mRNA_S-ischiensis_contig11.1964.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A6H5JMW3_9PHAE (GTP_cyclohydro2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMW3_9PHAE) HSP 1 Score: 358 bits (919), Expect = 3.070e-119 Identity = 192/292 (65.75%), Postives = 227/292 (77.74%), Query Frame = 3
Query: 249 LYMFGGVIVGPDANKLATV---LEHTDGATSGEDTDEEAPHSPARDAEPGFRSGLKRKAPGCLPGPGRTVRKGDATPRAPDGHAAARAKATGQGCTSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAV-IYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLINSL 1112
L++FGGV VG A T L DG+ ED+ A AR A+ R GLKRK G + DATPRAP+G AAA+AKA GQGCT+FVSEC+LPT+KG FRLR+YRY K+HEPVVMVAG+VRGRE+V VRVHDQCQTSEVLGS+RCDCREQL +SL+++QEHGG V IYL QEGRGIGLANKVAAYALQD GLDTV+ANR+LGF DD+RSYECV+FIL DM +KSV+L+TNNP+K+ WLRA+GV V GR+P+ VP+NEHN YL++KA RMSHLINSL
Sbjct: 43 LHLFGGVFVGKAAEAYWTAILQLRRGDGSCF-EDSQTGAARGDARRADGAIR-GLKRKRAGAMA-------SSDATPRAPEGQAAAQAKAAGQGCTTFVSECSLPTEKGNFRLRAYRYADGVKTHEPVVMVAGNVRGRENVPVRVHDQCQTSEVLGSKRCDCREQLDMSLRYIQEHGGGVVIYLAQEGRGIGLANKVAAYALQDDGLDTVEANRQLGFEDDERSYECVEFILGDMDIKSVQLITNNPFKIGWLRAMGVKVEGRIPIEVPANEHNHGYLEAKASRMSHLINSL 325
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A835ZEW2_9STRA (GTP cyclohydrolase II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW2_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.260e-100 Identity = 170/288 (59.03%), Postives = 208/288 (72.22%), Query Frame = 3
Query: 249 LYMFGGVIVGPDANKLATVLEHTDGATSGEDTDEEAPHSPARDAEPGFRSGLKRKAPGCLPGPGRTVRKGDATPRAPDGHAAARAKATGQGCTSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLINSL 1112
L +FGGV+ G +A KL+++ + E+P++ A D+E +AP R RK + P +A A A G T+FVS C+LPTDKG F LR+YR+ GP +SHEPVVMVAG+ +G E V VRVHDQCQTSEVLGS+RCDC+EQL +L+H+QEHGGAVIYLQQEGRGIGLANKVAAYALQD GLDTVDANR LGF DD+RSYECV +IL DMGVKSVRL+TNNP+K+ LRALGV V VPV+VP++E NERY++SK +RM HLI+ L
Sbjct: 16 LRLFGGVLSGAEAVKLSSLFPKS-----------ESPYTSADDSE------ASSQAP-------RLTRKR----KLPLAQSATAAAACGACATTFVSACSLPTDKGAFTLRAYRHIGPKRSHEPVVMVAGEAKG-EGVFVRVHDQCQTSEVLGSRRCDCKEQLDAALRHIQEHGGAVIYLQQEGRGIGLANKVAAYALQDGGLDTVDANRHLGFADDERSYECVPYILEDMGVKSVRLMTNNPFKVASLRALGVRVLDSVPVVVPTHEDNERYMRSKVERMGHLIDGL 274
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A836CJG3_9STRA (GTP cyclohydrolase II-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG3_9STRA) HSP 1 Score: 308 bits (790), Expect = 1.320e-100 Identity = 172/288 (59.72%), Postives = 201/288 (69.79%), Query Frame = 3
Query: 249 LYMFGGVIVGPDANKLATVLEHTDGATSGEDTDEEAPHSPARDAEPGFRSGLKRKAPGCLPGPGRTVRKGDATPRAPDGHAAARAKATGQGCTSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLINSL 1112
++ FGGV+ G A +L L+H+ ATSG A ++ A R G GR RK A TSFVSECALPT KG+FRLR+YR+ G K HEPVVMVAG+ +G E VHVRVHDQCQTSEVLGSQRCDCREQL SL+H+Q HGGAVIYLQQEGRGIGLANKVAAYALQD GLDTVDANR LGFGDD+RSYECV FIL DMGV SV+L+TNNP+K+D LR LGV V G +P+++P+NEHN +Y++SK RM HLI+SL
Sbjct: 12 VHFFGGVLSGEHAARL---LQHSANATSGSS----AGNTSAEXXXXXXXGAAVRG------GSGRITRKRKAQ-------------------TSFVSECALPTSKGLFRLRAYRHQGR-KRHEPVVMVAGEAKG-EGVHVRVHDQCQTSEVLGSQRCDCREQLDASLKHIQAHGGAVIYLQQEGRGIGLANKVAAYALQDGGLDTVDANRALGFGDDERSYECVPFILEDMGVSSVKLMTNNPFKVDSLRELGVNVLGNIPIVIPTNEHNAKYIQSKVQRMGHLIDSL 265
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A835ZPV4_9STRA (GTP cyclohydrolase II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPV4_9STRA) HSP 1 Score: 276 bits (705), Expect = 9.200e-85 Identity = 133/193 (68.91%), Postives = 158/193 (81.87%), Query Frame = 3
Query: 525 TSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLI 1103
T FVSEC LPT KG FRLR+Y Y GP K EP+ +V+GD+ DV VRVHDQC TSEVLGS RCDCREQL LSL ++ HGG VIY+QQEGRGIGLANK+AAY+LQDQGLDTVDANR LGF DD RSYE V+FILRD+GVKSV+L+TNNP+KL L+A+G+ V R+P+LV N H+ERYL++K+ RMSHL+
Sbjct: 18 TRFVSECKLPTRKGTFRLRAYSYEGPTKGLEPLAIVSGDIGDGVDVPVRVHDQCVTSEVLGSMRCDCREQLELSLDYIHRHGGIVIYMQQEGRGIGLANKIAAYSLQDQGLDTVDANRHLGFEDDYRSYEAVEFILRDLGVKSVQLMTNNPFKLKCLKAMGIKVQARIPMLVAPNPHSERYLQAKSRRMSHLL 210
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A7S2UW32_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW32_9STRA) HSP 1 Score: 265 bits (677), Expect = 2.110e-82 Identity = 133/198 (67.17%), Postives = 157/198 (79.29%), Query Frame = 3
Query: 519 GCTSFVSECALPTDKGMFRLRSYRYTGP-DKSH-EPVVMVAGDVRG---REDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSH 1097
G T V EC+LPT KG+FRLRSYR+ GP + H EPVV++AGD++ +DV VRVHDQC TSEVLGSQRCDC+EQL L+L H+Q HGGA+IYLQQEGRGIGLANKVAAY LQD GLDTVDANR LGF DDQRSYECV FILRD+G+ S+ L+TNNP K+ L LGV VT PVL P N+HN +YL++K ++M H
Sbjct: 66 GQTQVVGECSLPTKKGLFRLRSYRHRGPLEAGHLEPVVVIAGDLQEIYQGKDVAVRVHDQCLTSEVLGSQRCDCKEQLDLALDHIQRHGGALIYLQQEGRGIGLANKVAAYELQDGGLDTVDANRHLGFADDQRSYECVPFILRDLGISSISLMTNNPMKVKSLTRLGVEVTSTTPVLAPPNKHNLQYLRTKVEKMDH 263
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A6H5KNR9_9PHAE (GTP cyclohydrolase II n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNR9_9PHAE) HSP 1 Score: 271 bits (694), Expect = 1.660e-81 Identity = 131/196 (66.84%), Postives = 160/196 (81.63%), Query Frame = 3
Query: 525 TSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLINSL 1112
T +VSEC LPT +G FRLRSYR+ G +S EPVVMVAGD++ E V VRVHDQC TSEVLGS RCDC+EQL L+L ++ EHGG VIY+QQEGRGIGLANKVAAYALQD GLDTVDANR LGF DD RSYE V+ IL DMG+KS++L+TNNP+KL L+++G+ V R+P+LVP N H+ YL++KA RMSH+++ L
Sbjct: 181 TQYVSECLLPTPRGKFRLRSYRHEGHGRSMEPVVMVAGDLQDLEGVPVRVHDQCLTSEVLGSLRCDCKEQLELALDYISEHGGCVIYMQQEGRGIGLANKVAAYALQDGGLDTVDANRHLGFDDDLRSYEAVEHILADMGIKSIKLMTNNPFKLKCLKSMGIKVLSRIPMLVPPNVHSLAYLRAKAHRMSHVLHQL 376
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: L1IM83_GUITC (GTP_cyclohydro2 domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IM83_GUITC) HSP 1 Score: 254 bits (650), Expect = 1.660e-80 Identity = 124/193 (64.25%), Postives = 154/193 (79.79%), Query Frame = 3
Query: 519 GCTSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSH 1097
G T F++EC +PTD+GMFRLRSYRY G K EPVVMV+GD+RG+E V VRVHDQC TSEVLGS+RCDC+EQL ++L ++ ++ GA+IY+ QEGRGIGLANK+AAY LQD GLDTVDANR LGF DD+RSY+CV IL DMG+ SV+L+TNNPYK+ L +GV + P LV N +N +YL++KA RMSH
Sbjct: 1 GKTEFIAECHMPTDRGMFRLRSYRYRGA-KIMEPVVMVSGDLRGKEGVVVRVHDQCFTSEVLGSKRCDCKEQLDMALNYINQNSGAIIYMPQEGRGIGLANKIAAYQLQDNGLDTVDANRHLGFEDDERSYDCVPAILEDMGILSVQLVTNNPYKIQQLTDVGVKIDRTKPSLVEPNTYNVKYLRTKAARMSH 192
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A7S0SVJ9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVJ9_9STRA) HSP 1 Score: 249 bits (635), Expect = 8.490e-78 Identity = 118/200 (59.00%), Postives = 154/200 (77.00%), Query Frame = 3
Query: 504 KATGQGCTSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLI 1103
K T Q T+F++EC +PT G FR+RSY Y+ P+ EP+VM++G+++ +E+V VRVHDQC TSEV GSQRCDC EQL SL+ ++ G VIYLQQEGRGIG+ANKVAAY LQDQGLDT+DAN LGF D+ R Y CV IL D+G+KS+RL+TNNP+K++ L LGV +T R+ V++P +HN RYL SK DRM+H++
Sbjct: 5 KNTNQYSTNFIAECDMPTRLGHFRMRSYTYSSPNTYLEPIVMISGEIKDKENVIVRVHDQCFTSEVFGSQRCDCSEQLQESLKLIKTEDGIVIYLQQEGRGIGIANKVAAYNLQDQGLDTIDANIHLGFKDEMREYYCVPEILNDLGIKSIRLITNNPFKINQLTNLGVNITDRISVVIPPTKHNFRYLSSKRDRMNHML 204
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A3M6VSR5_9STRA (GTP_cyclohydro2 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSR5_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.280e-75 Identity = 118/195 (60.51%), Postives = 152/195 (77.95%), Query Frame = 3
Query: 525 TSFVSECALPTDKGMFRLRSYRYTGPDKSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLINS 1109
T+FV+E ALPTD G+FR+R+YR G + EP+ M+ GDVRG+ +V VRVHDQC TSEV GS +CDC+EQL + +Q+HGG +IY+ QEGRGIGLANK+ AY++Q++GLDTVDANR LGF DD RSYE V IL+D+G+KSVRLLTNNP K+ L LG+TV GR PV++ E ++ YL +KA+RMSHL+ S
Sbjct: 38 TTFVAETALPTDGGVFRVRAYRSVGSLRESEPIAMITGDVRGKHNVFVRVHDQCFTSEVFGSLKCDCKEQLDYAKVCIQQHGGVIIYMPQEGRGIGLANKIMAYSMQERGLDTVDANRVLGFKDDYRSYEPVPTILKDLGIKSVRLLTNNPRKIRLLSQLGITVEGRQPVVIKGGEFSQGYLTAKANRMSHLLPS 232
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Match: A0A7S0U028_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U028_HEMAN) HSP 1 Score: 246 bits (627), Expect = 1.160e-74 Identity = 122/211 (57.82%), Postives = 154/211 (72.99%), Query Frame = 3
Query: 510 TGQGCTSFVSECALPTDKGMFRLRSYRYTGPD------------KSHEPVVMVAGDVRGREDVHVRVHDQCQTSEVLGSQRCDCREQLALSLQHVQEHGGAVIYLQQEGRGIGLANKVAAYALQDQGLDTVDANRRLGFGDDQRSYECVDFILRDMGVKSVRLLTNNPYKLDWLRALGVTVTGRVPVLVPSNEHNERYLKSKADRMSHLIN 1106
T + T FV+EC LPTD+G+FRL SYRY G EPVV+V GD +G+ VRVHDQC TSEVLGS+RCDC+EQL ++LQH+ E+ GA+IY+ QEGRGIGLANK+AAY LQD G+DTVDANR LGF DD+RSY CV FIL MGV+SVRL+TNNP+K++ L LGV + P V N +NE+YL++K +RM+HL++
Sbjct: 124 TAEARTEFVAECKLPTDRGLFRLLSYRYRGAKLVVRNGERVLEWSEMEPVVVVNGDPKGKSGFVVRVHDQCFTSEVLGSKRCDCKEQLDMALQHIIENEGALIYMPQEGRGIGLANKIAAYELQDDGMDTVDANRHLGFDDDERSYRCVPFILDHMGVESVRLITNNPFKIEELSGLGVRIDSVQPSFVEPNAYNEKYLRTKVERMAHLLS 334 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.1964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig11.1964.1 >prot_S-ischiensis_contig11.1964.1 ID=prot_S-ischiensis_contig11.1964.1|Name=mRNA_S-ischiensis_contig11.1964.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=327bp MCHATTDESMGHACIADSEGSPAGERAEAKQPAGTRRALYMFGGVIVGPDback to top mRNA from alignment at S-ischiensis_contig11:81068..83989- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig11.1964.1 ID=mRNA_S-ischiensis_contig11.1964.1|Name=mRNA_S-ischiensis_contig11.1964.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2922bp|location=Sequence derived from alignment at S-ischiensis_contig11:81068..83989- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig11:81068..83989- >mRNA_S-ischiensis_contig11.1964.1 ID=mRNA_S-ischiensis_contig11.1964.1|Name=mRNA_S-ischiensis_contig11.1964.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1962bp|location=Sequence derived from alignment at S-ischiensis_contig11:81068..83989- (Schizocladia ischiensis KU_0333)back to top |