mRNA_S-ischiensis_contig11.2011.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.2011.1 vs. uniprot
Match: R1E7X7_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7X7_EMIHU) HSP 1 Score: 72.8 bits (177), Expect = 1.850e-10 Identity = 43/134 (32.09%), Postives = 57/134 (42.54%), Query Frame = 1
Query: 826 CPVCLNWMDRPVSPPCGHSYCFECINSVVQAALHPPXXXXXXXXXXXXXXXXXRVPFVPTAVMPNTRLQAEMTRARVPCLHEGCGETFYPLEWKMHQEACQSAPVACVHGGVGCGFRGLRRDLPRHLAQACHYE 1227
CPVC N M PV+PPCGHS+C +C Q HP P + ++V P++ + + RV C GCG H AC V C H +GC + R L +HLA C +E
Sbjct: 63 CPVCNNVMVDPVAPPCGHSFCSKC----TQTLEHPEQGGKIECPTCAR-------PALASSVRPSSMMSWLLGGVRVRCTAPGCGHESDRSSAGAHAAACPHVLVECPHASMGCAAKVARGSLAQHLA-GCPFE 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.2011.1 >prot_S-ischiensis_contig11.2011.1 ID=prot_S-ischiensis_contig11.2011.1|Name=mRNA_S-ischiensis_contig11.2011.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=644bp EAAASTRPAGASAWRAQQEAAMGDAAPNRAGQSADGAPEGSGQGVHRPGPback to top mRNA from alignment at S-ischiensis_contig11:428506..434287+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.2011.1 ID=mRNA_S-ischiensis_contig11.2011.1|Name=mRNA_S-ischiensis_contig11.2011.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5782bp|location=Sequence derived from alignment at S-ischiensis_contig11:428506..434287+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:428506..434287+ >mRNA_S-ischiensis_contig11.2011.1 ID=mRNA_S-ischiensis_contig11.2011.1|Name=mRNA_S-ischiensis_contig11.2011.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3864bp|location=Sequence derived from alignment at S-ischiensis_contig11:428506..434287+ (Schizocladia ischiensis KU_0333)back to top |