mRNA_S-ischiensis_contig1.1007.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: W7TFS2_9STRA (Ankyrin repeat-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFS2_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.910e-52 Identity = 91/197 (46.19%), Postives = 125/197 (63.45%), Query Frame = 3
Query: 366 GAAYRRPYTSRSKPSWADPFEKNEASPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWPRLP 956
GA +RP ++P+ NEASP+ FL +L ERGY T+ L + + R PTAKQ+TDY L +R+GDL L+ +GR+MDACN+FGES+VH++CR+G E LRFLL+NGG + DDLGR PLHD WA P F+ + +++ P L+ D RG TPL YI+R++W W+ F + K+ YW LP
Sbjct: 161 GAGCKRPRKKMTRPASEPALLNNEASPQDFLWGILQERGYETSPLLAKTQAFFRPPTAKQVTDYDIPLVTAVRTGDLGSLRDMAAAGRQMDACNRFGESIVHISCRRGQAETLRFLLENGGRVHMCDDLGRTPLHDACWAKVPVFDCVSAIMDQDPSLIRVVDCRGATPLSYIRREHWPEWREFFDSKKEKYWAPLP 357
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A6H5JAC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC0_9PHAE) HSP 1 Score: 175 bits (444), Expect = 3.250e-46 Identity = 97/233 (41.63%), Postives = 128/233 (54.94%), Query Frame = 3
Query: 444 PEAFLCSMLAERGY-PTAKLSSLGAGYMRAPTAKQLTDYAS--NLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPE------------------------------------------------------------LLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWPRL 953
P+A L ++L +RG P A +SS AGY PTAKQ+ DY + +LSGL R+GD+ GLQ+AV +GR+MDACNKFGESVVH+ACR+G+ LL FL+ NGGSL DDLGR PLH+V WA++PRF+++ + L E +LL D RGC+PLRY+K ++W AW+ FL V D +WP L
Sbjct: 138 PDAHLIALLKKRGRTPKAIVSSAEAGYSVPPTAKQIMDYDAQPHLSGLARTGDMEGLQRAVNAGRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHEVCWAAQPRFDIVRVFLEHERETNXXXXXXXXXXXXXXXATTVSGAXXXXSDGESTXXXXXXXXXXXXXXXXXXXNIVVDLNMLLVTDKRGCSPLRYVKEESWPAWRQFLDEVVDEFWPSL 370
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A835ZH90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH90_9STRA) HSP 1 Score: 163 bits (412), Expect = 6.390e-44 Identity = 79/171 (46.20%), Postives = 109/171 (63.74%), Query Frame = 3
Query: 441 SPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGG--SLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWP 947
+P FL + LA RGYPT + +L + Y PTAKQ+ DY+ +L +R+GDL L++ +G M+ACNKF ESVVH+A R G E++ F+++ G SL SDD GR PLHD W S P F+++ L+ E+LL D RG TPL Y+K++ W AW F+ +KD YWP
Sbjct: 3 NPHEFLIATLAARGYPTRTVVALESRYATKPTAKQVEDYSIDLVNAVRAGDLDTLREMHAAGCSMNACNKFAESVVHMAARIGAREVMEFMIECTGVESLAISDDYGRTPLHDACWTSEPFFDMVTFILDHEVEMLLVKDKRGFTPLLYVKKELWGAWHTFIDAIKDKYWP 173
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A6H5JNI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI0_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.570e-43 Identity = 83/176 (47.16%), Postives = 103/176 (58.52%), Query Frame = 3
Query: 429 KNEASPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWPRLP 956
K SP+A+L ++L ERGY + SS G PT KQL DY L +R D+ L+ G M A N+FGES+VHLA R+G +LRFLL +GGSL DD G+ PLHD W + PRFEL+ + L LL D RG TPLRY K ++W +W FL VKD WP LP
Sbjct: 93 KGVTSPQAYLEAILLERGYDSTPRSSASDGCRCTPTQKQLDDYQVPLVEAVRRWDMGALEALAADGVDMGASNRFGESIVHLATRRGSTPVLRFLLSHGGSLRICDDYGKTPLHDAFWTAEPRFELVAMMLEMDWGLLRATDVRGATPLRYAKNEHWASWCEFLDRVKDHLWPHLP 268
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A7S2RMJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMJ8_9STRA) HSP 1 Score: 160 bits (405), Expect = 6.990e-40 Identity = 71/171 (41.52%), Postives = 108/171 (63.16%), Query Frame = 3
Query: 432 NEASPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYW 944
++ +P+ F+ S+L RGY T ++ SL + PT KQ+ DY IR+ + A +Q GR M+ACNK+GESV+H+ACR+GD +L+ F+++ GG L +DD GR PLHD W P ++++ LNK LL D RG +PL Y++R+++D W F ++KDT+W
Sbjct: 279 DKKNPDQFVDSLLVSRGYETTRIPSLQTEFRTVPTPKQIQDYDLAFVDAIRTSNYAAIQSFYDEGRSMNACNKYGESVMHMACRRGDGKLVSFMVELGGLLEITDDYGRTPLHDACWTPEPCLDVVMFLLNKNLRLLHLIDKRGFSPLAYVRREHYDVWTSFFDSMKDTWW 449
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A835ZG28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG28_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.110e-39 Identity = 68/124 (54.84%), Postives = 88/124 (70.97%), Query Frame = 3
Query: 579 IRSGDLAGLQKAVQS-GRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWP 947
+R+G + L + V+ GR + ACNKFGES+ HLACRKG +++ +L++GGSL DDLGR+P HD W SRPR++++ LHL LLLT D RG TPLRY+KR NW AW+ FL VKD YWP
Sbjct: 5 VRNGSVQELLRLVEEEGRTLSACNKFGESLAHLACRKGSADVVATILRHGGSLTRCDDLGRVPAHDTCWESRPRWDIVQLHLEADAALLLTRDARGWTPLRYVKRANWAAWRAFLDAVKDRYWP 128
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: B7G9J4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9J4_PHATC) HSP 1 Score: 154 bits (390), Expect = 1.010e-37 Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 3
Query: 426 EKNEASPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWPRL 953
EK SP+++L M+A RGY T K +L Y PTA Q Y L L++ + L+ +SG + CN FGES++H+ CR+GD +LL+ LL+ G +L +DD GR PLHD WA++P F ++ L L + P LL +D RG PL Y+++++W W +L K TYWP L
Sbjct: 155 EKQAISPQSYLDDMIAARGYSTEKFKTLQTAYYNKPTALQQASYDVYLIDLVKKNGVETLRNIFKSGVSPNPCNTFGESLLHMICRRGDVDLLKVLLECGTNLQVADDYGRTPLHDACWAAKPAFAVVDLILERDPRLLYMSDCRGALPLSYVRKEHWCEWVPYLEARKHTYWPVL 330
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A7R9ZHX0_9STRA (Hypothetical protein n=6 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZHX0_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.000e-37 Identity = 80/178 (44.94%), Postives = 98/178 (55.06%), Query Frame = 3
Query: 432 NEASPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWPRLPVAA 965
N SP+ FL S+L RGY TA SL GY PT Q Y L +RS D L + SG + CN FGES+VH+ CR+GD LLR +L G +L SDD GR PLHD W + P FE + L L + LL D RG +PL Y K+++W W +L KDTYWP V A
Sbjct: 390 NMVSPQTFLDSLLKTRGYSTASYCSLETGYYSKPTPYQKASYGLALVRAVRSSDGPTLSSMLASGLSRNPCNAFGESLVHMVCRRGDHGLLRVMLDRGATLQVSDDFGRTPLHDACWTAEPSFECVDLILERDVRLLRILDCRGSSPLSYAKKEHWSEWIEYLERKKDTYWPARDVKA 567
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A7S2M5W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M5W4_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.090e-35 Identity = 69/169 (40.83%), Postives = 89/169 (52.66%), Query Frame = 3
Query: 441 SPEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAWKGFLATVKDTYWP 947
SP F + L RGYP SL GY PT Q + Y +L+ IRS D +Q + +G +ACNKFGES++H CR+GD ++LR L PLHD W + P FE + L L K P LL D RG TPL Y+++ +W W GFL + D YWP
Sbjct: 149 SPNDFFTAKLRSRGYPATTFCSLKGGYHSTPTTHQTSSYGISLTRAIRSSDKPQVQTLLSTGLNPNACNKFGESIIHAVCRRGDHDMLRILXXXXXXXXXXXXXXXXPLHDACWTASPNFETISLLLEKDPWLLSITDCRGSTPLGYVRKAHWAVWNGFLGAIIDRYWP 317
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Match: A0A7S0SWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWK6_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.510e-35 Identity = 65/155 (41.94%), Postives = 98/155 (63.23%), Query Frame = 3
Query: 444 PEAFLCSMLAERGYPTAKLSSLGAGYMRAPTAKQLTDYASNLSGLIRSGDLAGLQKAVQSGRKMDACNKFGESVVHLACRKGDPELLRFLLQNGGSLMCSDDLGRLPLHDVLWASRPRFELLLLHLNKRPELLLTADNRGCTPLRYIKRQNWDAW 908
P+ FL +L+ RGY + ++ + Y +AP+ KQ+ DY ++L IR DL+ L+ V G M ACN++ ES+VH+ACR+ DP ++ FLL+NGG +DD GR PLHD W PRF+++ + L+ LL AD RG PL Y+++++W W
Sbjct: 149 PDQFLLRLLSCRGYDYNLIPAVQSSYYKAPSEKQINDYTNDLINAIRYSDLSKLKALVDQGYSMSACNRYSESIVHMACRRSDPAVVDFLLKNGGDYYITDDFGRTPLHDACWRLDPRFDIVTMLLDNDLTLLRLADIRGSIPLCYVRQEHWAKW 303 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig1.1007.1 >prot_S-ischiensis_contig1.1007.1 ID=prot_S-ischiensis_contig1.1007.1|Name=mRNA_S-ischiensis_contig1.1007.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=238bp MRYPGGGPLGRKRCRPTVDRRQGAAYRRPYTSRSKPSWADPFEKNEASPEback to top mRNA from alignment at S-ischiensis_contig1:6965488..6967276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig1.1007.1 ID=mRNA_S-ischiensis_contig1.1007.1|Name=mRNA_S-ischiensis_contig1.1007.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1789bp|location=Sequence derived from alignment at S-ischiensis_contig1:6965488..6967276+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig1:6965488..6967276+ >mRNA_S-ischiensis_contig1.1007.1 ID=mRNA_S-ischiensis_contig1.1007.1|Name=mRNA_S-ischiensis_contig1.1007.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1428bp|location=Sequence derived from alignment at S-ischiensis_contig1:6965488..6967276+ (Schizocladia ischiensis KU_0333)back to top |