prot_S-ischiensis_contig11.2348.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2348.1
Unique Nameprot_S-ischiensis_contig11.2348.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length196
Homology
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A835YQB2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQB2_9STRA)

HSP 1 Score: 288 bits (737), Expect = 8.330e-90
Identity = 140/196 (71.43%), Postives = 166/196 (84.69%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            MWA EGD+M+E ER   E+DAL VL E +KKKELKPVDH  ++Y P RKNLYIVP+AL++L  E+V+  R  +EIK+RGKGCPPPVETWEQCGL DR+ +V+ +  F APF IQRQALPA+MSGRDVIGVA+TGSGKTLAF+LP+ RHI DQ  LGEGEGP+GLI+APARELAVQIY EA++FTKALG+RVTAVYG
Sbjct:   35 MWASEGDIMDEGERAGKEKDALAVLAEQMKKKELKPVDHAAIDYLPIRKNLYIVPRALAALTSEQVQAARAALEIKIRGKGCPPPVETWEQCGLRDRVLAVITRLGFGAPFAIQRQALPALMSGRDVIGVARTGSGKTLAFLLPLFRHILDQPPLGEGEGPIGLIMAPARELAVQIYTEAKKFTKALGLRVTAVYG 230          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A6H5K7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K3_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 5.010e-85
Identity = 137/196 (69.90%), Postives = 166/196 (84.69%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            M+AGEGD+MEE+ER+KVEQDALQ+LQ+S+KKKELKPVDH  + Y   RKNLYI+PK L+    E+ E  R +++IKVRGKGCPP + +WEQCG  DR+ +V+ +  F  PF IQ+QA+PA+MSGRDVIGVA TGSGKTLAF+LP+LRHI DQ  LGEGEGP+GLI+APARELAVQIYNEAR+FTKALG+RVTAVYG
Sbjct:  484 MFAGEGDIMEEYERDKVEQDALQLLQDSMKKKELKPVDHSKISYINVRKNLYIIPKVLAMASEEKKENDRLELDIKVRGKGCPPVLHSWEQCGFSDRVLAVIRRNNFEKPFAIQKQAMPALMSGRDVIGVASTGSGKTLAFLLPLLRHIFDQPVLGEGEGPIGLIMAPARELAVQIYNEARKFTKALGLRVTAVYG 679          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2MCY9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCY9_9STRA)

HSP 1 Score: 273 bits (697), Expect = 1.040e-81
Identity = 133/202 (65.84%), Postives = 169/202 (83.66%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSL-PPE---EVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            MWA EGDVMEEHER   E++AL++LQE+++KKEL PVDH L++Y P RKN+YI+PKAL+ L  PE   E+  +R D+EIK+RG+GCPPPV+TW  CG+ DR+ + + +     +APF +Q+QA+PAIMSGRD+IG+AKTGSGKTLAF+LPM RHI DQ  LGEGEGP+GLILAPARELAVQIYNEA++FTK+LG+RVTA+YG
Sbjct:  456 MWASEGDVMEEHERNNEEENALEMLQEAMRKKELAPVDHTLVDYIPIRKNMYILPKALAHLLKPENAKELNAKREDLEIKIRGRGCPPPVDTWAHCGISDRVLAQLTRVYGPDSAPFAVQKQAIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQPVLGEGEGPIGLILAPARELAVQIYNEAKKFTKSLGLRVTAIYG 657          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S2WWQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWQ9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 2.960e-77
Identity = 132/202 (65.35%), Postives = 162/202 (80.20%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLP----PEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKC--KFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            ++  +GDVMEEHERE  E+ AL+ LQE+LKKKEL PVDH L++Y   RKNLYIVP+ L+ L      +++   R  +EIKVRG+GCPPPVETW+QCGL DR+   + K   + + PF +Q+QA+PAIMSGRDVIG+AKTGSGKTLAF+LPM+RHI DQ  LGEGEGPVGLI+APARELAVQIY EAR+FTKAL +RVTA+YG
Sbjct:  534 IFGDDGDVMEEHEREDQEKSALETLQEALKKKELAPVDHTLIDYISVRKNLYIVPRVLAPLARLENAKQLAELREKLEIKVRGRGCPPPVETWDQCGLPDRVLKQLRKVLGEDSTPFAVQKQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMIRHILDQPPLGEGEGPVGLIMAPARELAVQIYKEARKFTKALALRVTAIYG 735          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S1TZQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZQ2_9STRA)

HSP 1 Score: 241 bits (614), Expect = 4.230e-73
Identity = 123/199 (61.81%), Postives = 152/199 (76.38%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            ++  EGDVM+E ER K  +DA+  ++   KKKE++PVDH  ++Y PFRKNLYIVP+AL+ L  +EV+ RR  M IKVRG+ CPPPVE W  CGL DR+ S++ +  +  PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ     LGEG GP+GLI+APARELAVQI  EAR+F +A  +RV AVYG
Sbjct:   34 LFESEGDVMDEVERMKQLEDAVLAMEAEAKKKEVRPVDHAAIDYIPFRKNLYIVPRALARLTQKEVQHRRDRMGIKVRGRACPPPVEKWSHCGLSDRLESLLLRHHWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMYRHILDQLAKYPLGEGRGPIGLIMAPARELAVQIAAEARKFARAFDLRVAAVYG 232          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A813BM93_9DINO (Ddx46 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BM93_9DINO)

HSP 1 Score: 228 bits (581), Expect = 1.120e-72
Identity = 109/166 (65.66%), Postives = 131/166 (78.92%), Query Frame = 0
Query:   31 KKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            KK+LKPVDH  +EY P RKN YI  + +++L PEEV+  R ++EI++RGK CP P++ + QCGL DRI  V+ K  + APF IQRQA+PAIMSGRDVI VAKTGSGKTLAF+LPM RH+ DQ  +G GEGPVGLI+APARELA QIY EAR+F K L MRVTAVYG
Sbjct:    3 KKDLKPVDHAQVEYMPIRKNFYIEAREIAALTPEEVQEIRNELEIRIRGKNCPRPIKYFTQCGLSDRILKVLEKLGYEAPFAIQRQAIPAIMSGRDVIAVAKTGSGKTLAFLLPMFRHVLDQPRVGAGEGPVGLIMAPARELAAQIYREARKFAKVLNMRVTAVYG 168          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: W7TCV9_9STRA (Dead-box atp-dependent rna helicase 42-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCV9_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.610e-72
Identity = 126/201 (62.69%), Postives = 155/201 (77.11%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            ++  +GD+ EE E    E  + AL++LQE +KKKELKPVDH  ++Y P RK LYIVP+AL      E+ RRR  +EIKVRGKGCP P+ETWEQ GL DR+  ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ     LGEGEGP+G+++APARELAVQI+ EA++F + LG+R  AVYG
Sbjct:  139 LFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKPVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 339          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7R9U272_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U272_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.900e-71
Identity = 121/199 (60.80%), Postives = 156/199 (78.39%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            ++  EGDVM+E ER++ E++A+  ++   KKKE+KPV+H  ++Y PFRKNLYIVP+AL+ L  +EV+ +R  M IKVRG+ CPPPV+ W QCGL DR+ S++ K  +  PF IQ+QA+PAIMSGRDVIGVAKTGSGKTLAF+LPM RHI DQ     L EGEGP+GLI+APARELAVQI +EAR+F ++  +RV AVYG
Sbjct:  334 LFESEGDVMDEEERKRQEEEAIASIEAEAKKKEVKPVNHDEIDYIPFRKNLYIVPRALARLTQKEVQGKRDKMGIKVRGRACPPPVDKWSQCGLSDRLESLLLKHSWKEPFNIQKQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHILDQVATYPLDEGEGPIGLIMAPARELAVQIASEARKFARSFNLRVAAVYG 532          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A4D9CQL0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQL0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.190e-70
Identity = 125/201 (62.19%), Postives = 154/201 (76.62%), Query Frame = 0
Query:    1 MWAGEGDVMEEHEREKVE--QDALQVLQESLKKKELKPVDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAE---LGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            ++  +GD+ EE E    E  + AL++LQE +KKKELK VDH  ++Y P RK LYIVP+AL      E+ RRR  +EIKVRGKGCP P+ETWEQ GL DR+  ++ K K A PFPIQRQALPAIM+GRD+IGVAKTGSGKTLAF+LPMLRHI DQ     LGEGEGP+G+++APARELAVQI+ EA++F + LG+R  AVYG
Sbjct:  563 LFQSDGDLEEEDEEGPREGPKTALEILQEQVKKKELKAVDHARVDYLPIRKKLYIVPRALHGHSDAELNRRREALEIKVRGKGCPAPLETWEQSGLPDRVLGLLRKYKLAEPFPIQRQALPAIMAGRDIIGVAKTGSGKTLAFLLPMLRHILDQEASFPLGEGEGPIGMVMAPARELAVQIHTEAKKFCRPLGLRCVAVYG 763          
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Match: A0A7S4D7A6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A6_HETAK)

HSP 1 Score: 229 bits (584), Expect = 9.470e-69
Identity = 107/160 (66.88%), Postives = 130/160 (81.25%), Query Frame = 0
Query:   37 VDHILMEYEPFRKNLYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRSVVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIADQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG 196
            V+H  ++Y P RKNL+I+PK L+ L  EEV++ R  ++IK+RGKGCPPPV TWE+CG  +R+  V+ K     PFPIQRQA PAIM GRDVIGVAKTGSGKTLAFVLP+LRHI DQ  LGEGEGP+GLI+APARELA QIY++A++FTK LG+R TAVYG
Sbjct:   82 VNHDEIDYLPIRKNLFILPKKLAKLKAEEVKKIRDGLQIKIRGKGCPPPVATWEECGFSERVLKVIQKLGLKEPFPIQRQAFPAIMGGRDVIGVAKTGSGKTLAFVLPLLRHILDQPPLGEGEGPIGLIMAPARELAFQIYDQAKKFTKMLGLRCTAVYG 241          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQB2_9STRA8.330e-9071.43P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5K7K3_9PHAE5.010e-8569.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MCY9_9STRA1.040e-8165.84Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2WWQ9_9STRA2.960e-7765.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZQ2_9STRA4.230e-7361.81Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A813BM93_9DINO1.120e-7265.66Ddx46 protein (Fragment) n=1 Tax=Symbiodinium sp. ... [more]
W7TCV9_9STRA1.610e-7262.69Dead-box atp-dependent rna helicase 42-like protei... [more]
A0A7R9U272_9STRA4.900e-7160.80Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CQL0_9STRA1.190e-7062.19Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4D7A6_HETAK9.470e-6966.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 111..196
e-value: 1.1E-22
score: 80.6
NoneNo IPR availableGENE3D3.40.50.300coord: 51..196
e-value: 9.7E-43
score: 148.1
NoneNo IPR availablePANTHERPTHR24031:SF25ATP-DEPENDENT RNA HELICASE DDX46-RELATEDcoord: 13..196
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 13..196
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 118..196
score: 14.47
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 87..115
score: 8.33
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:3225355..3228073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2348.1mRNA_S-ischiensis_contig11.2348.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 3225355..3228078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2348.1 ID=prot_S-ischiensis_contig11.2348.1|Name=mRNA_S-ischiensis_contig11.2348.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=196bp
MWAGEGDVMEEHEREKVEQDALQVLQESLKKKELKPVDHILMEYEPFRKN
LYIVPKALSSLPPEEVERRRTDMEIKVRGKGCPPPVETWEQCGLGDRIRS
VVHKCKFAAPFPIQRQALPAIMSGRDVIGVAKTGSGKTLAFVLPMLRHIA
DQAELGEGEGPVGLILAPARELAVQIYNEARRFTKALGMRVTAVYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase