prot_S-dermatodea_contig1066.462.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig1066.462.1
Unique Name	prot_S-dermatodea_contig1066.462.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	95

Homology

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 6.230e-57
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 92
            M VLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLV+V
Sbjct:   38 MNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDV 129

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.300e-55
Identity = 87/92 (94.57%), Postives = 89/92 (96.74%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 92
            M+ LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKT+IFDFLV V
Sbjct:   19 METLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHV 110

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.150e-55
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 92
            M VLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AI+KTEIFDFLV+V
Sbjct:   40 MDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDV 131

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.640e-53
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 92
            M  L IGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AIR+TEIFDFLV+V
Sbjct:   54 MDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDV 145

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC)

HSP 1 Score: 168 bits (425), Expect = 4.550e-52
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 94
            M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct:   37 MEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 130

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.550e-52
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 94
            M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct:   37 MEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 130

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI)

HSP 1 Score: 168 bits (425), Expect = 5.500e-52
Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLV 90
            M  LEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+AAI+ TEIFDFLV
Sbjct:   42 MNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD)

HSP 1 Score: 168 bits (425), Expect = 5.860e-52
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 94
            M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct:   45 MEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 138

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK)

HSP 1 Score: 166 bits (421), Expect = 1.040e-50
Identity = 80/92 (86.96%), Postives = 88/92 (95.65%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 92
            M+ L+IGTEQDFKNHNDLPL RIKRIMKSDEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQ +IRKTEIFDFLV+V
Sbjct:   92 MEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDV 183

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BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A5D6Y0M5_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0M5_9STRA)

HSP 1 Score: 168 bits (425), Expect = 6.330e-50
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 0

Query:    1 MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 94
            M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct:  203 MEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 296

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYP7_ECTSI	6.230e-57	97.83	CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec...	[more]
D7FYP6_ECTSI	2.300e-55	94.57	CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ec...	[more]
A0A7S2DIM4_9STRA	3.150e-55	94.57	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2SRM6_9STRA	1.640e-53	92.39	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A067D1Y5_SAPPC	4.550e-52	88.30	CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa...	[more]
W4HC48_9STRA	4.550e-52	88.30	CBFD_NFYB_HMF domain-containing protein n=3 Tax=Sa...	[more]
A0A812R7W0_SYMMI	5.500e-52	92.22	NFYC2 protein n=1 Tax=Symbiodinium microadriaticum...	[more]
K3WAN7_GLOUD	5.860e-52	88.30	CBFD_NFYB_HMF domain-containing protein n=25 Tax=O...	[more]
A0A6V1P6K4_HETAK	1.040e-50	86.96	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A5D6Y0M5_9STRA	6.330e-50	88.30	CBFD_NFYB_HMF domain-containing protein n=1 Tax=Py...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 18..80 e-value: 4.3E-23 score: 81.4
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 1..93 e-value: 4.2E-36 score: 125.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 14..89
None	No IPR available	PANTHER	PTHR10252:SF39	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4-RELATED	coord: 2..92
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 2..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig1066	contig	S-dermatodea_contig1066:603..1232 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig1066.462.1	mRNA_S-dermatodea_contig1066.462.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig1066 600..1232 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig1066.462.1 ID=prot_S-dermatodea_contig1066.462.1|Name=mRNA_S-dermatodea_contig1066.462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=95bp
MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEM
FILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003958	CBFA_NFYB_domain
IPR009072	Histone-fold