size588
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2348.1prot_S-ischiensis_contig11.2348.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig11 3225355..3228073 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.420037-CDS-S-ischiensis_contig11:3225354..32257201622815617.420037-CDS-S-ischiensis_contig11:3225354..3225720Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3225355..3225720 -
1695739806.8769174-CDS-S-ischiensis_contig11:3225354..32257201695739806.8769174-CDS-S-ischiensis_contig11:3225354..3225720Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3225355..3225720 -
1622815617.4336674-CDS-S-ischiensis_contig11:3226801..32269541622815617.4336674-CDS-S-ischiensis_contig11:3226801..3226954Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3226802..3226954 -
1695739806.8911552-CDS-S-ischiensis_contig11:3226801..32269541695739806.8911552-CDS-S-ischiensis_contig11:3226801..3226954Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3226802..3226954 -
1622815617.4464266-CDS-S-ischiensis_contig11:3228004..32280731622815617.4464266-CDS-S-ischiensis_contig11:3228004..3228073Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3228005..3228073 -
1695739806.9015136-CDS-S-ischiensis_contig11:3228004..32280731695739806.9015136-CDS-S-ischiensis_contig11:3228004..3228073Schizocladia ischiensis KU_0333CDSS-ischiensis_contig11 3228005..3228073 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815617.4623137-UTR-S-ischiensis_contig11:3228073..32280781622815617.4623137-UTR-S-ischiensis_contig11:3228073..3228078Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 3228074..3228078 -
1695739806.9103725-UTR-S-ischiensis_contig11:3228073..32280781695739806.9103725-UTR-S-ischiensis_contig11:3228073..3228078Schizocladia ischiensis KU_0333UTRS-ischiensis_contig11 3228074..3228078 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig11.2348.1

>prot_S-ischiensis_contig11.2348.1 ID=prot_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp
MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKN
LYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRS
VVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIA
DQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG
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mRNA from alignment at S-ischiensis_contig11:3225355..3228078-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig11.2348.1 ID=mRNA_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2724bp|location=Sequence derived from alignment at S-ischiensis_contig11:3225355..3228078- (Schizocladia ischiensis KU_0333)
GGCGGATGTGGGCAGGGGAGGGGGACGTTATGGAGGAGCACGAGAGGGAG AAGGTCGAGCAGGACGCCCTGCAGGTGAGGATAGCTGCCGTATCGTCGGA GAGATGTTGAAGTGATGTGATGTCAAACTACAGTGCATTAGAGTACACGT CACATCGCATCACACACCGTAATCGTCGGAGAGATCTTGCCCCCCCCGTG CCAATTTTTTCGGGAGGGCATTTCTCGCCCGAATGCGGGCGGGATTCGCG CGGGAAAAACTCGGAACATCTCCATCAGGACCCGGGGGAACTTTTCCAAC AGGCTTCCGGGACAATTCAGGACCTTCCCGGCTACAAATATTCCCCCGAA AGTTGTCCCGTGAGGGCAAAATCTCTCCGACGGTTACGGTAGCTGGCCCT TTCGCTGGGAAGGGGTGTGCGCACGCCAAAGCCGTACGAGTGCTGTGCAC GGCTGGGGCAAGAAGGGTTGGGCGAAGCGAGGGGGCGGGTGGTGGCGGCG GTGTGACTCTGGAGGGGTACCTTTGCGCCGCCCGTGTGACAGTCATGTAC GAGCGCGCCTGGTTCCCCCGGGGCAGGGTGAGCACCTGTTTTAATCCGAA ATATCAAGTACTTCGAAGTACCTCACACACGTGCGATTGTACCTCGCTAC AATTTTTGGAATTGCTAGGAATTACTGTGAGAGATGCGAGTTCCGTGCCC CTTCCCAACCTCCTATACTAGGGTGGGGACCTCACCGGAAGCCCTTCTTG GCTCACAGGGCACAAAAATCGTTACAATTTTTTTGCTTCGAAGTATGAAG CACCCCTCTCGCGTCGTCCCTGGAGGTTATCATGCTCCAGTATTGCATAG GGAACAGTACGGGGAACAGCCCCGGGGATGAAAACCGCGTGGCCACTGCC ATATACTGCGAAGTAAAAAAAAACTGCCGCTACCATCACAACCACCACTG TTGCCGCCGCCACCACTACCACTAGCGCGACGCACCGCCACCAACACCGC CACCACCGCCTCTGCCTCCGCCGCCACCACTACCATTACCGCCACCATCG CCTCCGCCGCCGCCTCTGCCGCCGCCGCCGCCACCGCTGCCGCCGCCGCC GCCACCGCCACACCCACCCTGCAGGTCCTCCAAGAGTCGCTGAAGAAGAA AGAGCTCAAGCCCGTGGACCACATTTTGATGGAGTACGAGCCCTTCCGCA AGAACCTGTACATTGTGCCCAAAGCCCTCTCCTCCCTGCCGCCGGAGGAG GTGGAGCGCCGCCGGACGGACATGGAGGTGCGTACTCTAAGCTACATAGC ATACAGACTTGTCCAAGTATGCTTGGAAGTGTGTGCATATATACATATAT ATGTACTCACGTGGTGCTTGCCGTAGTCCCGAGACCATTGACCCCGCGCC TCGTGCGAGACGGAGCAGGATATATATATATATATATATATATATATATA TATATATATACGAGTACATGTACTACGTAGTATGGTCCATGGCCTCGGGA CTACGGCAAGCACAACGTGAGTATATATATATATATATATACCTACCTAG TACTTGGGAAGTATATGAATTATGTACGTACGGCGAACCAGGGGTGGGAG AGGAGAAGAGTCAGAAGACAGCGCACATTTGCTCGTCCCGTTCTGCCACC ACCGGACCCTTTCGCCCCCCCCGGCGTGCTCTTGTCAGGAAAAAAAGCGC GGCGGGGAGCTTTGCTTGCGTGTATGTATCACCTTCCTTCCCCCGGGGGG CCCCCAACGGTTGGTTTGTAGCTCCCCCGCCCGCCTACCTACCTACGCCG TGCGTGTGCCACCCCCGGGGTTCGCTCGCTCCGCTGTGGCGGCGGCGGCG GCCGGCCGGCCGCACCTCTTTCTTTTTTCTTCCCCCCCCCTTCCTTGTTG TTAATTCCTTGATGTGATAGTCACTACTAGAGCTATAGGAACACTCAATG CTTAAATGGGACAACTACAGTGCTAATATGAGAACACTCAATCTCACACA CGTACAATTGTACCTCGTTACAATTTATTTGGAGCGGTAGATAAGCGGCG AGTTGAAGGGCCCGTGCCAAACGGCTCGTCCCGAAACGGGACTCAAGGAA GCCCTTCCTTCCCTCTCATTACAATTTATTTGATTAGTAGATAAGCCGCG AGTTCCAGGCCCCGTGCCAAAAGGCTCGTCCCAACAGGACTCAACGAAGC CCTTCCTTCCCTCGCAGGGCACGAAGAAAAACAAAAAGATCGAAAGAAAG GGGCGGGGCGAGGAAAGGGAAGAGGCGCGGGGAGTCTCTTGTGTTGCAAT TCGTATATGAATCACCTCTTTCTGCTTCTCTCCCTCCCTCCGTCCCTCCC CCCAACAGATCAAGGTCCGGGGCAAGGGCTGCCCGCCCCCCGTGGAGACC TGGGAGCAGTGCGGGCTCGGTGACCGCATCAGGTCCGTCGTACACAAGTG CAAGTTCGCGGCGCCTTTCCCAATCCAGCGGCAGGCCCTGCCGGCCATCA TGTCCGGGCGCGACGTTATCGGCGTGGCCAAGACCGGTTCCGGCAAGACG CTCGCCTTCGTGCTGCCCATGCTTCGGCACATTGCCGATCAGGCGGAGCT CGGGGAGGGGGAGGGCCCCGTGGGGTTAATCCTGGCGCCAGCGCGCGAGC TGGCGGTGCAGATCTACAACGAGGCGCGGCGGTTCACGAAGGCGCTGGGG ATGCGGGTGACGGCGGTGTATGGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig11:3225355..3228078-

>mRNA_S-ischiensis_contig11.2348.1 ID=mRNA_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1176bp|location=Sequence derived from alignment at S-ischiensis_contig11:3225355..3228078- (Schizocladia ischiensis KU_0333)
ATGTGGGCAGGGGAGGGGGACGTTATGGAGGAGCACGAGAGGGAGAAGGT
CGAGCAGGACGCCCTGCAGATGTGGGCAGGGGAGGGGGACGTTATGGAGG
AGCACGAGAGGGAGAAGGTCGAGCAGGACGCCCTGCAGGTCCTCCAAGAG
TCGCTGAAGAAGAAAGAGCTCAAGCCCGTGGACCACATTTTGATGGAGTA
CGAGCCCTTCCGCAAGAACCTGTACATTGTGCCCAAAGCCCTCTCCTCCC
TGCCGCCGGAGGAGGTGGAGCGCCGCCGGACGGACATGGAGGTCCTCCAA
GAGTCGCTGAAGAAGAAAGAGCTCAAGCCCGTGGACCACATTTTGATGGA
GTACGAGCCCTTCCGCAAGAACCTGTACATTGTGCCCAAAGCCCTCTCCT
CCCTGCCGCCGGAGGAGGTGGAGCGCCGCCGGACGGACATGGAGATCAAG
GTCCGGGGCAAGGGCTGCCCGCCCCCCGTGGAGACCTGGGAGCAGTGCGG
GCTCGGTGACCGCATCAGGTCCGTCGTACACAAGTGCAAGTTCGCGGCGC
CTTTCCCAATCCAGCGGCAGGCCCTGCCGGCCATCATGTCCGGGCGCGAC
GTTATCGGCGTGGCCAAGACCGGTTCCGGCAAGACGCTCGCCTTCGTGCT
GCCCATGCTTCGGCACATTGCCGATCAGGCGGAGCTCGGGGAGGGGGAGG
GCCCCGTGGGGTTAATCCTGGCGCCAGCGCGCGAGCTGGCGGTGCAGATC
TACAACGAGGCGCGGCGGTTCACGAAGGCGCTGGGGATGCGGGTGACGGC
GGTGTATGGGATCAAGGTCCGGGGCAAGGGCTGCCCGCCCCCCGTGGAGA
CCTGGGAGCAGTGCGGGCTCGGTGACCGCATCAGGTCCGTCGTACACAAG
TGCAAGTTCGCGGCGCCTTTCCCAATCCAGCGGCAGGCCCTGCCGGCCAT
CATGTCCGGGCGCGACGTTATCGGCGTGGCCAAGACCGGTTCCGGCAAGA
CGCTCGCCTTCGTGCTGCCCATGCTTCGGCACATTGCCGATCAGGCGGAG
CTCGGGGAGGGGGAGGGCCCCGTGGGGTTAATCCTGGCGCCAGCGCGCGA
GCTGGCGGTGCAGATCTACAACGAGGCGCGGCGGTTCACGAAGGCGCTGG
GGATGCGGGTGACGGCGGTGTATGGG
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