prot_S-ischiensis_contig102.1756.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig102.1756.1
Unique Nameprot_S-ischiensis_contig102.1756.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length262
Homology
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BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: D7FQ81_ECTSI (DUF4206 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ81_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.290e-42
Identity = 101/248 (40.73%), Postives = 125/248 (50.40%), Query Frame = 0 
Query:   14 AGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMVKDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLEDARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSRMAARAARRADIALEGE 261
            AGG L S   DE RL  Q+ RCM CG AIA E++G+ KDY PCR  DGL+CR  CH++ R VIPHR V HWDF  HRVC+ A  FL+  R  PV DLP + P  L  ++  LR  ++ R +L  LRR I F   +                                  C  G  L  +LL  R HLAV+   +SL+D+   K G LL  LEE    L AHV G C +C  R    AAR  ++   GE
Sbjct: 1215 AGGKLGSGVGDEERLRVQKRRCMSCGRAIAAEFLGIKKDYFPCRYADGLFCRSYCHAEDRRVIPHRVVHHWDFVMHRVCKDARVFLDSTRFHPVFDLPALSP-TLFTQQQSLRMVRSRRKQLHLLRRTIFFPVESK---------------------------------CVLGAQLFDKLLEGRVHLAVNPGLYSLKDLMSVKNGDLLHFLEETNEVLAAHVLGGCHVCEGR----AARVCEVCYIGE 1424
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BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Match: A0A6H5KEI0_9PHAE (DUF4206 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI0_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 8.310e-38
Identity = 89/213 (41.78%), Postives = 108/213 (50.70%), Query Frame = 0 
Query:   14 AGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMVKDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLEDARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATTPSGHXXXXXXXXXGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHLAVSTDTFSLQDVEEAKGGALLPRLEE 226
            AGG L S   DE RL  Q+ RCM CG  IA E++G+ KDY PCR  DGL+CR  CH++ R VIPHR V HWDF RHRVC+ A  FL+  R  PV DLP + P  L  E+  LR  ++ R +L  LRR I F                                      C  G  L  +LL  R HLAV+   +SL+D+   K G LL  LEE
Sbjct: 1294 AGGKLGSGVGDEERLRIQKRRCMSCGRTIAAEFLGIKKDYFPCRYADGLFCRSYCHAEDRRVIPHRVVHHWDFVRHRVCKDARAFLDSTRFHPVFDLPALSP-TLFTEQQSLRMVRSRRKQLYFLRRTIFFPVECK---------------------------------CVLGARLFDKLLEGRIHLAVNPGLYSLEDLMSVKNGELLHFLEE 1472
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig102.1756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ81_ECTSI1.290e-4240.73DUF4206 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KEI0_9PHAE8.310e-3841.78DUF4206 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025258Putative zinc-RING and/or ribbonSMARTSM01175DUF4206_2coord: 57..257
e-value: 1.9E-7
score: 7.9
IPR025258Putative zinc-RING and/or ribbonPFAMPF13901zf-RING_9coord: 56..146
e-value: 1.4E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR12326PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEINcoord: 25..141
coord: 183..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig102contigS-ischiensis_contig102:191540..198221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig102.1756.1mRNA_S-ischiensis_contig102.1756.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig102 188825..198468 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig102.1756.1 ID=prot_S-ischiensis_contig102.1756.1|Name=mRNA_S-ischiensis_contig102.1756.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=262bp
MSLRECCGGGGGPAGGALSSWGEDETRLEAQRHRCMGCGEAIAMEYMGMV
KDYSPCRLTDGLYCRRRCHSDSRSVIPHRAVQHWDFQRHRVCQAAARFLE
DARVLPVVDLPRVCPPALLKERTVLRDAQAARAKLCNLRRWIIFGRRATT
PSGHGHGGGGGSGGPGVSNGSYNSSLSEDTRPCAEGQALLGELLGSRGHL
AVSTDTFSLQDVEEAKGGALLPRLEEAVSRLTAHVTGDCRLCGSRMAARA
ARRADIALEGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025258Zf-RING_9