mRNA_S-dermatodea_contig10710.491.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5KDV1_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDV1_9PHAE) HSP 1 Score: 187 bits (476), Expect = 4.320e-49 Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
KSVEERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ ISQPF GLEKRQCT+Q GPG + + ++IFRG G RIS VE AAY K V VFFQ+ AWAD +FC WAKR YR+GL+ G
Sbjct: 318 KSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRG 486
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JKG3_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG3_9PHAE) HSP 1 Score: 187 bits (476), Expect = 4.680e-49 Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
KSVEERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ ISQPF GLEKRQCT+Q GPG + + ++IFRG G RIS VE AAY K V VFFQ+ AWAD +FC WAKR YR+GL+ G
Sbjct: 250 KSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRG 418
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5KH13_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH13_9PHAE) HSP 1 Score: 183 bits (464), Expect = 5.450e-49 Identity = 95/169 (56.21%), Postives = 114/169 (67.46%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
KSVEERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ +SQPF GL KR+CT+Q GPG + + ++IFRG G RIS VE AAY K V VFFQ+ AWAD +FC WAKR YR+GL+ G
Sbjct: 88 KSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAVSQPFAGLGKRKCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRG 256
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5KZ92_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ92_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.400e-48 Identity = 97/169 (57.40%), Postives = 113/169 (66.86%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
KSVEERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ ISQPF GLEKRQCT+Q GPG + + +I RG G RIS VE AAY K V VFFQ+ AWAD +FC WAKR YR+GL+ G
Sbjct: 278 KSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRILVILRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRG 446
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE) HSP 1 Score: 187 bits (476), Expect = 2.850e-48 Identity = 98/169 (57.99%), Postives = 115/169 (68.05%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
KSVEERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ ISQPF GLEKRQCT+Q GPG + + ++IFRG G RIS VE AAY K V VFFQ+ AWAD +FC WAKR YR+GL+ G
Sbjct: 432 KSVEERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRQCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENAWADQKFCMEWAKRSYREGLIRGRG 600
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 186 bits (473), Expect = 1.130e-47 Identity = 135/334 (40.42%), Postives = 168/334 (50.30%), Query Frame = 2
Query: 359 LAASRRSCTSREKASAIMQLRELESWSLEAWEWHGMSPLQYSSLKTGVPNANTSKWQNERRTFRQGGDKG-GDEWPDEKDAKQRLVSEGGGGVVSDVPASTPEEEAQGIR--RCGCRSHSANCF*RTGRTMRERAGFRGLSSLGQTSGPISTTCLVGEIATQTTKSVEERLPKIREFHKRFRQLLNEPRR-EEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
LA+ R S REK S + QLRELES + E ++PL Y S KTG+ AN SKWQ E + K + D K +R E + + ++ R R A + R RA +R + + + KS EERLPKI + KR+R+LL EPRR V P A+ K+GRF ER N DQV V GQ + G +R+ I QPFPGLEKRQCTVQP GPGG+V+ CA+IFRG G ISKVE AAYDK V VFFQ AWAD FC W +RC+R L+AA+G
Sbjct: 1327 LASPRGSYDPREKLSVVEQLRELESRAQEVRAHFNLTPLGYLSNKTGIAVANISKWQREEEKLLEVAAKSVKKKLFDTKSRPKRWFPEAEQALYTMYRERRKKKVRVSTRWLTVTFRKLLAEKYPEDPRAKTFRASYRWAQKWAHRH-----SLSMRRKSNGKNKSSEERLPKINAWLKRYRELLREPRRCGGELVPWPQQVPQEASGDLQAHHKWGRFLPDERLNTDQVPTGFVNGQVDSWEQTGARRVHIMQPFPGLEKRQCTVQPTFGPGGKVMKCAIIFRGKGTGISKVEKAAYDKRVDVFFQPKAWADDNFCMQWLERCFRPSLMAASG 1655
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ4_9PHAE) HSP 1 Score: 179 bits (455), Expect = 2.170e-46 Identity = 127/329 (38.60%), Postives = 166/329 (50.46%), Query Frame = 2
Query: 362 AASRRSCTSREKASAIMQLRELESWSLEAWEWHGMSPLQYSSLKTGVPNANTSKWQNERRTFRQGGDKGGDEWPDEKDAKQRLVSEGGGGVVSDVPASTPEEEAQGIRRCGCRSHSANCF*RTGRTMRERAGFRGLSSLGQTSGPISTTCLVGEIATQTTKSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
A RR R KA+A+ QLR LE + W+ +PLQY V +N KW + + ++ P K ++ +E + E + ++ +A F + R R+ A LS +T+ K+VEERLPKI+ FH+ FR+LL EP R A S A+R R PKYG+F L ERWNVDQV LA V G T +R KR+ ISQPFPGLEKRQCTV GPG + ++IFRG+G RIS VE AAY + V VFFQ+ AWAD + C WAKR Y +GL+ G
Sbjct: 121 APKRRRYDYRFKANAVSQLRILEGNAAYLWKKEERTPLQYLEDGLKVHYSNIVKWTKDEKAIVAAAADDANKSPLAKQQPKQWFAE----AQKRLYKMFVERRKRKLKMYPGDQRAA-AFSASFRWARKWAKRHNLSKRRRTN--------------LKNKTVEERLPKIQRFHRLFRKLLQEPVRYRAPDELDLSAITTFAERESRVPKYGQFLLWERWNVDQVPLAFVNGLLDTWEERVAKRVAISQPFPGLEKRQCTVLVIFGPGETTLRISVIFRGMGKRISPVEKAAYHEDVDVFFQENAWADQKICMEWAKRSYLEGLMRGRG 430
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE) HSP 1 Score: 177 bits (449), Expect = 1.060e-44 Identity = 94/170 (55.29%), Postives = 114/170 (67.06%), Query Frame = 2
Query: 839 TKSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
+KSV+ERLPKI+ FH+RFR+LL EP R A + S + A+ RDPKYG+FQL ERWNVDQV L V G ST G R+ ISQPF GLEKR+CT+Q GPG + + ++IFRG G RIS VE AAY K V VFFQ+ A A +FC WAKR YR+GL+ G
Sbjct: 718 SKSVKERLPKIQRFHRRFRKLLQEPVRYRAPEASDVSAMSTVAEGESRDPKYGQFQLWERWNVDQVPLPFVNGLISTWEKTGALRVAISQPFAGLEKRKCTMQVIFGPGEKTMRISVIFRGQGKRISPVEKAAYHKDVDVFFQENALAHQKFCMEWAKRSYREGLIRGRG 887
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JV77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV77_9PHAE) HSP 1 Score: 174 bits (440), Expect = 4.440e-44 Identity = 127/335 (37.91%), Postives = 166/335 (49.55%), Query Frame = 2
Query: 362 AASRRSCTSREKASAIMQLRELESWSLEAWEWHGMSPLQYSSLKTGVPNANTSKWQNERRTFRQGGDKGGDEWPDEKDAKQRLVSEGGGGVVSDVPASTPEEEAQGIRRCGCRSHSANCF*RTGRTMRERAGFRGLSSLGQTSGPISTTCLVGEI------ATQTTKSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLLAANG 1348
A RR R KA A+ QLR + + + W+ +PLQ+ + +P +N KW K+ K+ + G S + P+ G + R + G R + + L +L T I+ LV E+ A + S RLPKI+ FH+ FR+LL EP R A + S A+R R PKYG+FQL ERWNVDQV+LA V G T RG R+ ISQPF GLEKRQCT+Q GPG + + +IFRG G RIS VE AAY + V VFFQ AWAD +FC AKR YR+GL+ G
Sbjct: 273 APKRRRYDFRFKAHAVNQLRIFQDNAEDLWKEEQRTPLQFLEGRLKIPYSNIVKWA--------------------KNEKELVAVAADGVKKSLLAKQQPQRSFPGAEK---RLYK-------GFVERRKRKLK-LPTLWLT---ITFRKLVREMYPGDQRAASSRASFRRRLPKIQRFHRLFRKLLQEPVRYRAPDESDVSAVTTVAERESRVPKYGQFQLWERWNVDQVSLAFVNGLLETWDKRGALRVAISQPFAGLEKRQCTMQVTFGPGEKTMRILVIFRGTGKRISPVEKAAYHEDVDVFFQDNAWADQKFCMERAKRSYREGLMRGRG 573
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Match: A0A6H5JXZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ1_9PHAE) HSP 1 Score: 171 bits (434), Expect = 5.730e-43 Identity = 91/165 (55.15%), Postives = 109/165 (66.06%), Query Frame = 2
Query: 842 KSVEERLPKIREFHKRFRQLLNEPRREEAAVTASASPPAVAAQRPVRDPKYGRFQLAERWNVDQVALALVTGQGSTLADRGNKRIVISQPFPGLEKRQCTVQPCIGPGGRVILCALIFRGLGLRISKVELAAYDKHVVVFFQKCAWADVEFCTAWAKRCYRKGLL 1336
K VEERLPKI+ FH+ FR LL EP R A + S A+R R PK G+FQL ERWNVDQV LA V G T +RG + ISQPFPGLEKRQ TVQ +GPG + + ++IFRG G RIS VE AAY K V +FF++ AW D +FC WAKR YR+ L+
Sbjct: 268 KFVEERLPKIQRFHRLFRMLLQEPVRYRAPDESDVSAITTVAERESRVPKNGQFQLWERWNVDQVPLAFVNGLLDTWEERGANDVAISQPFPGLEKRQFTVQVILGPGEKTLRISVIFRGTGKRISPVEKAAYHKDVDLFFEENAWTDQKFCMEWAKRSYRESLM 432 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10710.491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10710.491.1 >prot_S-dermatodea_contig10710.491.1 ID=prot_S-dermatodea_contig10710.491.1|Name=mRNA_S-dermatodea_contig10710.491.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=108bp MQDLGVHQRVHHPNPDRSAGVRPRRALMSSGVTTVPLPWDGNPIGRCWKVback to top mRNA from alignment at S-dermatodea_contig10710:5956..7339+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10710.491.1 ID=mRNA_S-dermatodea_contig10710.491.1|Name=mRNA_S-dermatodea_contig10710.491.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1384bp|location=Sequence derived from alignment at S-dermatodea_contig10710:5956..7339+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10710:5956..7339+ >mRNA_S-dermatodea_contig10710.491.1 ID=mRNA_S-dermatodea_contig10710.491.1|Name=mRNA_S-dermatodea_contig10710.491.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=648bp|location=Sequence derived from alignment at S-dermatodea_contig10710:5956..7339+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |