mRNA_S-ischiensis_contig102.1757.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.070e-75 Identity = 122/225 (54.22%), Postives = 152/225 (67.56%), Query Frame = 3
Query: 219 LYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLG-GREACGCNSNVRLYKYAPGQRFGRHVDESVEDDT-GALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVG-LRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
+YQD IF I+ LT EC AW+ +GE GFE T+H AT EIAHRDNGR+ + SP++AAA+W R++PFVP L GR+A GCN+N+RLY+Y GQRFG+H+DESV D T GA S++T+L+YLNG G S R + G L GGET+FYKG+YGG++A S P+ G+CLVHGHGARCLLHEGA V G KYLLRTDVMY+
Sbjct: 1 VYQDLIFRIDGFLTPAECGAWIDWGEETGFENTFHTATREIAHRDNGRLQVHSPDIAAAIWQRIQPFVPAELSRGRKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNGAG-------------------------------SPVRGEEGPLAGGETLFYKGSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMYK 194
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE) HSP 1 Score: 241 bits (615), Expect = 2.110e-74 Identity = 128/213 (60.09%), Postives = 153/213 (71.83%), Query Frame = 3
Query: 243 IEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
I+ +L+ ECAAW+ YGE +GFER++H T+E+AHRDNGRITL S +VAAA++AR+ FVP +GGR CNSN+R+Y+YA GQRFG+H+DESV+D+ G SQWTVL+YLNG XXXXXXX XXX A LRGGETVFYKGNYG +VA SF P +GACLVHGHG +CLLHEGA V G KYLLRTDVMY
Sbjct: 23 IDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXKKKGRSDXXXAFA----GAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 231
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI) HSP 1 Score: 234 bits (597), Expect = 3.660e-70 Identity = 151/351 (43.02%), Postives = 184/351 (52.42%), Query Frame = 3
Query: 60 MGKKGTSSRGGRTGTGNAQGEAALPGSRVCGPAVLPPTRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYK-----------------------------------------------------------------------------GNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
MGKKG + GT + + L +RV GP VLP + + L+L R+YQDTI I+ +L+ ECAAW+ YGE +GFER++H T+E+AHRDNGRITL S +VAAA++AR+ FVP +GGR CNSN+R+Y+YA GQRFG+H+DESV+D+ G SQWTVL+YLNG XXXXXXX XXX G LRGGETVFYK GNYG +VA SF P +GACLVHGHG +CLLHEGA V G KYLLRTDVMY
Sbjct: 1 MGKKGKRTT---DGTEDPRRSETLRHTRVYGPLVLPDGKGENDAVDLELTSKRIYQDTILSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXSKKKGRSDXXXTFAGAGEEGAP---LRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 345
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA) HSP 1 Score: 225 bits (573), Expect = 4.370e-67 Identity = 116/239 (48.54%), Postives = 147/239 (61.51%), Query Frame = 3
Query: 171 TRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNG--QGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
++ +K +L L+ +Y+D IF I + T EC AW+ +GE GFE +H AT E AHRDNGR+ +S VA LW RL FVP +GG+EA GC++N+RLYKY PGQRFG+H+D S D G S +TVLVYL+G G S A G Q L+GG TVFY+G+YG +VA S PL+G+CL+HGHG RCL+HEGA V RG KY+LRTDVMY
Sbjct: 79 SKNNQKMVSLSLRTEGIYRDLIFGIPNFFTPQECRAWIRFGENNGFELQFHNATQEYAHRDNGRLQWESEAVAGVLWERLRAFVPTHMGGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYLSGGEDQGRPSPAEEEAKGGAPLD-------------GLEESLQEPLQGGHTVFYRGSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMY 304
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA) HSP 1 Score: 212 bits (539), Expect = 1.050e-62 Identity = 110/245 (44.90%), Postives = 145/245 (59.18%), Query Frame = 3
Query: 153 PAVLPPTRQRKKSQALDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQV--GLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
P ++P R K L++ LY+DTI+ + + L+ ECAAW+ +GE GFE ++ E AHRDNGRI+++S +A A + RL P +P G R+ CN+N+RLYKY PGQRFGRHVDESV D G S +TVLVYLNG + ++ T R G A + L GGET FY+ ++G +A + P +G L+HGHGA+CL HEGA V G KYLLRTDVMY
Sbjct: 30 PPLIPEPRGYSKPVQLNMDKEYLYKDTIYTLTNFLSDSECAAWIEFGEREGFEASFQKQNRECAHRDNGRISIESESIAQAFFLRLNPSLPEKYGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGHNEDNTSETP--------------------RSGDGADLEAINTLVGGETKFYRRHHGSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMY 254
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2ZAS2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAS2_9RHOD) HSP 1 Score: 201 bits (511), Expect = 1.770e-58 Identity = 99/221 (44.80%), Postives = 131/221 (59.28%), Query Frame = 3
Query: 222 YQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
YQD I +ED T EC AW+ YGE G +H A+A++AHRDNGRI S E+AA ++ R++ +P GC+SN+RLY+Y GQRFG+HVDES + + G S +T+L+YLN +G LRGGETVFYKGNYG ++ALS+ P G+ L+HGHG+RC++HEG V+ G KY+LRTDVMYR
Sbjct: 74 YQDLIHVVEDFFTERECTAWIEYGERYGSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLNHEG---------------------------------------LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMYR 255
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A813GA74_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GA74_POLGL) HSP 1 Score: 182 bits (463), Expect = 3.320e-51 Identity = 94/219 (42.92%), Postives = 126/219 (57.53%), Query Frame = 3
Query: 234 IFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLG--GREACGCNSNVRLYKYAPGQRFGRHVDESVEDDT-GALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
I I++ LT EC W+++GE +GFE + AHRDNGRI D PEVA+ +W R++PFVP +G R+A GC+ +R+Y+Y GQRFG+HVD S E+ + G + +TVL+YLNG G + ++GGETVF+K + G + AL FPP RG CL HGHG C+ HEGA V G KY+LRTDV+Y
Sbjct: 81 ISAIDNFLTEEECRGWISWGERKGFEEAKQKQNSVFAHRDNGRIEFDGPEVASQIWLRMKPFVPETVGCPPRKALGCSPRIRVYRYTRGQRFGQHVDGSREEPSMGGSTHFTVLIYLNG--------------------------------GDREEKDLQVKGGETVFWKDHDGKKPALVFPPTRGVCLFHGHGDDCMTHEGAGVEDGVKYVLRTDVVY 267
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A2R5GIH8_9STRA (Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH8_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.350e-50 Identity = 102/228 (44.74%), Postives = 132/228 (57.89%), Query Frame = 3
Query: 198 LDLQPVRLYQDTIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDES-VEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVM 878
LDL+ + +D IF + L+ ECAAW+A+GE RGF A++A A RDNGRI++ PEVAA ++ RL VP + GR+A GC+ N+RLY+YA GQRFG+H+DES E D A S++T+L YLN +G L GGETVFY GN G + AL PP +G L+H HG RCL+HEGA V G KYLLR+DV+
Sbjct: 107 LDLERFAVLRDLIFAVPRCLSPEECAAWIAWGEKRGFASAKQASSAGFAFRDNGRISVHDPEVAAIIFQRLRGVVPAEIDGRKAVGCSPNIRLYRYATGQRFGKHIDESNFEQDLDAWSEFTLLFYLNDEG---------------------------------------LDGGETVFYSGNTGTKEALRVPPAQGLALLHWHGDRCLVHEGANVRAGVKYLLRSDVL 295
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: R1DNF6_EMIHU (P4Hc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNF6_EMIHU) HSP 1 Score: 175 bits (443), Expect = 6.460e-49 Identity = 94/219 (42.92%), Postives = 122/219 (55.71%), Query Frame = 3
Query: 231 TIFCIEDILTAGECAAWVAYGEARGFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPR--VLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMY 881
++ I L+ ECAAWV++GE GFE+ HA T IAHRDNGR+ + S +AAALW+RL P +P G ACGCN N+RLY+Y PGQRFG+HVD+S G ++WT+LVYL+G G + GGET FY G GR ++ PL G+ L+H HG RCL HE V RG KY+LR+DV++
Sbjct: 13 SMLSIPAFLSPAECAAWVSWGETSGFEQEKHAQTRWIAHRDNGRLAVQSESIAAALWSRLAPLMPAESTRRGAVACGCNPNIRLYRYTPGQRFGQHVDQSNALPGGEQTEWTMLVYLSGGPGQE------------------------------------VVGGETAFYDG---GRRSVVVDPLAGSALLHAHGERCLTHEALEVRRGVKYVLRSDVVF 192
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Match: A0A7S2Z9G1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9G1_9RHOD) HSP 1 Score: 170 bits (431), Expect = 6.830e-48 Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 3
Query: 303 GFERTYHAATAEIAHRDNGRITLDSPEVAAALWARLEPFVPRVLGGREACGCNSNVRLYKYAPGQRFGRHVDESVEDDTGALSQWTVLVYLNGQGGNASAATXXXXXXXXXXXXXXXXXXXXXRRGSAARAQVGLRGGETVFYKGNYGGRVALSFPPLRGACLVHGHGARCLLHEGAPVLRGTKYLLRTDVMYR 884
G +H A+A++AHRDNGRI S E+AA ++ R++ +P GC+SN+RLY+Y GQRFG+HVDES + + G S +T+L+YLN +G LRGGETVFYKGNYG ++ALS+ P G+ L+HGHG+RC++HEG V+ G KY+LRTDVMYR
Sbjct: 5 GSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLNHEG---------------------------------------LRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMYR 159 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1757.1 >prot_S-ischiensis_contig102.1757.1 ID=prot_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=276bp MGKKGTSSRGGRTGTGNAQGEAALPGSRVCGPAVLPPTRQRKKSQALDLQback to top mRNA from alignment at S-ischiensis_contig102:199372..202726- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig102.1757.1 ID=mRNA_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3355bp|location=Sequence derived from alignment at S-ischiensis_contig102:199372..202726- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig102:199372..202726- >mRNA_S-ischiensis_contig102.1757.1 ID=mRNA_S-ischiensis_contig102.1757.1|Name=mRNA_S-ischiensis_contig102.1757.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1656bp|location=Sequence derived from alignment at S-ischiensis_contig102:199372..202726- (Schizocladia ischiensis KU_0333)back to top |