mRNA_S-ischiensis_contig10.1645.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig10.1645.1
Unique NamemRNA_S-ischiensis_contig10.1645.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A6H5KKA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA5_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 2.250e-122
Identity = 185/283 (65.37%), Postives = 225/283 (79.51%), Query Frame = 3
Query:  522 GQEGPELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTF-ELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGG 1367
            G+EGP LPW  S+AGPE PL+YMPF+EH+L VLA++F E+ ALP+ ++L+F  N  KKAR+LSM+F SPE+R+VR TYFDAG  VQVLNAV+YPDPSLDMP+LG+DLISFG KHLAGIDFQP+FD +  + R++  LAPIKA+YPEFAQ+MS RFYDSARFFSE MLFGRYED ++++++LFPAF EY+S Y+  L  AA    GG P P +        +ARVLDR RAYDQYNAERDPAHGLF  YFG+ +S+ FMD+FLF LS RPEGGYPKG   G GG
Sbjct:  152 GKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVENTDKKARMLSMSFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDNDSCRCRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVEEKLFPAFDEYLSLYISDLLKAAEE--GGNPSPEA--------QARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPEGGYPKGTARGGGG 424          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A835YZG6_9STRA (Ferredoxin-dependent bilin reductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG6_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.240e-95
Identity = 159/276 (57.61%), Postives = 189/276 (68.48%), Query Frame = 3
Query:  540 LPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSF--ASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPK---GPP 1352
            LPW +S AG EHPL YMPF+++ L  L    EL+  P+ EE++   + + AK  RI S+ F  P IR+ R TYFDAG  VQV N VVYPDPS+D P+LGVDLI+FGKKHLAGIDFQP+  +  Y  R+ + L  IKARYP+ +Q MS RFYDSARFFS  MLF R+ED  ++  +LFPAF+EY+S YV+ L  A         P VS     P  R  VL+R  AYDQYNAERDPAHGLFV YFG EWS+ FMDDFLF LS RPE GYPK   GPP
Sbjct:  116 LPWIESCAGAEHPLLYMPFMDYSLEQLVSQLELQPTPMDEEMALQHSLHPAKPGRIASLLFNGPLIRKARLTYFDAGPAVQVFNMVVYPDPSIDAPILGVDLIAFGKKHLAGIDFQPLHADAGYADRYLSTLGDIKARYPDLSQTMSARFYDSARFFSPHMLFARFEDRDLVPSQLFPAFSEYLSEYVEMLSKA---------PRVS----TPEFRDAVLERHTAYDQYNAERDPAHGLFVQYFGHEWSEKFMDDFLFELSTRPEEGYPKVEHGPP 378          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: D8LGZ4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ4_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 7.110e-95
Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 3
Query:  687 KKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGG 1367
            K A   SM F SPE+R+VR TYFDAG  VQVLNAV+YPDPSLDMP+LG+DLISFG KHLAGIDFQP+FD++  + R++  LAPIKA+YPEFAQ+MS RFYDSARFFSE MLFGRYED +++ ++LFPAF EY+S Y+  L  AA    GG P P +        RARVLDR RAYDQYNAERDPAHGLF  YFG+ +S++FMD+FLF L+ RP GGYPKG   G GG
Sbjct:   36 KNACNTSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFEEYLSLYISDLLKAAEE--GGNPSPEA--------RARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSENFMDNFLFELNTRPAGGYPKGAARGGGG 252          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A5J4YL15_PORPP (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL15_PORPP)

HSP 1 Score: 232 bits (591), Expect = 1.020e-68
Identity = 119/262 (45.42%), Postives = 165/262 (62.98%), Query Frame = 3
Query:  537 ELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGI-DFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSV 1319
            ELP+ +S+AG E  L +MPF+ H   V+  TF++  LP  +EL+F S+  K ARI S  + +PE R++R TY DAG   QV N+V YPDP  D+P+LG+D +SFGKK +  I DFQP+  +  Y  ++ +PLAP+KA+Y   A +MS +FYD   FFS+ + FGR+++   + + LFPAF EY+  Y + +Q+A          P S     P   A  L RQ+ YDQY+AERDPA GLF  YFG EW++ F  +FLF  SV
Sbjct:   65 ELPYERSIAGEEFELLFMPFVLHQNKVMRDTFQVSDLPFDDELAFQSSTKKAARIESWCYKTPEFRKIRSTYIDAGIQAQVFNSVWYPDPKYDLPLLGIDFLSFGKKKVICIMDFQPLTQDAAYLEKYISPLAPVKAKYKSLAGEMSAKFYDENVFFSKQLAFGRFDNAGPVMEELFPAFKEYLDVYFEHMQSAT---------PTSD----PEQIALNLQRQKDYDQYSAERDPAIGLFSTYFGPEWAEKFTHEFLFEHSV 313          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S2RIT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT5_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.330e-68
Identity = 126/265 (47.55%), Postives = 159/265 (60.00%), Query Frame = 3
Query:  543 PWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEE--EYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPE 1328
            PW  ++A     L YM F  H   +L        LP+ + LS A N  K+ARI S  + +   R+VR TYFDAG+ VQV N++ YP    D PVLGVDL+ FGKK  LA ID QP+ D E  EY A  + P   +K ++P    +MS RFYD  +FFS+GMLFGR+ED S I   + PAF EY+  YVD ++     PR          D    + ARVL +Q AYDQY+AERDPAH LFV+YFG+EW+D +M DFLF LS  PE
Sbjct:   61 PWTSTIASDGAALHYMDFYRHQEEILVGKLGATPLPLKDSLSGAVNHGKEARIASACYETDVFRKVRMTYFDAGNKVQVFNSLWYPRLEYDAPVLGVDLLCFGKKKILAVIDCQPLVDRENSEYHAEFSQPFLRVKEQFPSLCGKMSNRFYDENQFFSDGMLFGRFEDTSPIASEVLPAFQEYLQVYVDLVKDV---PR----------DTTDKATARVLAQQAAYDQYSAERDPAHALFVSYFGEEWADEYMSDFLFELSTPPE 312          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S4VTV3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTV3_9STRA)

HSP 1 Score: 227 bits (579), Expect = 3.290e-66
Identity = 131/291 (45.02%), Postives = 175/291 (60.14%), Query Frame = 3
Query:  540 LPWRQSVAGP--EHPLSYMPFLEHLLGVLAQTF-ELEALPVPE-----ELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFDEEEYKARHAAP----LAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGGPP 1373
            +PWR +V     E+PL YMPF E  +  + +T   L  +P        + SF  N  KKARI++  + S E R++R +Y+DAG N QV N+V YPDP  ++PVLG+DL++F  KK+LA +DFQP++D+E   A HA      L PIK  Y     +MS +FYD  +FFS+ MLF R+ED  V+ + LFPAF  YV T+VD + +  A             D +P+S  RV+ RQ+ YD Y+AERDPA GLF   FG+ W+D F+ DFLF LS R EGG  K PP   GG P
Sbjct:   77 MPWRDTVGSTDKENPLLYMPFWEWQMEFMKETLTNLRVVPAKSSTSNLDFSFNDNKEKKARIVNHCYASDEYRKIRMSYYDAGDNTQVFNSVWYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLYDDE---AEHATTFEHLLRPIKDEYDSLKGRMSAKFYDETKFFSQQMLFARFEDEGVVIEDLFPAFQRYVKTHVDLVSSTEA-------------DTQPSSVERVMTRQQEYDTYSAERDPATGLFAAMFGKAWADEFVYDFLFSLSERAEGGL-KIPPMMGGGAP 350          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S3ENW0_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENW0_9RHOD)

HSP 1 Score: 223 bits (568), Expect = 1.620e-65
Identity = 121/266 (45.49%), Postives = 163/266 (61.28%), Query Frame = 3
Query:  537 ELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFE-LEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPE 1328
            +LPW +S+AG +  + +MPF+E    V+  T + L+ LP   ELSF S+  KKA+I S  F S   R++R TY DAG   QV N+V YPDP  D+P+LGVD +SFGKK  L  +DFQP+  E+ Y  ++   L PIK++YP  A QM+ RFYD  +FFS+ + FGR+++P  + + LFPAF EY++TYV   + A A                P   A  L+ Q+ YD Y+AERDPA GLF  YFG EW+  F  DFLF LS  P+
Sbjct:   45 KLPWEKSIAGDDVEMLFMPFIELQNRVMFDTQKNLKDLPFESELSFQSSSRKKAKIESWNFQSDTFRKIRLTYIDAGIPAQVFNSVWYPDPKYDLPLLGVDFLSFGKKKILCVLDFQPLKQEKAYLEKYCEILDPIKSKYPSLAGQMTARFYDENQFFSKQLAFGRFDNPQPVMEELFPAFEEYLNTYVKMFKDAPATED-------------PKEIAANLELQKEYDIYSAERDPAVGLFSTYFGGEWAVKFTHDFLFELSETPD 297          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S0YZG3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YZG3_9CRYP)

HSP 1 Score: 223 bits (567), Expect = 1.080e-64
Identity = 123/273 (45.05%), Postives = 166/273 (60.81%), Query Frame = 3
Query:  540 LPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFE-LEALPVPEELSFASNDAKK--ARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSV---RPEGGY 1337
            +PW +SV G EH L YMPF+E     + + FE LE  P  E LSF     KK  A I S  F +   R++R TY DAG   QV N V+YP+   D+P+LG+D +SFGK   LA +D QP+  + +Y  R+  PL PI+++Y +   +MS +FYD ARFFS+ +LFG+++DPS + + LFPAF EY   YV  +         GG   + G D  P + ARV   Q+ YDQY+AE+DPA GLF  Y+GQEW+D F  +FLF  SV   + EGG+
Sbjct:   96 IPWTESVGGKEHKLLYMPFVEWQYKYMKENFETLEDKPFAEPLSFQRTPEKKPPAVIESWQFKTEHFRKIRMTYIDAGVRAQVYNCVIYPEYKYDLPILGIDFLSFGKSRVLAILDLQPLTQDPDYLERYIQPLRPIRSKYEDLCGRMSSKFYDEARFFSKELLFGKFDDPSPVMESLFPAFKEYFEHYVGMV---------GG---LEG-DESPEAIARVKQLQKDYDQYSAEKDPAVGLFATYWGQEWADRFTHEFLFSESVPVPKAEGGH 355          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S1Z3N6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N6_TRICV)

HSP 1 Score: 220 bits (561), Expect = 2.370e-63
Identity = 127/301 (42.19%), Postives = 180/301 (59.80%), Query Frame = 3
Query:  540 LPWRQSVAGPE--HPLSYMPFLEHLLGVLAQTFE----LEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFD-EEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGY---PKG------PPPGCGGPPGQRKGQ 1391
            +PW +++   E  +PL YMPF E  +  +         +E      +  +  N  KKARI++  + S E R++R +Y+DAG + QV N+V YPDPS ++PVLG+DL++FG KK+LA +DFQP+++ EE++ A+    L PIK  Y     +MS +FYD  +FFS+ MLF R+ED +V+ D L PAF  YV  ++  L++            V   D+  + +A VL+RQRAYD Y+AERDPA GLF   FG+EW++ F+ DFLF LS R EGG    P G      PP G G P G  +GQ
Sbjct:   98 MPWVETIGSSEFENPLLYMPFWEWQMDFMGSELSNLRPIEHCDDGSDFGYNENSKKKARIVNHCYASDEYRKIRMSYYDAGDSTQVFNSVWYPDPSYNLPVLGIDLLAFGRKKYLAIVDFQPLYENEEDHAAKFEHILEPIKEEYDSLKGRMSAKFYDETKFFSKQMLFARFEDDNVVSDDLMPAFQRYVQAHLKLLKS------------VKPDDSLQSQKA-VLERQRAYDTYSAERDPAAGLFAAMFGKEWAEDFIFDFLFSLSERKEGGIQIPPMGMMGGGPPPQGXGAPQGAPQGQ 385          
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A1Z5JYB7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYB7_FISSO)

HSP 1 Score: 213 bits (542), Expect = 7.080e-61
Identity = 120/272 (44.12%), Postives = 164/272 (60.29%), Query Frame = 3
Query:  540 LPWRQSVAGPEHP----LSYMPFLE-HLLGVLAQTFELEALPVPE---ELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFD-EEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRP 1325
            +PW+ S+  P++P    L YMPF E H+  +      L  +P      + S+  N  KKARI+S+  +S E R++R TY+DAG N QV NAV YPDP  ++PVLG+DL++F  KK+LA +DFQP+ + EE++       L PIK +Y     +MS +FYD  +FFS+ MLF R+ED S+I + LFPAF  YV T++D ++            PV       A    VL RQ+AYD Y+AERDPA GLF   FG EW+  F+ DFLF +S RP
Sbjct:   86 MPWKSSI-DPKYPEEEDLLYMPFWEWHMSFMKENLTNLRVMPCTNGKTDFSYNENIQKKARIVSLCASSSEYRKIRMTYYDAGENTQVYNAVFYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLHENEEDHATTFEHRLQPIKEQYENLKGRMSSKFYDETQFFSQQMLFSRFEDESIISNELFPAFQSYVQTHLDLIREV---------DPVE------ADLDMVLKRQKAYDTYSAERDPATGLFTAMFGAEWAMDFVHDFLFSMSERP 341          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKA5_9PHAE2.250e-12265.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZG6_9STRA1.240e-9557.61Ferredoxin-dependent bilin reductase-domain-contai... [more]
D8LGZ4_ECTSI7.110e-9565.64Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A5J4YL15_PORPP1.020e-6845.4215,16-dihydrobiliverdin:ferredoxin oxidoreductase ... [more]
A0A7S2RIT5_9STRA3.330e-6847.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4VTV3_9STRA3.290e-6645.02Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3ENW0_9RHOD1.620e-6545.49Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A7S0YZG3_9CRYP1.080e-6445.05Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S1Z3N6_TRICV2.370e-6342.19Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Z5JYB7_FISSO7.080e-6144.12Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:3401599..3403616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.5
Seed ortholog evalue4.9e-78
Seed eggNOG ortholog2880.D8LGZ4
EggNOG free text desc.Ferredoxin-dependent bilin reductase
EggNOG OGs28II3@1,2S2CU@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionFerredoxin-dependent bilin reductase
Ec32 orthologEc-14_001370.1
Exons3
Model size1505
Cds size1281
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1645.1prot_S-ischiensis_contig10.1645.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig10 3401656..3403449 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.0653653-UTR-S-ischiensis_contig10:3401598..34016551622815543.0653653-UTR-S-ischiensis_contig10:3401598..3401655Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3401599..3401655 -
1695739759.0792027-UTR-S-ischiensis_contig10:3401598..34016551695739759.0792027-UTR-S-ischiensis_contig10:3401598..3401655Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3401599..3401655 -
1622815543.1170673-UTR-S-ischiensis_contig10:3403449..34036161622815543.1170673-UTR-S-ischiensis_contig10:3403449..3403616Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3403450..3403616 -
1695739759.1265464-UTR-S-ischiensis_contig10:3403449..34036161695739759.1265464-UTR-S-ischiensis_contig10:3403449..3403616Schizocladia ischiensis KU_0333UTRS-ischiensis_contig10 3403450..3403616 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.0782979-CDS-S-ischiensis_contig10:3401655..34021901622815543.0782979-CDS-S-ischiensis_contig10:3401655..3402190Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3401656..3402190 -
1695739759.090587-CDS-S-ischiensis_contig10:3401655..34021901695739759.090587-CDS-S-ischiensis_contig10:3401655..3402190Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3401656..3402190 -
1622815543.0946271-CDS-S-ischiensis_contig10:3402435..34028961622815543.0946271-CDS-S-ischiensis_contig10:3402435..3402896Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3402436..3402896 -
1695739759.1009107-CDS-S-ischiensis_contig10:3402435..34028961695739759.1009107-CDS-S-ischiensis_contig10:3402435..3402896Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3402436..3402896 -
1622815543.1064374-CDS-S-ischiensis_contig10:3403164..34034491622815543.1064374-CDS-S-ischiensis_contig10:3403164..3403449Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3403165..3403449 -
1695739759.1090007-CDS-S-ischiensis_contig10:3403164..34034491695739759.1090007-CDS-S-ischiensis_contig10:3403164..3403449Schizocladia ischiensis KU_0333CDSS-ischiensis_contig10 3403165..3403449 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig10.1645.1

>prot_S-ischiensis_contig10.1645.1 ID=prot_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=427bp
MGRSSRRSVMRATGEQRCCGCKGGASPGSASHNWRSRALFCTAVVACFLS
STWTVAAWGRPVMQPGFVCGGSGAWTRPSATARRGARRARTEIGMVTSVQ
PRQQTRQVVLPPPPPPPPGQEGPELPWRQSVAGPEHPLSYMPFLEHLLGV
LAQTFELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGS
NVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARH
AAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFP
AFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQ
YNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGG
PPGQRKGQEGQGQQQAQAAAGAPGQT*
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mRNA from alignment at S-ischiensis_contig10:3401599..3403616-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig10.1645.1 ID=mRNA_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2018bp|location=Sequence derived from alignment at S-ischiensis_contig10:3401599..3403616- (Schizocladia ischiensis KU_0333)
TGCCGACAGACGACAGCGGCAGCACTGTGGCAGGCAAACACACCGTTCGG GCTACGCGCGAGCACAACTGGGCTGCTGGCGAGCAACCACCTGGTCGGCA ACCCCCACCAGGGCCACGGGAGGAGCTTGTAAAGCGGCGAGGGCGTTCTG CCGCAGGTCCCTCCAGCATGGGTCGGTCGTCGAGGCGCAGCGTGATGCGG GCGACGGGCGAGCAGCGTTGTTGCGGGTGCAAAGGAGGGGCTTCTCCCGG TTCTGCCTCCCATAACTGGAGGAGCAGGGCTCTTTTCTGCACCGCCGTGG TGGCTTGCTTCTTGTCAAGCACATGGACCGTTGCTGCCTGGGGCAGGCCT GTCATGCAGCCAGGCTTCGTGTGTGGGGGTTCCGGGGCCTGGACGAGGCC ATCGGCGACTGCCCGACGAGGAGCACGGAGGGCACGGACGGAAATTGGCA TGGTAAGTGCGGAGGGTCGAAGCAATTTCGACGGGATTTGTTGGGGGGAG ACCCTGGGGATGTCGCAAAATGCCAGTTGGCAAACCAGTGGCAAAGAGGA AGGACGACGGCCCCGTTTCCGCCACGTCGATGGTACCGGACATATTGAAG TACACAGAGGTTGCCGTTTGCGCCGTGAACCTGCAGGAGACTTGAGTATT GCCCCCACTTTGTCTCGTTTGCCAACACGAGAGTTGCCTCCCGTTGCCCG TGGTCGTGATTGTGCGACAGGTCACCAGCGTACAACCCAGGCAGCAAACA CGGCAAGTGGTGCTGCCGCCGCCGCCGCCGCCGCCGCCGGGGCAAGAGGG GCCGGAGCTGCCGTGGCGGCAATCCGTGGCGGGGCCAGAGCACCCGCTGA GCTACATGCCCTTCCTCGAGCACCTGCTCGGGGTGCTGGCACAGACCTTT GAGCTGGAGGCCCTGCCGGTGCCGGAGGAGCTCTCGTTCGCCTCCAACGA CGCGAAGAAGGCGCGCATCCTGAGCATGGCCTTCACCAGCCCGGAGATCC GGCGCGTGCGCTTCACCTACTTTGACGCCGGGTCGAACGTGCAGGTGCTG AACGCCGTAGTGTACCCGGACCCCTCCCTGGACATGCCCGTCCTCGGGGT GGACCTGATCTCCTTCGGGAAGAAGCACCTGGCGGGCATCGACTTCCAGC CCATCTTCGACGAGGAGGAGTACAAGGCCAGGTGCGTGAAAGAGAGAACA AAAAGATATGCTTGTGCCGCCCGGCCGCGGCCATATGTCCCCGTCCGTGC ACGACACCCCCCCCCTCTGTGAGGAGCTGGGCCGCAAAATTGGGCACACT TTTTGGCTTGCATCGTGCACTGCAGACTGGCTTTTCCTTTTGGACAAAGC AGCTGCCCTAGCAGCAAGGTCCGCTGTGGCTTACCCCCCCAAACCTCTCC TCCAAAAAACGCCCGCTCGCTTGCAGGCACGCCGCGCCCCTGGCCCCCAT CAAGGCCCGCTACCCGGAGTTTGCCCAGCAGATGTCCCAGCGCTTCTACG ACAGCGCGCGCTTCTTCAGCGAGGGCATGCTGTTCGGCCGGTACGAGGAC CCCTCGGTCATACAGGACCGGCTCTTCCCGGCCTTCGCCGAGTACGTTTC AACGTACGTCGACGCCCTGCAGGCGGCGGCCGCCCGGCCCCGGGGCGGCG GCCCCCCGCCGGTGAGCGGCTGGGACGCGCGGCCCGCCTCCCGCGCCCGC GTTCTGGACCGGCAGCGGGCGTACGACCAGTACAACGCCGAGCGGGACCC GGCCCACGGTCTGTTTGTGAACTACTTTGGGCAGGAGTGGTCGGACTCGT TCATGGACGACTTCCTCTTCCCGCTCAGCGTCAGGCCCGAGGGGGGGTAC CCCAAGGGCCCGCCGCCGGGGTGCGGGGGGCCCCCGGGCCAGAGGAAGGG GCAGGAGGGGCAGGGGCAGCAGCAGGCGCAAGCGGCCGCGGGGGCGCCAG GGCAGACCTGAGCCGGGGCGGGACGGCGCGGGCAGAAGGGGTGGTGTGTG TGCCCTTGCCTTGCCTGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig10:3401599..3403616-

>mRNA_S-ischiensis_contig10.1645.1 ID=mRNA_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2562bp|location=Sequence derived from alignment at S-ischiensis_contig10:3401599..3403616- (Schizocladia ischiensis KU_0333)
ATGGGTCGGTCGTCGAGGCGCAGCGTGATGCGGGCGACGGGCGAGCAGCG
TTGTTGCGGGTGCAAAGGAGGGGCTTCTCCCGGTTCTGCCTCCCATAACT
GGAGGAGCAGGGCTCTTTTCTGCACCGCCGTGGTGGCTTGCTTCTTGTCA
AGCACATGGACCGTTGCTGCCTGGGGCAGGCCTGTCATGCAGCCAGGCTT
CGTGTGTGGGGGTTCCGGGGCCTGGACGAGGCCATCGGCGACTGCCCGAC
GAGGAGCACGGAGGGCACGGACGGAAATTGGCATGATGGGTCGGTCGTCG
AGGCGCAGCGTGATGCGGGCGACGGGCGAGCAGCGTTGTTGCGGGTGCAA
AGGAGGGGCTTCTCCCGGTTCTGCCTCCCATAACTGGAGGAGCAGGGCTC
TTTTCTGCACCGCCGTGGTGGCTTGCTTCTTGTCAAGCACATGGACCGTT
GCTGCCTGGGGCAGGCCTGTCATGCAGCCAGGCTTCGTGTGTGGGGGTTC
CGGGGCCTGGACGAGGCCATCGGCGACTGCCCGACGAGGAGCACGGAGGG
CACGGACGGAAATTGGCATGGTCACCAGCGTACAACCCAGGCAGCAAACA
CGGCAAGTGGTGCTGCCGCCGCCGCCGCCGCCGCCGCCGGGGCAAGAGGG
GCCGGAGCTGCCGTGGCGGCAATCCGTGGCGGGGCCAGAGCACCCGCTGA
GCTACATGCCCTTCCTCGAGCACCTGCTCGGGGTGCTGGCACAGACCTTT
GAGCTGGAGGCCCTGCCGGTGCCGGAGGAGCTCTCGTTCGCCTCCAACGA
CGCGAAGAAGGCGCGCATCCTGAGCATGGCCTTCACCAGCCCGGAGATCC
GGCGCGTGCGCTTCACCTACTTTGACGCCGGGTCGAACGTGCAGGTGCTG
AACGCCGTAGTGTACCCGGACCCCTCCCTGGACATGCCCGTCCTCGGGGT
GGACCTGATCTCCTTCGGGAAGAAGCACCTGGCGGGCATCGACTTCCAGC
CCATCTTCGACGAGGAGGAGTACAAGGCCAGGTCACCAGCGTACAACCCA
GGCAGCAAACACGGCAAGTGGTGCTGCCGCCGCCGCCGCCGCCGCCGCCG
GGGCAAGAGGGGCCGGAGCTGCCGTGGCGGCAATCCGTGGCGGGGCCAGA
GCACCCGCTGAGCTACATGCCCTTCCTCGAGCACCTGCTCGGGGTGCTGG
CACAGACCTTTGAGCTGGAGGCCCTGCCGGTGCCGGAGGAGCTCTCGTTC
GCCTCCAACGACGCGAAGAAGGCGCGCATCCTGAGCATGGCCTTCACCAG
CCCGGAGATCCGGCGCGTGCGCTTCACCTACTTTGACGCCGGGTCGAACG
TGCAGGTGCTGAACGCCGTAGTGTACCCGGACCCCTCCCTGGACATGCCC
GTCCTCGGGGTGGACCTGATCTCCTTCGGGAAGAAGCACCTGGCGGGCAT
CGACTTCCAGCCCATCTTCGACGAGGAGGAGTACAAGGCCAGGCACGCCG
CGCCCCTGGCCCCCATCAAGGCCCGCTACCCGGAGTTTGCCCAGCAGATG
TCCCAGCGCTTCTACGACAGCGCGCGCTTCTTCAGCGAGGGCATGCTGTT
CGGCCGGTACGAGGACCCCTCGGTCATACAGGACCGGCTCTTCCCGGCCT
TCGCCGAGTACGTTTCAACGTACGTCGACGCCCTGCAGGCGGCGGCCGCC
CGGCCCCGGGGCGGCGGCCCCCCGCCGGTGAGCGGCTGGGACGCGCGGCC
CGCCTCCCGCGCCCGCGTTCTGGACCGGCAGCGGGCGTACGACCAGTACA
ACGCCGAGCGGGACCCGGCCCACGGTCTGTTTGTGAACTACTTTGGGCAG
GAGTGGTCGGACTCGTTCATGGACGACTTCCTCTTCCCGCTCAGCGTCAG
GCCCGAGGGGGGGTACCCCAAGGGCCCGCCGCCGGGGTGCGGGGGGCCCC
CGGGCCAGAGGAAGGGGCAGGAGGGGCAGGGGCAGCAGCAGGCGCAAGCG
GCCGCGGGGGCGCCAGGGCAGACCTGAGCACGCCGCGCCCCTGGCCCCCA
TCAAGGCCCGCTACCCGGAGTTTGCCCAGCAGATGTCCCAGCGCTTCTAC
GACAGCGCGCGCTTCTTCAGCGAGGGCATGCTGTTCGGCCGGTACGAGGA
CCCCTCGGTCATACAGGACCGGCTCTTCCCGGCCTTCGCCGAGTACGTTT
CAACGTACGTCGACGCCCTGCAGGCGGCGGCCGCCCGGCCCCGGGGCGGC
GGCCCCCCGCCGGTGAGCGGCTGGGACGCGCGGCCCGCCTCCCGCGCCCG
CGTTCTGGACCGGCAGCGGGCGTACGACCAGTACAACGCCGAGCGGGACC
CGGCCCACGGTCTGTTTGTGAACTACTTTGGGCAGGAGTGGTCGGACTCG
TTCATGGACGACTTCCTCTTCCCGCTCAGCGTCAGGCCCGAGGGGGGGTA
CCCCAAGGGCCCGCCGCCGGGGTGCGGGGGGCCCCCGGGCCAGAGGAAGG
GGCAGGAGGGGCAGGGGCAGCAGCAGGCGCAAGCGGCCGCGGGGGCGCCA
GGGCAGACCTGA
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