mRNA_S-ischiensis_contig10.1645.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A6H5KKA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA5_9PHAE) HSP 1 Score: 374 bits (960), Expect = 2.250e-122 Identity = 185/283 (65.37%), Postives = 225/283 (79.51%), Query Frame = 3
Query: 522 GQEGPELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTF-ELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGG 1367
G+EGP LPW S+AGPE PL+YMPF+EH+L VLA++F E+ ALP+ ++L+F N KKAR+LSM+F SPE+R+VR TYFDAG VQVLNAV+YPDPSLDMP+LG+DLISFG KHLAGIDFQP+FD + + R++ LAPIKA+YPEFAQ+MS RFYDSARFFSE MLFGRYED ++++++LFPAF EY+S Y+ L AA GG P P + +ARVLDR RAYDQYNAERDPAHGLF YFG+ +S+ FMD+FLF LS RPEGGYPKG G GG
Sbjct: 152 GKEGPHLPWTGSMAGPEFPLTYMPFMEHMLNVLARSFGEMTALPLADKLAFVENTDKKARMLSMSFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDNDSCRCRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVEEKLFPAFDEYLSLYISDLLKAAEE--GGNPSPEA--------QARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSEDFMDNFLFELSTRPEGGYPKGTARGGGG 424
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A835YZG6_9STRA (Ferredoxin-dependent bilin reductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG6_9STRA) HSP 1 Score: 304 bits (778), Expect = 1.240e-95 Identity = 159/276 (57.61%), Postives = 189/276 (68.48%), Query Frame = 3
Query: 540 LPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSF--ASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPK---GPP 1352
LPW +S AG EHPL YMPF+++ L L EL+ P+ EE++ + + AK RI S+ F P IR+ R TYFDAG VQV N VVYPDPS+D P+LGVDLI+FGKKHLAGIDFQP+ + Y R+ + L IKARYP+ +Q MS RFYDSARFFS MLF R+ED ++ +LFPAF+EY+S YV+ L A P VS P R VL+R AYDQYNAERDPAHGLFV YFG EWS+ FMDDFLF LS RPE GYPK GPP
Sbjct: 116 LPWIESCAGAEHPLLYMPFMDYSLEQLVSQLELQPTPMDEEMALQHSLHPAKPGRIASLLFNGPLIRKARLTYFDAGPAVQVFNMVVYPDPSIDAPILGVDLIAFGKKHLAGIDFQPLHADAGYADRYLSTLGDIKARYPDLSQTMSARFYDSARFFSPHMLFARFEDRDLVPSQLFPAFSEYLSEYVEMLSKA---------PRVS----TPEFRDAVLERHTAYDQYNAERDPAHGLFVQYFGHEWSEKFMDDFLFELSTRPEEGYPKVEHGPP 378
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: D8LGZ4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ4_ECTSI) HSP 1 Score: 297 bits (761), Expect = 7.110e-95 Identity = 149/227 (65.64%), Postives = 176/227 (77.53%), Query Frame = 3
Query: 687 KKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGG 1367
K A SM F SPE+R+VR TYFDAG VQVLNAV+YPDPSLDMP+LG+DLISFG KHLAGIDFQP+FD++ + R++ LAPIKA+YPEFAQ+MS RFYDSARFFSE MLFGRYED +++ ++LFPAF EY+S Y+ L AA GG P P + RARVLDR RAYDQYNAERDPAHGLF YFG+ +S++FMD+FLF L+ RP GGYPKG G GG
Sbjct: 36 KNACNTSMNFASPEVRKVRLTYFDAGDKVQVLNAVIYPDPSLDMPLLGIDLISFGGKHLAGIDFQPLFDDDSCRNRYSDKLAPIKAKYPEFAQKMSPRFYDSARFFSEEMLFGRYEDEAIVDEKLFPAFEEYLSLYISDLLKAAEE--GGNPSPEA--------RARVLDRHRAYDQYNAERDPAHGLFRTYFGEAYSENFMDNFLFELNTRPAGGYPKGAARGGGG 252
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A5J4YL15_PORPP (15,16-dihydrobiliverdin:ferredoxin oxidoreductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YL15_PORPP) HSP 1 Score: 232 bits (591), Expect = 1.020e-68 Identity = 119/262 (45.42%), Postives = 165/262 (62.98%), Query Frame = 3
Query: 537 ELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKHLAGI-DFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSV 1319
ELP+ +S+AG E L +MPF+ H V+ TF++ LP +EL+F S+ K ARI S + +PE R++R TY DAG QV N+V YPDP D+P+LG+D +SFGKK + I DFQP+ + Y ++ +PLAP+KA+Y A +MS +FYD FFS+ + FGR+++ + + LFPAF EY+ Y + +Q+A P S P A L RQ+ YDQY+AERDPA GLF YFG EW++ F +FLF SV
Sbjct: 65 ELPYERSIAGEEFELLFMPFVLHQNKVMRDTFQVSDLPFDDELAFQSSTKKAARIESWCYKTPEFRKIRSTYIDAGIQAQVFNSVWYPDPKYDLPLLGIDFLSFGKKKVICIMDFQPLTQDAAYLEKYISPLAPVKAKYKSLAGEMSAKFYDENVFFSKQLAFGRFDNAGPVMEELFPAFKEYLDVYFEHMQSAT---------PTSD----PEQIALNLQRQKDYDQYSAERDPAIGLFSTYFGPEWAEKFTHEFLFEHSV 313
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S2RIT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIT5_9STRA) HSP 1 Score: 230 bits (587), Expect = 3.330e-68 Identity = 126/265 (47.55%), Postives = 159/265 (60.00%), Query Frame = 3
Query: 543 PWRQSVAGPEHPLSYMPFLEHLLGVLAQTFELEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEE--EYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPE 1328
PW ++A L YM F H +L LP+ + LS A N K+ARI S + + R+VR TYFDAG+ VQV N++ YP D PVLGVDL+ FGKK LA ID QP+ D E EY A + P +K ++P +MS RFYD +FFS+GMLFGR+ED S I + PAF EY+ YVD ++ PR D + ARVL +Q AYDQY+AERDPAH LFV+YFG+EW+D +M DFLF LS PE
Sbjct: 61 PWTSTIASDGAALHYMDFYRHQEEILVGKLGATPLPLKDSLSGAVNHGKEARIASACYETDVFRKVRMTYFDAGNKVQVFNSLWYPRLEYDAPVLGVDLLCFGKKKILAVIDCQPLVDRENSEYHAEFSQPFLRVKEQFPSLCGKMSNRFYDENQFFSDGMLFGRFEDTSPIASEVLPAFQEYLQVYVDLVKDV---PR----------DTTDKATARVLAQQAAYDQYSAERDPAHALFVSYFGEEWADEYMSDFLFELSTPPE 312
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S4VTV3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTV3_9STRA) HSP 1 Score: 227 bits (579), Expect = 3.290e-66 Identity = 131/291 (45.02%), Postives = 175/291 (60.14%), Query Frame = 3
Query: 540 LPWRQSVAGP--EHPLSYMPFLEHLLGVLAQTF-ELEALPVPE-----ELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFDEEEYKARHAAP----LAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGYPKGPPPGCGGPP 1373
+PWR +V E+PL YMPF E + + +T L +P + SF N KKARI++ + S E R++R +Y+DAG N QV N+V YPDP ++PVLG+DL++F KK+LA +DFQP++D+E A HA L PIK Y +MS +FYD +FFS+ MLF R+ED V+ + LFPAF YV T+VD + + A D +P+S RV+ RQ+ YD Y+AERDPA GLF FG+ W+D F+ DFLF LS R EGG K PP GG P
Sbjct: 77 MPWRDTVGSTDKENPLLYMPFWEWQMEFMKETLTNLRVVPAKSSTSNLDFSFNDNKEKKARIVNHCYASDEYRKIRMSYYDAGDNTQVFNSVWYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLYDDE---AEHATTFEHLLRPIKDEYDSLKGRMSAKFYDETKFFSQQMLFARFEDEGVVIEDLFPAFQRYVKTHVDLVSSTEA-------------DTQPSSVERVMTRQQEYDTYSAERDPATGLFAAMFGKAWADEFVYDFLFSLSERAEGGL-KIPPMMGGGAP 350
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S3ENW0_9RHOD (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENW0_9RHOD) HSP 1 Score: 223 bits (568), Expect = 1.620e-65 Identity = 121/266 (45.49%), Postives = 163/266 (61.28%), Query Frame = 3
Query: 537 ELPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFE-LEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPE 1328
+LPW +S+AG + + +MPF+E V+ T + L+ LP ELSF S+ KKA+I S F S R++R TY DAG QV N+V YPDP D+P+LGVD +SFGKK L +DFQP+ E+ Y ++ L PIK++YP A QM+ RFYD +FFS+ + FGR+++P + + LFPAF EY++TYV + A A P A L+ Q+ YD Y+AERDPA GLF YFG EW+ F DFLF LS P+
Sbjct: 45 KLPWEKSIAGDDVEMLFMPFIELQNRVMFDTQKNLKDLPFESELSFQSSSRKKAKIESWNFQSDTFRKIRLTYIDAGIPAQVFNSVWYPDPKYDLPLLGVDFLSFGKKKILCVLDFQPLKQEKAYLEKYCEILDPIKSKYPSLAGQMTARFYDENQFFSKQLAFGRFDNPQPVMEELFPAFEEYLNTYVKMFKDAPATED-------------PKEIAANLELQKEYDIYSAERDPAVGLFSTYFGGEWAVKFTHDFLFELSETPD 297
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S0YZG3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YZG3_9CRYP) HSP 1 Score: 223 bits (567), Expect = 1.080e-64 Identity = 123/273 (45.05%), Postives = 166/273 (60.81%), Query Frame = 3
Query: 540 LPWRQSVAGPEHPLSYMPFLEHLLGVLAQTFE-LEALPVPEELSFASNDAKK--ARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFGKKH-LAGIDFQPIFDEEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSV---RPEGGY 1337
+PW +SV G EH L YMPF+E + + FE LE P E LSF KK A I S F + R++R TY DAG QV N V+YP+ D+P+LG+D +SFGK LA +D QP+ + +Y R+ PL PI+++Y + +MS +FYD ARFFS+ +LFG+++DPS + + LFPAF EY YV + GG + G D P + ARV Q+ YDQY+AE+DPA GLF Y+GQEW+D F +FLF SV + EGG+
Sbjct: 96 IPWTESVGGKEHKLLYMPFVEWQYKYMKENFETLEDKPFAEPLSFQRTPEKKPPAVIESWQFKTEHFRKIRMTYIDAGVRAQVYNCVIYPEYKYDLPILGIDFLSFGKSRVLAILDLQPLTQDPDYLERYIQPLRPIRSKYEDLCGRMSSKFYDEARFFSKELLFGKFDDPSPVMESLFPAFKEYFEHYVGMV---------GG---LEG-DESPEAIARVKQLQKDYDQYSAEKDPAVGLFATYWGQEWADRFTHEFLFSESVPVPKAEGGH 355
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A7S1Z3N6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3N6_TRICV) HSP 1 Score: 220 bits (561), Expect = 2.370e-63 Identity = 127/301 (42.19%), Postives = 180/301 (59.80%), Query Frame = 3
Query: 540 LPWRQSVAGPE--HPLSYMPFLEHLLGVLAQTFE----LEALPVPEELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFD-EEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRPEGGY---PKG------PPPGCGGPPGQRKGQ 1391
+PW +++ E +PL YMPF E + + +E + + N KKARI++ + S E R++R +Y+DAG + QV N+V YPDPS ++PVLG+DL++FG KK+LA +DFQP+++ EE++ A+ L PIK Y +MS +FYD +FFS+ MLF R+ED +V+ D L PAF YV ++ L++ V D+ + +A VL+RQRAYD Y+AERDPA GLF FG+EW++ F+ DFLF LS R EGG P G PP G G P G +GQ
Sbjct: 98 MPWVETIGSSEFENPLLYMPFWEWQMDFMGSELSNLRPIEHCDDGSDFGYNENSKKKARIVNHCYASDEYRKIRMSYYDAGDSTQVFNSVWYPDPSYNLPVLGIDLLAFGRKKYLAIVDFQPLYENEEDHAAKFEHILEPIKEEYDSLKGRMSAKFYDETKFFSKQMLFARFEDDNVVSDDLMPAFQRYVQAHLKLLKS------------VKPDDSLQSQKA-VLERQRAYDTYSAERDPAAGLFAAMFGKEWAEDFIFDFLFSLSERKEGGIQIPPMGMMGGGPPPQGXGAPQGAPQGQ 385
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Match: A0A1Z5JYB7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYB7_FISSO) HSP 1 Score: 213 bits (542), Expect = 7.080e-61 Identity = 120/272 (44.12%), Postives = 164/272 (60.29%), Query Frame = 3
Query: 540 LPWRQSVAGPEHP----LSYMPFLE-HLLGVLAQTFELEALPVPE---ELSFASNDAKKARILSMAFTSPEIRRVRFTYFDAGSNVQVLNAVVYPDPSLDMPVLGVDLISFG-KKHLAGIDFQPIFD-EEEYKARHAAPLAPIKARYPEFAQQMSQRFYDSARFFSEGMLFGRYEDPSVIQDRLFPAFAEYVSTYVDALQAAAARPRGGGPPPVSGWDARPASRARVLDRQRAYDQYNAERDPAHGLFVNYFGQEWSDSFMDDFLFPLSVRP 1325
+PW+ S+ P++P L YMPF E H+ + L +P + S+ N KKARI+S+ +S E R++R TY+DAG N QV NAV YPDP ++PVLG+DL++F KK+LA +DFQP+ + EE++ L PIK +Y +MS +FYD +FFS+ MLF R+ED S+I + LFPAF YV T++D ++ PV A VL RQ+AYD Y+AERDPA GLF FG EW+ F+ DFLF +S RP
Sbjct: 86 MPWKSSI-DPKYPEEEDLLYMPFWEWHMSFMKENLTNLRVMPCTNGKTDFSYNENIQKKARIVSLCASSSEYRKIRMTYYDAGENTQVYNAVFYPDPKYNLPVLGIDLLAFNRKKYLAIVDFQPLHENEEDHATTFEHRLQPIKEQYENLKGRMSSKFYDETQFFSQQMLFSRFEDESIISNELFPAFQSYVQTHLDLIREV---------DPVE------ADLDMVLKRQKAYDTYSAERDPATGLFTAMFGAEWAMDFVHDFLFSMSERP 341 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig10.1645.1 >prot_S-ischiensis_contig10.1645.1 ID=prot_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=427bp MGRSSRRSVMRATGEQRCCGCKGGASPGSASHNWRSRALFCTAVVACFLSback to top mRNA from alignment at S-ischiensis_contig10:3401599..3403616- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig10.1645.1 ID=mRNA_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2018bp|location=Sequence derived from alignment at S-ischiensis_contig10:3401599..3403616- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig10:3401599..3403616- >mRNA_S-ischiensis_contig10.1645.1 ID=mRNA_S-ischiensis_contig10.1645.1|Name=mRNA_S-ischiensis_contig10.1645.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2562bp|location=Sequence derived from alignment at S-ischiensis_contig10:3401599..3403616- (Schizocladia ischiensis KU_0333)back to top |