mRNA_S-ischiensis_contig102.1757.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig102.1757.1
Unique NamemRNA_S-ischiensis_contig102.1757.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.070e-75
Identity = 122/225 (54.22%), Postives = 152/225 (67.56%), Query Frame = 3
Query:  219 LYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLG-GREACGCNSNVRLYKYAPGQRFGRHVDESVEDDT-GALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVG-LRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
            +YQD IF I+  LT  EC AW+ +GE  GFE T+H AT EIAHRDNGR+ + SP++AAA+W R++PFVP  L  GR+A GCN+N+RLY+Y  GQRFG+H+DESV D T GA S++T+L+YLNG G                               S  R + G L GGET+FYKG+YGG++A S  P+ G+CLVHGHGARCLLHEGA V  G KYLLRTDVMY+
Sbjct:    1 VYQDLIFRIDGFLTPAECGAWIDWGEETGFENTFHTATREIAHRDNGRLQVHSPDIAAAIWQRIQPFVPAELSRGRKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNGAG-------------------------------SPVRGEEGPLAGGETLFYKGSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMYK 194          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.110e-74
Identity = 128/213 (60.09%), Postives = 153/213 (71.83%), Query Frame = 3
Query:  243 IEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            I+ +L+  ECAAW+ YGE +GFER++H  T+E+AHRDNGRITL S +VAAA++AR+  FVP  +GGR    CNSN+R+Y+YA GQRFG+H+DESV+D+ G  SQWTVL+YLNG         XXXXXXX       XXX        A      LRGGETVFYKGNYG +VA SF P +GACLVHGHG +CLLHEGA V  G KYLLRTDVMY
Sbjct:   23 IDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXKKKGRSDXXXAFA----GAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 231          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 3.660e-70
Identity = 151/351 (43.02%), Postives = 184/351 (52.42%), Query Frame = 3
Query:   60 MGKKGTSSRGGRTGTGNAQGEAALPGSRVCGPAVLPPTRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYK-----------------------------------------------------------------------------GNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            MGKKG  +     GT + +    L  +RV GP VLP  +    +  L+L   R+YQDTI  I+ +L+  ECAAW+ YGE +GFER++H  T+E+AHRDNGRITL S +VAAA++AR+  FVP  +GGR    CNSN+R+Y+YA GQRFG+H+DESV+D+ G  SQWTVL+YLNG         XXXXXXX        XXX     G        LRGGETVFYK                                                                             GNYG +VA SF P +GACLVHGHG +CLLHEGA V  G KYLLRTDVMY
Sbjct:    1 MGKKGKRTT---DGTEDPRRSETLRHTRVYGPLVLPDGKGENDAVDLELTSKRIYQDTILSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXSKKKGRSDXXXTFAGAGEEGAP---LRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 345          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.370e-67
Identity = 116/239 (48.54%), Postives = 147/239 (61.51%), Query Frame = 3
Query:  171 TRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNG--QGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            ++  +K  +L L+   +Y+D IF I +  T  EC AW+ +GE  GFE  +H AT E AHRDNGR+  +S  VA  LW RL  FVP  +GG+EA GC++N+RLYKY PGQRFG+H+D S  D  G  S +TVLVYL+G    G  S A                        G     Q  L+GG TVFY+G+YG +VA S  PL+G+CL+HGHG RCL+HEGA V RG KY+LRTDVMY
Sbjct:   79 SKNNQKMVSLSLRTEGIYRDLIFGIPNFFTPQECRAWIRFGENNGFELQFHNATQEYAHRDNGRLQWESEAVAGVLWERLRAFVPTHMGGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYLSGGEDQGRPSPAEEEAKGGAPLD-------------GLEESLQEPLQGGHTVFYRGSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMY 304          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA)

HSP 1 Score: 212 bits (539), Expect = 1.050e-62
Identity = 110/245 (44.90%), Postives = 145/245 (59.18%), Query Frame = 3
Query:  153 PAVLPPTRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQV--GLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            P ++P  R   K   L++    LY+DTI+ + + L+  ECAAW+ +GE  GFE ++     E AHRDNGRI+++S  +A A + RL P +P   G R+   CN+N+RLYKY PGQRFGRHVDESV D  G  S +TVLVYLNG   + ++ T                     R G  A  +    L GGET FY+ ++G  +A +  P +G  L+HGHGA+CL HEGA V  G KYLLRTDVMY
Sbjct:   30 PPLIPEPRGYSKPVQLNMDKEYLYKDTIYTLTNFLSDSECAAWIEFGEREGFEASFQKQNRECAHRDNGRISIESESIAQAFFLRLNPSLPEKYGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGHNEDNTSETP--------------------RSGDGADLEAINTLVGGETKFYRRHHGSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMY 254          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2ZAS2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAS2_9RHOD)

HSP 1 Score: 201 bits (511), Expect = 1.770e-58
Identity = 99/221 (44.80%), Postives = 131/221 (59.28%), Query Frame = 3
Query:  222 YQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
            YQD I  +ED  T  EC AW+ YGE  G    +H A+A++AHRDNGRI   S E+AA ++ R++  +P         GC+SN+RLY+Y  GQRFG+HVDES + + G  S +T+L+YLN +G                                       LRGGETVFYKGNYG ++ALS+ P  G+ L+HGHG+RC++HEG  V+ G KY+LRTDVMYR
Sbjct:   74 YQDLIHVVEDFFTERECTAWIEYGERYGSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLNHEG---------------------------------------LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMYR 255          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A813GA74_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GA74_POLGL)

HSP 1 Score: 182 bits (463), Expect = 3.320e-51
Identity = 94/219 (42.92%), Postives = 126/219 (57.53%), Query Frame = 3
Query:  234 IFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLG--GREACGCNSNVRLYKYAPGQRFGRHVDESVEDDT-GALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            I  I++ LT  EC  W+++GE +GFE       +  AHRDNGRI  D PEVA+ +W R++PFVP  +G   R+A GC+  +R+Y+Y  GQRFG+HVD S E+ + G  + +TVL+YLNG                                G      + ++GGETVF+K + G + AL FPP RG CL HGHG  C+ HEGA V  G KY+LRTDV+Y
Sbjct:   81 ISAIDNFLTEEECRGWISWGERKGFEEAKQKQNSVFAHRDNGRIEFDGPEVASQIWLRMKPFVPETVGCPPRKALGCSPRIRVYRYTRGQRFGQHVDGSREEPSMGGSTHFTVLIYLNG--------------------------------GDREEKDLQVKGGETVFWKDHDGKKPALVFPPTRGVCLFHGHGDDCMTHEGAGVEDGVKYVLRTDVVY 267          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A2R5GIH8_9STRA (Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH8_9STRA)

HSP 1 Score: 188 bits (478), Expect = 1.350e-50
Identity = 102/228 (44.74%), Postives = 132/228 (57.89%), Query Frame = 3
Query:  198 LDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDES-VEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVM 878
            LDL+   + +D IF +   L+  ECAAW+A+GE RGF     A++A  A RDNGRI++  PEVAA ++ RL   VP  + GR+A GC+ N+RLY+YA GQRFG+H+DES  E D  A S++T+L YLN +G                                       L GGETVFY GN G + AL  PP +G  L+H HG RCL+HEGA V  G KYLLR+DV+
Sbjct:  107 LDLERFAVLRDLIFAVPRCLSPEECAAWIAWGEKRGFASAKQASSAGFAFRDNGRISVHDPEVAAIIFQRLRGVVPAEIDGRKAVGCSPNIRLYRYATGQRFGKHIDESNFEQDLDAWSEFTLLFYLNDEG---------------------------------------LDGGETVFYSGNTGTKEALRVPPAQGLALLHWHGDRCLVHEGANVRAGVKYLLRSDVL 295          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: R1DNF6_EMIHU (P4Hc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNF6_EMIHU)

HSP 1 Score: 175 bits (443), Expect = 6.460e-49
Identity = 94/219 (42.92%), Postives = 122/219 (55.71%), Query Frame = 3
Query:  231 TIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPR--VLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
            ++  I   L+  ECAAWV++GE  GFE+  HA T  IAHRDNGR+ + S  +AAALW+RL P +P      G  ACGCN N+RLY+Y PGQRFG+HVD+S     G  ++WT+LVYL+G  G                                      + GGET FY G   GR ++   PL G+ L+H HG RCL HE   V RG KY+LR+DV++
Sbjct:   13 SMLSIPAFLSPAECAAWVSWGETSGFEQEKHAQTRWIAHRDNGRLAVQSESIAAALWSRLAPLMPAESTRRGAVACGCNPNIRLYRYTPGQRFGQHVDQSNALPGGEQTEWTMLVYLSGGPGQE------------------------------------VVGGETAFYDG---GRRSVVVDPLAGSALLHAHGERCLTHEALEVRRGVKYVLRSDVVF 192          
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2Z9G1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9G1_9RHOD)

HSP 1 Score: 170 bits (431), Expect = 6.830e-48
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 3
Query:  303 GFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
            G    +H A+A++AHRDNGRI   S E+AA ++ R++  +P         GC+SN+RLY+Y  GQRFG+HVDES + + G  S +T+L+YLN +G                                       LRGGETVFYKGNYG ++ALS+ P  G+ L+HGHG+RC++HEG  V+ G KY+LRTDVMYR
Sbjct:    5 GSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLNHEG---------------------------------------LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMYR 159          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHZ3_9STRA1.070e-7554.22Fe2OG dioxygenase domain-containing protein (Fragm... [more]
A0A6H5KGN2_9PHAE2.110e-7460.09P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FQ80_ECTSI3.660e-7043.02P4Hc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S2UX31_9STRA4.370e-6748.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0L0G5Z2_9EUKA1.050e-6244.90Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2ZAS2_9RHOD1.770e-5844.80Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A813GA74_POLGL3.320e-5142.92Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A2R5GIH8_9STRA1.350e-5044.74Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fe... [more]
R1DNF6_EMIHU6.460e-4942.92P4Hc domain-containing protein n=2 Tax=Emiliania h... [more]
A0A7S2Z9G1_9RHOD6.830e-4843.81Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig102contigS-ischiensis_contig102:199372..202726 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score234.2
Seed ortholog evalue7.4e-59
Seed eggNOG ortholog2880.D7FQ80
EggNOG free text desc.Prolyl 4-hydroxylase alpha subunit homologues.
EggNOG OGs28IQ0@1,2QR14@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProlyl 4-hydroxylase, alpha subunit
Ec32 orthologEc-01_007120.1
Exons6
Model size1280
Cds size828
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig102.1757.1prot_S-ischiensis_contig102.1757.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig102 199765..202667 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815554.8689032-UTR-S-ischiensis_contig102:199371..1997641622815554.8689032-UTR-S-ischiensis_contig102:199371..199764Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 199372..199764 -
1695739766.585033-UTR-S-ischiensis_contig102:199371..1997641695739766.585033-UTR-S-ischiensis_contig102:199371..199764Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 199372..199764 -
1622815554.9593477-UTR-S-ischiensis_contig102:202667..2027261622815554.9593477-UTR-S-ischiensis_contig102:202667..202726Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 202668..202726 -
1695739766.6559942-UTR-S-ischiensis_contig102:202667..2027261695739766.6559942-UTR-S-ischiensis_contig102:202667..202726Schizocladia ischiensis KU_0333UTRS-ischiensis_contig102 202668..202726 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815554.8840458-CDS-S-ischiensis_contig102:199764..1999171622815554.8840458-CDS-S-ischiensis_contig102:199764..199917Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 199765..199917 -
1695739766.599153-CDS-S-ischiensis_contig102:199764..1999171695739766.599153-CDS-S-ischiensis_contig102:199764..199917Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 199765..199917 -
1622815554.8966174-CDS-S-ischiensis_contig102:200478..2005091622815554.8966174-CDS-S-ischiensis_contig102:200478..200509Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 200479..200509 -
1695739766.6075735-CDS-S-ischiensis_contig102:200478..2005091695739766.6075735-CDS-S-ischiensis_contig102:200478..200509Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 200479..200509 -
1622815554.9083514-CDS-S-ischiensis_contig102:200609..2007701622815554.9083514-CDS-S-ischiensis_contig102:200609..200770Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 200610..200770 -
1695739766.615691-CDS-S-ischiensis_contig102:200609..2007701695739766.615691-CDS-S-ischiensis_contig102:200609..200770Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 200610..200770 -
1622815554.9250057-CDS-S-ischiensis_contig102:201650..2017651622815554.9250057-CDS-S-ischiensis_contig102:201650..201765Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 201651..201765 -
1695739766.6237159-CDS-S-ischiensis_contig102:201650..2017651695739766.6237159-CDS-S-ischiensis_contig102:201650..201765Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 201651..201765 -
1622815554.938189-CDS-S-ischiensis_contig102:202170..2023561622815554.938189-CDS-S-ischiensis_contig102:202170..202356Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 202171..202356 -
1695739766.6324995-CDS-S-ischiensis_contig102:202170..2023561695739766.6324995-CDS-S-ischiensis_contig102:202170..202356Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 202171..202356 -
1622815554.9483855-CDS-S-ischiensis_contig102:202485..2026671622815554.9483855-CDS-S-ischiensis_contig102:202485..202667Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 202486..202667 -
1695739766.646642-CDS-S-ischiensis_contig102:202485..2026671695739766.646642-CDS-S-ischiensis_contig102:202485..202667Schizocladia ischiensis KU_0333CDSS-ischiensis_contig102 202486..202667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig102.1757.1

>prot_S-ischiensis_contig102.1757.1 ID=prot_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=276bp
MGKKGTSSRGGRTGTGNAQGEAALPGSRVCGPAVLPPTRQRKKSQALDLQ
PVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNG
RITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGR
HVDESVEDDTGALSQWTVLVYLNGQGGNASAATASASSSTGGSKIPGPGG
TGPGRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGA
RCLLHEGAPVLRGTKYLLRTDVMYR*
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mRNA from alignment at S-ischiensis_contig102:199372..202726-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig102.1757.1 ID=mRNA_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3355bp|location=Sequence derived from alignment at S-ischiensis_contig102:199372..202726- (Schizocladia ischiensis KU_0333)
GGTGACCCGCACGATACATCAGGAATTGTCAATCGCGAAGGTGCACCTCC AGCAATAACATGGGCAAAAAGGGGACAAGCTCGCGGGGGGGGCGAACTGG TACCGGCAATGCGCAAGGGGAGGCTGCATTGCCCGGCAGCCGAGTCTGTG GGCCGGCAGTTCTTCCGCCAACCCGACAGCGAAAGAAGAGCCAGGCGCTG GACCTCCAACCCGTGCGGCTCTACCAGGACACCATATTCTGGCGAGTTAC AACAAGTCGCCTACCTCGGACGCGTCTTGTGCCAGGTAGTGAACATTGCC GCAAATCTCTCTAATGTGTTTTAGTGGCGATCCCCTAACGTCCCCGCCCC AACCCACTTACGAACGCCAGCATCGAGGACATTTTGACCGCTGGCGAGTG TGCTGCTTGGGTGGCCTACGGGGAGGCCCGCGGGTTCGAGCGCACGTATC ACGCCGCCACCGCCGAAATAGCTCACCGAGACAATGGACGCATCACCCTG GACAGCCCCGAGGTTGCGGCCGCGCTATGGGCCCGCCTGGAGCCATTTGT GCCCAGGTAAGTGAAGCCGGTGCGCTTTCAACTCCCTGTGCTTGGCCATT ATCGATACATCGATAGTCCGTGTTGGTATTCGAGGCTGATCGATATATAT ATCAAACGAAATAAGTCCATATATCGGTGTAACATTTTGACACGACCACC TGTTTCGTATGTGGCGCCCTTTTGGGCCCTTAGAGGAAATTAGGGGCAAT TAGGCCTGAACTGAAGGCTAGGCCCTAATCAACCTCTAATGCCAACCCTG CTTGCGAGCAGGGTGCTGGGGGGCAGGGAGGCGTGCGGGTGTAACTCCAA CTTCCGCCTATACATGTATATATAGTTAGAGTTAAGTACGGGTACTTAGA CCTAAATGAAGGCTGATGAGGCCCGAATTCACCGCTAAGTGCCAACCCTG CTTGTGACCAGGGTGCTGGGGGGCAGGGAGGCGTGCGGGTGTAACTCCAA CGTCCGGCTCTACAAGTACGCCCCCGGGCAGCGCTTCGGCCGGCACGTAG ACGAGAGCGTGGAAGACGACACGGGGGTAAGTTTTTTTTTTGCGATGTGA TGGTTAAACTAGGTACACTGAGTTCGACTACTAGTAGGCACCTGTGTCGT TGCATCATGTCACATCACATACACGTCGGTGTAAGGTTTTTATGCGATGT GATGGTCAAACTAGGTCAGTGAGTTAGACTAAGCACCTGTGCCGTCGCAT CACATCACATCACATACACGCCGTGTCAGAGACACATAGCTTAGCGGCGA TTTGACACGGGTGCGAGTCCTCTATAGGCACTTATCGGAGGAGTGTTGGT GCGCTGTGTACTTGAAAGTAGTTTATATTTGACCGTTCTGCGGCGATGAA TTAGTTAGCACGCCGTATAGTTCATGCTTCGAAATACGTACTCTAGTGTA CTACCTGTACTGTGATCTCAACTCTAGAAAACAACCTCGGCTTCTCGGAC GAGACTGACCTCGACAGCGGTAGTGATGTGATGTGATGCGATGTGTACTC TAATCTTCAGTAGTTTGACATCACATCACGCGTCAATCCACGTCACACCA GGGAAACTGAAATCGAGCGAGGCGCAGTCCATGTCACTGGACGAGCCCCA GCAGTGGGCCGTCCGTCCGTTCGTCGCAAAGCACAAGGCAAATCGGAGGG GGGCGGGGGGGGGGGGGGGGGGGAGGAGGAGGAGGAGGGGTACTCGTACG AGAGACTCGTTACATACGGGAGAATGTCAATCAACAGTCGAATCCATACA CTTCCGCATGCCCACGACTCCTGACACAAGAGACTGTCAATAAACAGACG AAATCCATACACTTCCGTGCGCCCGAAAACTTCCCCCGAGAATGTCAATC AACAGACGAATCCATACACTTCCATACCCCCACAACCTTCCCAGCCCCCC AACAAGGCCCTCAGCCAATGGACCGTCCTCGTTTATCTCAACGGCCAAGG CGGCAACGCCTCCGCCGCCACCGCCTCCGCCTCCTCCTCCACCGGCGGGT CCAAGATTCCCGGGCCCGGGGGCACCGGGCCTGGAAGACGAGGTTCAGCT GCCCGGGCCCAGGTTGGGTCTGCCCCGGGCCCGGGGGGCAGGAGCGGGGG GCCCTCCAGGAGGGGCGGGCGGTGGGGATGGGGAGGCGTTGGCGGAGGCG GCCGGGGAGGAGGAAAGCCTCCGGGGGGGCGAGACAGTTTTTTACAAGGT TCGTTTGTTACCACGCTGGCTGTACTAGCCGGGGTTGGCACTTGGAGGTC AATTAGGGCCTGGTTCGCCTTCATTTTAGGTCTAAGTCCCCCTAATTACC TCTAGTTAAGGGTCAAAGTGCCAACCCTGGTACTCGCTGGCATCTCATTG CTTTGGCCGGTGGGCCTTCTCCCTATTGTAGGCCTTCGTTGGCCGCAGCC GCCCCTTTCTTGCAAAAATCCCTTTCTTGCCTCCCTCTCTCACGAGTCCG CTTCCGAGGGCGGTCCTCGCTGCCCCCTCCTCTCCATTGGCACTGCCCTG CTCTGTCCACCCTCATTGGCCGCTTCCCCCCTCACGCCCCGGACTCAGCG TCCAGTCCCCCACTAATCTGGTTACCTGATTCGAAGGGTAATAGTAGTAT ACCATGTAGTAGTACTGTAGTAGTATTAACAGGAACAACACAGGGCGAGG TGCAGGCCACGTCACTAAAGACCTCAACAGTGGCCCTTCCTTGTAGCGCA TGTATTGCACCTACATGCTAACCATATACCCTCCCGCCCGACCGTCGGCC GGCCGGCAGGGCAACTACGGCGGCCGGGTGGCGCTGTCCTTCCCCCCGCT AAGGGGGGCGTGCCTGGTGCACGGCCACGGCGCCCGCTGCCTGCTGCACG AGGGCGCCCCGGTGCTCCGGGGGACCAAGTACCTGCTGCGTACGGATGTC ATGTACCGCTGACTACCACAGTACAAAGTACTTCGAAGTACATGTTATTC TCCTTTTAAGCAACAGAACGTAAAGAAAAACAAACAAGAGATGCAGAGTT GTTTTTAGTACACTCTTCACCGGTGCTCCGGGGGACCAAGGACCTGCTGC GCACGGATGTCATGTACCGCTGACTACCACAGTACAAAGTAGGTACTTCG AAGTACATATTATTCTCCTTTTAAACAGCAGAACATACAGAAAAACAAAC AAGAGATGGTTGTTTTTAGTACACTCTTCACCGGTGCTCCGGGGGACCAA GTACTTCGAAGTACCTGCTGCGCATGGATGTCATTTGCCGCTGACTACTA CAGGACATACTTCGAGTATTGTTCTCCTTTTAAACCGCAGAACATAAAGA AAAAC
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Coding sequence (CDS) from alignment at S-ischiensis_contig102:199372..202726-

>mRNA_S-ischiensis_contig102.1757.1 ID=mRNA_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1656bp|location=Sequence derived from alignment at S-ischiensis_contig102:199372..202726- (Schizocladia ischiensis KU_0333)
ATGGGCAAAAAGGGGACAAGCTCGCGGGGGGGGCGAACTGGTACCGGCAA
TGCGCAAGGGGAGGCTGCATTGCCCGGCAGCCGAGTCTGTGGGCCGGCAG
TTCTTCCGCCAACCCGACAGCGAAAGAAGAGCCAGGCGCTGGACCTCCAA
CCCGTGCGGCTCTACCAGGACACCATATTCTGATGGGCAAAAAGGGGACA
AGCTCGCGGGGGGGGCGAACTGGTACCGGCAATGCGCAAGGGGAGGCTGC
ATTGCCCGGCAGCCGAGTCTGTGGGCCGGCAGTTCTTCCGCCAACCCGAC
AGCGAAAGAAGAGCCAGGCGCTGGACCTCCAACCCGTGCGGCTCTACCAG
GACACCATATTCTGCATCGAGGACATTTTGACCGCTGGCGAGTGTGCTGC
TTGGGTGGCCTACGGGGAGGCCCGCGGGTTCGAGCGCACGTATCACGCCG
CCACCGCCGAAATAGCTCACCGAGACAATGGACGCATCACCCTGGACAGC
CCCGAGGTTGCGGCCGCGCTATGGGCCCGCCTGGAGCCATTTGTGCCCAG
CATCGAGGACATTTTGACCGCTGGCGAGTGTGCTGCTTGGGTGGCCTACG
GGGAGGCCCGCGGGTTCGAGCGCACGTATCACGCCGCCACCGCCGAAATA
GCTCACCGAGACAATGGACGCATCACCCTGGACAGCCCCGAGGTTGCGGC
CGCGCTATGGGCCCGCCTGGAGCCATTTGTGCCCAGGGTGCTGGGGGGCA
GGGAGGCGTGCGGGTGTAACTCCAACGTCCGGCTCTACAAGTACGCCCCC
GGGCAGCGCTTCGGCCGGCACGTAGACGAGAGCGTGGAAGACGACACGGG
GGGTGCTGGGGGGCAGGGAGGCGTGCGGGTGTAACTCCAACGTCCGGCTC
TACAAGTACGCCCCCGGGCAGCGCTTCGGCCGGCACGTAGACGAGAGCGT
GGAAGACGACACGGGGGCCCTCAGCCAATGGACCGTCCTCGTTTATCTCA
ACGGCCAAGGCGGCAACGCCTCCGCCGCCACCGCCTCCGCCTCCTCCTCC
ACCGGCGGGTCCAAGATTCCCGGGCCCGGGGGCACCGGGCCTGGAAGACG
AGGTTCAGCTGCCCGGGCCCAGGTTGGGCCCTCAGCCAATGGACCGTCCT
CGTTTATCTCAACGGCCAAGGCGGCAACGCCTCCGCCGCCACCGCCTCCG
CCTCCTCCTCCACCGGCGGGTCCAAGATTCCCGGGCCCGGGGGCACCGGG
CCTGGAAGACGAGGTTCAGCTGCCCGGGCCCAGGTTGGCCTCCGGGGGGG
CGAGACAGTTTTTTACAAGCCTCCGGGGGGGCGAGACAGTTTTTTACAAG
GGCAACTACGGCGGCCGGGTGGCGCTGTCCTTCCCCCCGCTAAGGGGGGC
GTGCCTGGTGCACGGCCACGGCGCCCGCTGCCTGCTGCACGAGGGCGCCC
CGGTGCTCCGGGGGACCAAGTACCTGCTGCGTACGGATGTCATGTACCGC
TGAGGCAACTACGGCGGCCGGGTGGCGCTGTCCTTCCCCCCGCTAAGGGG
GGCGTGCCTGGTGCACGGCCACGGCGCCCGCTGCCTGCTGCACGAGGGCG
CCCCGGTGCTCCGGGGGACCAAGTACCTGCTGCGTACGGATGTCATGTAC
CGCTGA
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