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Homology
BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: D7FQ81_ECTSI (DUF4206 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ81_ECTSI) HSP 1 Score: 243 bits (620), Expect = 5.260e-67 Identity = 148/350 (42.29%), Postives = 186/350 (53.14%), Query Frame = 3
Query: 87 FPDPYDLGYLEDAVVRVHLDKLTPRFKAKGPAKCLAASVGDYLKDLVAFLGRLEAAGATAPRSAAGGAVNAFLLSCDQRGRVQRDGDVAMSLRECCGGXXGPAGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMVKDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLEDARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSRMAARAARRADIALEGE 1136
FPDP++LG LE+ ++RVH DKLTP FKA P + LAA VG YL L+ FLG LEA G RS ++ L +CD+ GR +R GD A+ +R AGG L S DE RL Q+ RCM CG AIA E++G+ KDY PCR DGL+CR CH++ R VIPHR V HWDF HRVC+ A FL+ R PV DLP + P L ++ LR ++ R +L LRR I F + C G L +LL R HLAV+ +SL+D+ K G LL LEE L AHV G C +C R AAR ++ GE
Sbjct: 1118 FPDPFELGTLEEKILRVHCDKLTPNFKANSPTRKLAARVGSYLSGLLRFLGVLEAVGEADVRSRMSRVLHDALSTCDRVGRKRRRGDFALGVR-----IRDIAGGKLGSGVGDEERLRVQKRRCMSCGRAIAAEFLGIKKDYFPCRYADGLFCRSYCHAEDRRVIPHRVVHHWDFVMHRVCKDARVFLDSTRFHPVFDLPALSP-TLFTQQQSLRMVRSRRKQLHLLRRTIFFPVESK---------------------------------CVLGAQLFDKLLEGRVHLAVNPGLYSLKDLMSVKNGDLLHFLEETNEVLAAHVLGGCHVCEGR----AARVCEVCYIGE 1424
BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: A0A6H5KEI0_9PHAE (DUF4206 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI0_9PHAE) HSP 1 Score: 187 bits (474), Expect = 1.010e-47 Identity = 129/363 (35.54%), Postives = 160/363 (44.08%), Query Frame = 3
Query: 117 EDAVVRVHLDKLTPRFKAKGPAKCLAASVGDYLKDLVAFLGRLE----------------------------------------------------------AAGATAPRSAAGGAVNAFLLSCDQRGRVQRDGDVAMSLRECCGGXXGPAGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMVKDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLEDARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEE 1031
++ ++RVH DKLTP FKA P + LAA VG YL L+ FLG LE A G RS +N L +CD+ GR +R GD A+ +R AGG L S DE RL Q+ RCM CG IA E++G+ KDY PCR DGL+CR CH++ R VIPHR V HWDF RHRVC+ A FL+ R PV DLP + P L E+ LR ++ R +L LRR I F C G L +LL R HLAV+ +SL+D+ K G LL LEE
Sbjct: 1149 KEKILRVHCDKLTPNFKANSPTRKLAARVGSYLSGLLRFLGVLEVHILSDSPVNTLFDGLGSLASCQTASPPKIASIRSTPPPGGILLPLFVTPACRPMPLQAVGEVDVRSRMSRVLNDALSTCDRVGRKRRRGDFALGVR-----IRDIAGGKLGSGVGDEERLRIQKRRCMSCGRTIAAEFLGIKKDYFPCRYADGLFCRSYCHAEDRRVIPHRVVHHWDFVRHRVCKDARAFLDSTRFHPVFDLPALSP-TLFTEQQSLRMVRSRRKQLYFLRRTIFFPVECK---------------------------------CVLGARLFDKLLEGRIHLAVNPGLYSLEDLMSVKNGELLHFLEE 1472
BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: A0A836CLT2_9STRA (DUF4206 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT2_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.010e-22 Identity = 105/358 (29.33%), Postives = 151/358 (42.18%), Query Frame = 3
Query: 81 PAFPDPYDLGYLEDAVVRVHLDKLTPRFKAKGPAKCLAASVGDYLKDLVAFLGRLEAAGAT-APRSAA--GGAVNAFLLSCDQRGRVQRDGD---VAMSLRECCGGXXGPAGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMG------MVKDYSPCRLTDGLYCRRRCHS-DSRSVIPHRAVQHWDFQRHRVCQAAARFLEDARVLPVVDLPR-VCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSL--------SEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSR 1088
P FP +L E+A VR HLD+LTPRF+ K + ++ D+L L++ RL A G AP +AA G A AF GR G V + L G + ++ D++RL+ Q C GCG A+ + G + + CRL+ + CRR CH+ D++ +P A+ WD + VC +AAR L+ + +P++ LP + A +E AA + + P+G L S C A+ LG R HLAV D +SL D+ AK GAL L EA + L H T C C +R
Sbjct: 959 PTFPGA-ELAAQEEAAVRAHLDRLTPRFREKALVRDSTLTLRDHLAALLSATRRLVAGGHDIAPMAAAAIGPAAAAFQHFFCGTGRTDAGGRTLVVGLGLERDSGIADTTVDDSAAA---DDSRLQRQGWACAGCGAALEADAAGGPLSLLRPRTHRFCRLSRAVLCRRLCHALDAKRALPRLALDAWDLEPQHVCDSAARLLDATQRIPLLTLPTSITTTANNRESCATNKPTAAPSTAVP---------SSDQPAGVHSLSTGAMRDVAARLRRLRLRLHALRALCTSPSRARCPAAAAIFKAHLGRRKHLAVDLDLYSLSDLALAKSGALDVMLREAAAALAVHATQSCAACLAR 1303
BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: UPI0018DA0871 (LOW QUALITY PROTEIN: differentially expressed in FDCP 8-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA0871) HSP 1 Score: 63.2 bits (152), Expect = 6.530e-7 Identity = 58/224 (25.89%), Postives = 90/224 (40.18%), Query Frame = 3
Query: 426 ETRLEAQRHRCMGCGEAIAMEYMGMVKDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFL---EDARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSR 1088
E+ L AQ +RC C ++ + G V + C YC CH + VIP R + +WDF +VC+ + ++L + VL V DL P L L + R ++ ++ + + R+A E + LL L +R H + DT+SLQD+ +AK G LL L H+ +C LC +R
Sbjct: 438 ESGLAAQNYRCAECRTQLS--FKGDVSEPRQCDYDGHYYCSL-CHWNDTEVIPARVIHNWDFDTRKVCRQSKQYLKLMQRRAVLCVQDLN----PMLFNYVEELSQIKKLREEILIMKMYFLSCRKAM-----------------------------------EDKLLLQ--LQNRPHFVDNPDTYSLQDLIDAKDGTLLGTLSGIHGNYAVHIKIECPLCQAR 617
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 168.3 |
| Seed ortholog evalue | 4.7e-39 |
| Seed eggNOG ortholog | 2880.D7FQ81 |
| Preferred name | PLEKHM2 |
| KEGG ko | ko:K15348 |
| KEGG Pathway | ko05132,map05132 |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0006996,GO:0007030,GO:0008092,GO:0008150,GO:0009987,GO:0010008,GO:0010256,GO:0012505,GO:0016020,GO:0016043,GO:0019894,GO:0031090,GO:0031410,GO:0031982,GO:0032418,GO:0032879,GO:0032880,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051179,GO:0051640,GO:0051641,GO:0065007,GO:0071840,GO:0097708,GO:0098588,GO:0098805,GO:1903525,GO:1903527,GO:1903729 |
| EggNOG free text desc. | positive regulation of ruffle assembly |
| EggNOG OGs | KOG1829@1,KOG1829@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Model size | 1386 |
| Cds size | 786 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815554.704185-UTR-S-ischiensis_contig102:188824..188943 | 1622815554.704185-UTR-S-ischiensis_contig102:188824..188943 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 188825..188943 + |
| 1695739766.450914-UTR-S-ischiensis_contig102:188824..188943 | 1695739766.450914-UTR-S-ischiensis_contig102:188824..188943 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 188825..188943 + |
| 1622815554.7164168-UTR-S-ischiensis_contig102:189999..190098 | 1622815554.7164168-UTR-S-ischiensis_contig102:189999..190098 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 190000..190098 + |
| 1695739766.466247-UTR-S-ischiensis_contig102:189999..190098 | 1695739766.466247-UTR-S-ischiensis_contig102:189999..190098 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 190000..190098 + |
| 1622815554.7297707-UTR-S-ischiensis_contig102:191404..191539 | 1622815554.7297707-UTR-S-ischiensis_contig102:191404..191539 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 191405..191539 + |
| 1695739766.4775784-UTR-S-ischiensis_contig102:191404..191539 | 1695739766.4775784-UTR-S-ischiensis_contig102:191404..191539 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 191405..191539 + |
| 1622815554.8229558-UTR-S-ischiensis_contig102:198221..198468 | 1622815554.8229558-UTR-S-ischiensis_contig102:198221..198468 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 198222..198468 + |
| 1695739766.5625918-UTR-S-ischiensis_contig102:198221..198468 | 1695739766.5625918-UTR-S-ischiensis_contig102:198221..198468 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig102 198222..198468 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815554.7418833-CDS-S-ischiensis_contig102:191539..191640 | 1622815554.7418833-CDS-S-ischiensis_contig102:191539..191640 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 191540..191640 + |
| 1695739766.4870086-CDS-S-ischiensis_contig102:191539..191640 | 1695739766.4870086-CDS-S-ischiensis_contig102:191539..191640 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 191540..191640 + |
| 1622815554.7561347-CDS-S-ischiensis_contig102:193006..193102 | 1622815554.7561347-CDS-S-ischiensis_contig102:193006..193102 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 193007..193102 + |
| 1695739766.4948869-CDS-S-ischiensis_contig102:193006..193102 | 1695739766.4948869-CDS-S-ischiensis_contig102:193006..193102 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 193007..193102 + |
| 1622815554.769078-CDS-S-ischiensis_contig102:193577..193670 | 1622815554.769078-CDS-S-ischiensis_contig102:193577..193670 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 193578..193670 + |
| 1695739766.5031452-CDS-S-ischiensis_contig102:193577..193670 | 1695739766.5031452-CDS-S-ischiensis_contig102:193577..193670 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 193578..193670 + |
| 1622815554.7831092-CDS-S-ischiensis_contig102:195316..195395 | 1622815554.7831092-CDS-S-ischiensis_contig102:195316..195395 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 195317..195395 + |
| 1695739766.512407-CDS-S-ischiensis_contig102:195316..195395 | 1695739766.512407-CDS-S-ischiensis_contig102:195316..195395 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 195317..195395 + |
| 1622815554.7956438-CDS-S-ischiensis_contig102:196663..196972 | 1622815554.7956438-CDS-S-ischiensis_contig102:196663..196972 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 196664..196972 + |
| 1695739766.5307329-CDS-S-ischiensis_contig102:196663..196972 | 1695739766.5307329-CDS-S-ischiensis_contig102:196663..196972 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 196664..196972 + |
| 1622815554.8089757-CDS-S-ischiensis_contig102:198113..198221 | 1622815554.8089757-CDS-S-ischiensis_contig102:198113..198221 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 198114..198221 + |
| 1695739766.5443115-CDS-S-ischiensis_contig102:198113..198221 | 1695739766.5443115-CDS-S-ischiensis_contig102:198113..198221 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig102 198114..198221 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig102.1756.1 >prot_S-ischiensis_contig102.1756.1 ID=prot_S-ischiensis_contig102.1756.1|Name=mRNA_S-ischiensis_contig102.1756.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp
MSLRECCGGGGGPAGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMV KDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLE DARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATT PSGHGHGGGGGSGGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHL AVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSRMAARA ARRADIALEGE* back to topmRNA from alignment at S-ischiensis_contig102:188825..198468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig102.1756.1 ID=mRNA_S-ischiensis_contig102.1756.1|Name=mRNA_S-ischiensis_contig102.1756.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=9644bp|location=Sequence derived from alignment at S-ischiensis_contig102:188825..198468+ (Schizocladia ischiensis KU_0333) GGGAAGGCGACGGTCGCGCTGGTGTTGGGAGGCGTTTTGATGAGGAGGAG
GCCGTTGAGCCGGAGCAGCTGCCGGAGCCTCCGGCGTTTCCCGACCCGTA
CGACCTGGGGTACCTTGAGGTGGGTTCGTTAACCCTTTTAGCCCTGGTAA
ACGGACTCCCATTCTAAAACCCTATGATCTTACGGAGCCAAGGGGTAAAA
AGGATTCGTTGCTGACGGGGGTGGGGTGGTCCACCAACCCCTCGAGTTGG
GTGACGAAGATACTACGGAAGGGCCAAATATATAGGTGTTGAAAAAGCGT
TTCTAGGCCGAATTTGGCTCCCGACCGCGGCAAAACAAAGTGGATCGAAA
AATGTAGGTACCTTGCGGTGGGTTCGCTACTGGCGGGGGTGGTCCACCGA
CCCCTCGAGTTGGGTGACGAAGGTAGGTAGAGTACGCTGCTGCGAGCTGC
GTGCAGCGCAACAACCAACTCTCCGGCAATAAGGTACAGGGGAGCCTTTT
CCCTTTTTTTGTTGTTCTCAACACGCCCACCTGCGTGGGTCGATTTTAGT
GTGTACTTCCAAGTACATGCACGGGACTACGGCAAGCACAACACGGTACT
CGAGTACACGCACACATATATATATACATGCATATAGAGATCATCGGGTA
CCCGACTGCTGGAATATCGTCCGGCTTCTGTCAAGTAACCTCTTCTTAAT
CGTCAGGGGGTTAAAACACGCTGTTGTCCAGGTGTTCACCTCTGTTGCGT
GTGCCCGCCTCTGTCGCGTGTGCGTTCGCCTCTGTTGCACGCGTGTCCGC
CTCCGTTGCGTGTGTGTGTTCACCTCTGTTGCGTGTGCCCGCCGCCTCTG
TTGCGTGTGTGTGCGTGTGCAGGACGCGGTTGTCCGGGTCCACCTGGACA
AGCTCACCCCGCACCACTTAACCCTTTTACCCCTGCTAAATTGGACTTAC
ACACTAAAACCCTATGATTATACGGACCCCAGGGGTAAGAAGGTTAAGCG
CACAAAAGCCTATGTAAGGGCACAGCTCTGTTGCGTGTGTGTTCACCTGT
GTTGCGTGTGCCCGCCTCTGTTGCGTGTGCGTTCGCCTCTGTCGCGCGTG
TGTCCGCCTCTGTTGCGTGTGTGTGCTCACCTCTGTTGCGTGTGCCCGCC
GCCCCTGTCGCGTGTGCGTGTGCAGGACGCGGTGGTCCGGGTCCACCTGG
ACAAGCTGACCCCGCGCTTCAAGGCCAAGGGGCCCGCAAAATGCCTGGCT
GCCAGCGTGGGAGACTACCTCAAGGTGCGACGCCCGACAGGAAACACAAA
CAGCACTCTCCTCAGTGCCACCTGGGGCAGGCGTGTGATGATGGTACATA
CGTACTTACTCGTACATACTTCGAAGTACAAACTACTTGATTTTACAAGC
TGACCCCGCGCTTCAAGGCCAAGGGGGCCGCCAAACGCCTGTCTGCCAGC
GTGGGAGACTGCCTCAAGGCAACCATGCTACAAAAGTGCATTTTTTTGTT
TTGCCCAAATAGCTTTGTCGAATATCGATTGACCAGTTGCTCCAAACACC
TGGCCGCCAGCGTGGGAGACTACCTCGAGATGGGTTTGTTTGTGTCAGAA
CATCTGTATCCATCATGCTTAAAACGACACACATGGCCTCTTGTCCCCTA
AGTTATGCAAGACTCCGTACAGCCAACGCCTGGCCGCCAGCGTGGGAGAC
TACCTCGAGGTGCGTCGGACAGGAGGCACAAACAAGCCTGCTACAGCAGA
GTGTGGTACTACTACTAGTACTCGTACCATGTAGGTAGTGCACGCTCCTG
CCACCCCTGCCACACCTAATATGGCTCTGCCGGGGGAGGGAGGGGGCCTG
ACGACGACGACCGACGACCAGACGACCCGACGACAACCGTTTGTTCAGTC
TCTTTTTTGAGTGGTAGATAAGCAGCGAGTTCCAGGCCCCATGCCAAAAG
GCTCGTCCCAAAACAGGACTCAACGAAGCCCTTCTTCCCCTCGAAGAACA
AAAGAAACAAAAAGTCTCTTTGTTTAAATACGTAAGTAGCTCCTTCCTTC
CCTCCCCTCCCCCCCGCCCCCAGGACCTGGTCGCCTTCCTCGGGCGGTCT
CTTTGTTTAATTAACCCTTTTACCCCTGGTAAATTGGACTTACACACTAA
AACCCTACGACTATACGGACCGGGGGGAAAGGGTCAACTTGAATTAGCCC
CCTCCTGCCTTCCTTCCCCGCCCCCCCCAGGACCGGGTCGGCTTCCTCGG
GCGCCACGAGGCGGCGGGCGCGACCGCCCCGGGGACAAAATTCCCGAGTA
GGTGTCACGCAACAACAACAACAACAACAACAACAACAGCAACCGTTTAT
TCGGTCTCTTTGTTTAATTAAGTAGCTCCTTCCTTCCATCCCCGCCCCCG
GGACCTGGTCGCATCCCTCGGCCGCCTCGGGCGACGACAACCGTTTGTTT
GGTCTCTTTGTTTAACTATCCCTTTCACCCCTGCTAAATTGGACTTACAC
ACTAAACCCTATGACTATACGGACCCCAGGGGTAGAAGGGTGAAGTACAT
AGCTCCTTCCCTCCCCTTCTCCGCCCCCAGGACCTGGTAGCCTTCCTCGG
CCGCCTCGAGGCGGCGGGCGCAACCGCCCCGCGGAGCGCGGCTGGCGGCG
CGGTGAACGCCTTCCTGTTGTCGTGCGACCAAAGGGGGAGGGTCCAGCGG
GACGGGGACGTCGCCATGTCGCTCCGGGAGTGCTGCGGCGGGGGCGGCGG
GCCGGCAGGCGGGGCGCTGAGCTCGTGGGGCGAGGACGAGACGCGGCTGG
AGGCGCAGAGGCATAGGTACGTGTGTTCCTAAGTAGCTACTTGGATGCAG
CGTGGGTCAAACTATCGAACATCGACTATCGATAGATGTATAGATCGGTG
CTGTCGATAAATAGATTGATTTGCTTAGATATTCCATCACTGGGGCGAGG
ACGAGACGAAGCTGGAGGCGCAAAGGCATAGGTACATGGTTGCAGTGATG
GAATATCGATAAGTGGATAGTTGCCGGGCTCGACTGATTTTATGGGTGGC
GCTACAAACTAGAGTGCTTCGAAGTGCTTGGATTTAGTGTGGGTCAAACT
ATCGAATATCGACTGTAGATGGATAGTGGGGCGAGGACGAGACCAGGCTG
GAGGCGCAGAGGCATAGGTACGTCGTTGCAGTGATGGAATATCGAGTAGT
GGATAGTTGTCGGGCTCGACTGATTTTTGGGTGGCGTTACTATGTACCTG
CTTGGATTTGGTGTGGGTCAAACTATCGAATATCGACTATCGATAGATAC
ATAGACTAGTACTACTGTAAGTAGATTAGTACTGTCGATAAATAGATTGT
TTTGCGTAGATATTCCATCACGGGGTGGTTGGGGGGCTGGCGGGCAGAGG
GCGAGGTGCGGCTGGGGGCGGGCGCAGAGGCACAGGCAGGCGGTGGTGGT
GGTGGTGGTGGCGGTGGAGGTGGTGATGGTTATGGTTGCGGAGGAGGAGG
CGGAGGGGGAGGAGGAGGAGGAGGGGGGGGGAGGGGAGGGGGGGGAGGAG
GGGGAGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGAGGGGAGGGGGGA
GGGGGGGGGGAGGGGGAGGGGGGGGAGGGGGGGGGGGGGGGGGAGGAGGG
GGGGGGAGGGGGAGGAGGGGGGGAGGAGGAGGGGGGGGGAGGGGGGGGGG
GGGGGGGAGGGGGAGGGGGAGGGGAGGGGGGAGGGGGGGGGGGGAGGGGG
GGGGAGGGGAGGCGGGGGAGGGGGAGGGGGGGGGGAGGGGGGAGGGGGAG
GGGGGGGAGGGGAGGGGGGGAGGCGGGGGAGGGGGAGGAGGAGGAGGAGG
GCGGGGAGGCCGGGGAAGGGGAGGAGGAGGGGCAGGGGGAGGAGGAGGGG
GAGGGGGAGAGGGAGGGGGAGGCGGGGGAGGGGGAGGGGGAAGAGGAGGA
GGAGGAGGAGAGGGGGGCAGTCAAAACGAGACTGAGTTTGAAAATGCCCC
AGCGTTCGAGTATACTGGCTCCGTTCTCTGAACAGTTGTTGATGGCGCGT
GCGGTCGACGGTCTCTGGACTGAGGCGGGCATGAATCGAGCACGTGTAAA
CTTACCTGCTCACCTCCTCGGTCGACACGCGCGCGCCGGCACGTGCCTGT
GGCCCCTCCCGCTTGGCTCGCCCGTTCGGCAGGTGCATGGGGTGCGGGGA
GGCGATCGCCATGGAGTACATGGGCATGGTGAAGGACTACTCCCCGTGCA
GGCTCACCGACGGACTATACTGCCGGAGGTGAGCACGCTTGTGCTTGATT
ACTTGCCAACAACTTTCCCACTGCAAGAAGAAGTGCAAGAAGGAGGAGGA
GGAGGAGGAGGAGGAAGAGGAGGAGGAGGGGTACTGTCGGAGGAGTGTCG
TGATATTTGCCACTCTGACTCTCGCAGTGTGATCCACACCAGGCCTCAAA
GCACCGAGATTTCAACCCCCCCCCCCCCCCCCCCCCCGCCCCCGCCCGCC
CCTCCCCATGTATGCCCCTTGATAGGTGTTGCCATTCTGACTCTCACAGC
GTAGTTCCACAACGGGCGGTGAAGCACGAAGATTTTCAACCCCCCCTCCC
CGTGCGTGCACCTTGACAGGCGTTGCCATTCTGACTCTCGCAGCGTGATT
CCACACCGGGCGGCAAAACCCGGAGATTTTCAACCCCCCCCCGCCCCCCG
CCCCGCCCCTGCCCCGCCCCCGCCCGCCCCTCCCCGTGCGTGCACCTTGA
CAGGCGTTGCCACTCTGACTCTCGCAGTGTGATTCCACACCGGGCGGTGC
AGCACTGGGACTTCCAGCGACACCGCGTGTGCCAAGCAGCTGCCAGGTAC
TTCGAAGTATGTACGAGTACTGTATTGTGGGAGTCCATGGCTAAGGGCAA
GTTACAGGGACACCGCATTTGCCAAGCAGCTGCCAGGCATGTACACTACT
GTATTGTATTGTACGAGTACAGTACTGCATGTGTACTACTGTACTGTACT
GTACTGTGGGAGTCCATGGCTAGGGGCTAGTTACAGCGACACCGCGTGTG
CCAAGCAGCTGCCAGGCATATATGCTACTGTGTTGTATTGTACAGTGTTG
CACGTGTACTCGATACTGTACTGTACCGTACTGTACGAGTACTGTACTTA
ACACAGCAACACCGCATGTGCGAAGCAGCTGCCAGGCATGTACTGTAGTT
TGTATTGTACAATGGTCTTCGTTTAGAAAATCCCTTGTTTATATAGTCCC
ACTCTAATTTAGAAATATCTACTTTCACCCGCAGAACTAAGGCCTTCTAC
TCGTTCCAGGGCTGTCGGCTAGTAAGCATGCAAGGACTTGGTCGCAAGAC
GGGCCGATGAGTACAGTAGGTACTCGAGTACATACTGTGCGGTACGTGCT
ATGTACAGCGGCACGTGTACAGTACTGTACAGCATGTACGAAGTATGTAC
GAAGTACTCTGTATGTGCCGTGCAGCTGTCGCACTTACTGCTGTGCCGCT
TTGTTTAACCCTTTGCAGGCGTCGGGGCATTCAACTACAGGAGTTGTTCC
TGTTAGTTCCCCCCCCCCCCCCCCCGCCCCCCTCCTCTCCTTCGTCCTCC
TCCTCCTCAAATACTATTGTATTACTCCTGCTACTCCTCCTCCCCCCCCC
TCCCCCTCCCCTACCCGACACAATCCTTCCCTGGCGAGCTAGGGAAGGCC
CACTGTCGGGGACTTTCGTGAGGTGGCCTGCACCTCGCCCTGTGTTCTCC
TCTCAGTACTTCCAAGTACAGTAGTACTTCGAAGTACCGCTTTAACTCTT
GGAGGGCTATAATCTATGGGACGCTAAGTCCACACTAAACCCCTACTCGA
GTACAAGTATAGTTTCGCGTACAAATACTTCCAAGTACTTCGAAGTAGTT
ATTATTGTCCTCAAAGGGTTGGCGCTGTTTATCTTGTGGGCAGGCAATAA
TTCCACACTAAACCCCTACCGTACAGTTTAGCGTGCAAATAGTTATTCGT
GTCGTGAAGGGGTTAATGCTGTTTTGGTTTGACATTACCCGACCGAGGCG
CGGGGTCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGTGAATATAT
ATATATATATATATATATATATATTACCCAACGCAATGATCGTTGTGGTT
TACTAGTACCTGTGCACATACTGGTCAATATAGCTGTAGGTTCATAACTA
CTGTACCTACCCACACTCTACACACAAACCACTAATATAGGAACACTCAA
TTCTTGAATGGGACAACTACTGTTCCTAGTACGAGAACAGTCAATCTCAC
ACGCGTGCGGTTGTACCTCGTTACAATTCACATGAATCACCACCTACCCA
CACTCTGTTTTTCTTGTGGGCAGGTGCCTGGAGGACGTAAACTATTGGGA
CACTAATTCCACATTAAACCCCTACAGTTTACATAGCATAAAAATAGTTG
TTAGTGTCCTCAAAGGGATATCGCTTTTTTTCTTGTGGGCAGGTTCCTGG
AGGATGCGCGTGTGCTGCCGGTGGTGGACCTGCCCCGCGTCTGCCCGCCG
GCCTTGCTCAAAGAGAGGACGGTGAGTGCGTGGAGCCGGTGGCCGTGTCG
AGGAGTGGAAAGGGGCGGTGGGTGATTCATATGAATTGTAATTGTAGCGA
GGTACAATCGCACGTGTGTGAGATTGAGTGTTCTCGTACCAGGTATTTAA
TTTAGTGGCTATCACATTGACGAGTTGAGTGTTCTCGTTTTAGTGGTTAC
ATGAGGACGGTAAGTGCGTGGAGCCGGTGCAAGAGTGCCATCGGCCTCGA
TCGACACATTTGTGAACGAACGCGTCACTTTTGGGGATGAATGTTTCAGT
TTTTTAGACGTCATCGTTCTGTTTGGTACTTAGCTGATTGCTCGAGCAGC
ACATCATCCAATTGCTTTAGAGCGCCGTCGATACGCACAATATTAATATT
ATTAATAATAATAATAGTATAAAATGTGCGCGCGGCGGATGGCTTGCGCT
GCACTCCGACGACCTTTCTTTACAGGCTGCTCGAACAAGCGAAAACTTGT
ATAGCTCTATATTTTGATCGCGGCGCGTTTTGTTTCAACAAAAAACTCCC
CGACCTCGACGGCGACTTTTTTGGACTCACAAAACAGCTGCTAGTGCACT
ACTGTACTGTACTCTACTTCCAACAAGTCTACATCGTCCTCGACAACACG
TACGTGAACCCCCCTCCCCCCCCCGCCTTTTCTTCCCCCCTCCTTGTTCT
TAGTTCTTTGATGTGATAATCACTATACCACACTCAATCCTTAAATTGAC
GACCACTAATACGAAAACATTCAATCTCACACACGTGCGATTGTACCTCG
TTTCAATTTATATGAATCACCGTTAGCCACTAATACGAGAAAACTCAATC
TCACACACGTACGATTGTACCTCGTTACAGTCTATATGAACCACCCCACC
GCCACCACGACTGCCACGCCAGGTCCTCCGCGACGCCCATGCCGCCCGTG
CCAAGCTCTGCAACCTCCGGCGTCAACTAGGGGTACTTAGGCCCAAAATG
GCGGTGAACTAGGCCCTAATTAACCTCTAAGAGCCAACCCTGCCGGCCAC
CGCTGCCGCCAGGTCCTCCGCGACGCCCAGGCCGCCCGCGCCAGCCAGTG
ATGGAATATCTAAGCAAATCAACCTGTTTATCGACAGTACTGATCTCCTT
CGAAGCATATATCTATCGATGAGCGATATTCGATAGTTTGACCCTCACTA
AATCCAACTGCAGTAGGCCGTAACTCCACCCACTAAATCAGTCGAGCCCA
ACAACTACCTACTGATCGATGTTCCATCGCTACCGCCAGGTCCTCCGCGA
CGCCCAGGCCGCCCGTGCCAAGCTCTGCAACCTCCGCCGCTGGATCATCT
TTGGACGCCGCGCCACCACCCCCAGCGGGCACGGGCACGGGGGCGGCGGC
GGCAGCGGCGGCCCGGGCGTTTCCAATGGCAGTTACAACTCCAGCCTGAG
TGAGGATACCCGGCCCTGCGCAGAGGGGCAGGCCCTGCTGGGCGAGCTGC
TGGGGAGCAGGGGGCACCTGGCGGTTTCGACGGACACCTTCTCGCTGCAG
GACGTGGAGGAGGCCAAGGGCGGGGCGTTGCTGCCGCGGCTCGAGGAGGT
GGGGGAGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGTGCACGGATTG
TGGGAGATCGTGTGTGTGTGTGTGTGCGTGCGTGTGTGTGTGCGCGTGTG
GGGGGGCTTTGCTGCCGCGGCTTGAGGAGGTGGGGGAGGTTGTGTGTATG
CGTGTGTGGATGCCTTCCCACTGCAGGACGTGGAGGAGGCCAAGGGCGGG
GCGTTGCTGCCGCGGCTCGAGGAGGTGGGGAGAGAGAGGGAGGGAGGGAG
AGAGACAGAGAGAGAACGAGAGAGAGAGTGTGTGTGTGTGTGTGTGGATG
CCTTCTAGCTGACGAGAGAGAGAGAGAGAGAGAGAGTGTGTGTGTGTGGA
TGCCTTCCAACTGAAAGGACGTGGAGGAGGTCAAGGGCAGGGCGTTGCTG
CCACGGCTCGAGGACATGGGAGATGATTCATGTACAGTAAATTGTAGCGA
GCTACAATCGCATATGGGTGAGATTGAGTGTTCTCGTATTAGTAGTTGTC
CGAGGTGGGCCCGGGGAGATTGTGTGTGTGTGTGTGTGTGTGCACGCGCG
CGTGCGTGCGTGTGTTTGTGTGGGTGTTTTTTTTCGTGCGCTAGGGGCGC
ACGTGGTCTGTGTAGTTGTAAGTATGTCATGTGCCTGGCCATGCAAGTGG
ACTTTGTTCAGCTGTCATCATCAGAGAGAACCCACCTGTGATGCCGTCCA
CAGCATCCCTTCCCACAAAGCCTCCCCTGGAGGGCCATCATCTGGACACG
TCTTAAGCAATCCATGGCCATGCGGCTACTTAGCCCTTGTACTCCTGGCA
TCCGTATAACCGTAGGGTTTTCGTGTGCAAGTCCAATTTGGCGGGGGTAA
AAGGGTGAAGGCAAGCAACTAAACTATTCGCACACCCCCCCCCGCCCCTG
CCCCGACCTTGCCGCCCGCCTTGGTGCCTGCCGCTGCGCCACCACCACCA
CCACCTCCCACCCCCACCGCCACTGCAACCACCACCACCACCACCACCAC
CACCCACCACCACCACCACCGCCACCTCCACCACCACCACCACCACCACC
ACCACCACCACGACAACCTCGTCGACCACTGCACCACCAACCACCCCATG
GATGCCACCGTGACGCCTTCCATGGTGCGTGAACGGAAGGCGGTGTCCCG
CCTGACTGCGCACGTGACGGGGGACTGCCGGCTGTGTGGCTCGCGCATGG
CGGCGCGGGCGGCCCGGCGCGCCGACATCGCCCTGGAGGGCGAGTGAGCC
TTGGGCACTCCATACGCCTCAGGACTTTCCCCCAGGGAGGAGTCCGTGCA
AGGTCACTATCGACACTGGTGGTTCCGGCTGTCTATAAGGTGTACCATTG
TACATACGCGGCTGCATAATATGACGACGAGCCTAGGCTCGCTCAGGCTC
AAGTTGTGCTATTTAAATCCTCGGCCGAGACGAGAGCTGCCGCCGCGAAA
ATGCAAAAGGCCTGTCCAGAGCTCGCCAGTCCAAAAATAACAAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig102:188825..198468+ >mRNA_S-ischiensis_contig102.1756.1 ID=mRNA_S-ischiensis_contig102.1756.1|Name=mRNA_S-ischiensis_contig102.1756.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1572bp|location=Sequence derived from alignment at S-ischiensis_contig102:188825..198468+ (Schizocladia ischiensis KU_0333) ATGTCGCTCCGGGAGTGCTGCGGCGGGGGCGGCGGGCCGGCAGGCGGGGC GCTGAGCTCGTGGGGCGAGGACGAGACGCGGCTGGAGGCGCAGAGGCATA GATGTCGCTCCGGGAGTGCTGCGGCGGGGGCGGCGGGCCGGCAGGCGGGG CGCTGAGCTCGTGGGGCGAGGACGAGACGCGGCTGGAGGCGCAGAGGCAT AGGTGCATGGGGTGCGGGGAGGCGATCGCCATGGAGTACATGGGCATGGT GAAGGACTACTCCCCGTGCAGGCTCACCGACGGACTATACTGCCGGAGGT GCATGGGGTGCGGGGAGGCGATCGCCATGGAGTACATGGGCATGGTGAAG GACTACTCCCCGTGCAGGCTCACCGACGGACTATACTGCCGGAGGCGTTG CCACTCTGACTCTCGCAGTGTGATTCCACACCGGGCGGTGCAGCACTGGG ACTTCCAGCGACACCGCGTGTGCCAAGCAGCTGCCAGGCGTTGCCACTCT GACTCTCGCAGTGTGATTCCACACCGGGCGGTGCAGCACTGGGACTTCCA GCGACACCGCGTGTGCCAAGCAGCTGCCAGGTTCCTGGAGGATGCGCGTG TGCTGCCGGTGGTGGACCTGCCCCGCGTCTGCCCGCCGGCCTTGCTCAAA GAGAGGACGGTTCCTGGAGGATGCGCGTGTGCTGCCGGTGGTGGACCTGC CCCGCGTCTGCCCGCCGGCCTTGCTCAAAGAGAGGACGGTCCTCCGCGAC GCCCAGGCCGCCCGTGCCAAGCTCTGCAACCTCCGCCGCTGGATCATCTT TGGACGCCGCGCCACCACCCCCAGCGGGCACGGGCACGGGGGCGGCGGCG GCAGCGGCGGCCCGGGCGTTTCCAATGGCAGTTACAACTCCAGCCTGAGT GAGGATACCCGGCCCTGCGCAGAGGGGCAGGCCCTGCTGGGCGAGCTGCT GGGGAGCAGGGGGCACCTGGCGGTTTCGACGGACACCTTCTCGCTGCAGG ACGTGGAGGAGGCCAAGGGCGGGGCGTTGCTGCCGCGGCTCGAGGAGGTC CTCCGCGACGCCCAGGCCGCCCGTGCCAAGCTCTGCAACCTCCGCCGCTG GATCATCTTTGGACGCCGCGCCACCACCCCCAGCGGGCACGGGCACGGGG GCGGCGGCGGCAGCGGCGGCCCGGGCGTTTCCAATGGCAGTTACAACTCC AGCCTGAGTGAGGATACCCGGCCCTGCGCAGAGGGGCAGGCCCTGCTGGG CGAGCTGCTGGGGAGCAGGGGGCACCTGGCGGTTTCGACGGACACCTTCT CGCTGCAGGACGTGGAGGAGGCCAAGGGCGGGGCGTTGCTGCCGCGGCTC GAGGAGGCGGTGTCCCGCCTGACTGCGCACGTGACGGGGGACTGCCGGCT GTGTGGCTCGCGCATGGCGGCGCGGGCGGCCCGGCGCGCCGACATCGCCC TGGAGGGCGAGTGAGCGGTGTCCCGCCTGACTGCGCACGTGACGGGGGAC TGCCGGCTGTGTGGCTCGCGCATGGCGGCGCGGGCGGCCCGGCGCGCCGA CATCGCCCTGGAGGGCGAGTGA back to top
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