mRNA_S-dermatodea_contig1066.462.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: D7FYP7_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP7_ECTSI) HSP 1 Score: 180 bits (456), Expect = 9.230e-57 Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 279
+M VLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLV+V
Sbjct: 37 EMNVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVDV 129
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: D7FYP6_ECTSI (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYP6_ECTSI) HSP 1 Score: 175 bits (444), Expect = 3.410e-55 Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 279
+M+ LEIGTEQDFKNHNDLPLARIKRIMK DEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKT+IFDFLV V
Sbjct: 18 EMETLEIGTEQDFKNHNDLPLARIKRIMKCDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTDIFDFLVHV 110
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A7S2DIM4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIM4_9STRA) HSP 1 Score: 176 bits (445), Expect = 4.670e-55 Identity = 87/93 (93.55%), Postives = 91/93 (97.85%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 279
+M VLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AI+KTEIFDFLV+V
Sbjct: 39 EMDVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIKKTEIFDFLVDV 131
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A7S2SRM6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM6_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.430e-53 Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 279
+M L IGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSE+NKRRTLQKEDIQ AIR+TEIFDFLV+V
Sbjct: 53 EMDTLAIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEQNKRRTLQKEDIQTAIRRTEIFDFLVDV 145
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A067D1Y5_SAPPC (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1Y5_SAPPC) HSP 1 Score: 167 bits (424), Expect = 6.740e-52 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 285
+M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct: 36 EMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 130
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: W4HC48_9STRA (CBFD_NFYB_HMF domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=W4HC48_9STRA) HSP 1 Score: 167 bits (424), Expect = 6.740e-52 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 285
+M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct: 36 EMEKLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 130
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A812R7W0_SYMMI (NFYC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R7W0_SYMMI) HSP 1 Score: 167 bits (424), Expect = 8.140e-52 Identity = 83/91 (91.21%), Postives = 87/91 (95.60%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLV 273
+M LEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEK KRRTLQK+DI+AAI+ TEIFDFLV
Sbjct: 41 EMNALEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKMKRRTLQKDDIEAAIKNTEIFDFLV 131
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: K3WAN7_GLOUD (CBFD_NFYB_HMF domain-containing protein n=25 Tax=Oomycota TaxID=4762 RepID=K3WAN7_GLOUD) HSP 1 Score: 167 bits (424), Expect = 8.670e-52 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 285
+M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct: 44 EMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 138
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A6V1P6K4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6K4_HETAK) HSP 1 Score: 166 bits (420), Expect = 1.530e-50 Identity = 80/93 (86.02%), Postives = 89/93 (95.70%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEV 279
+M+ L+IGTEQDFKNHNDLPL RIKRIMKSDEDVRMI+AEAP+LFAKA EMFILE+TLRSWCYSE+NKRRTLQKEDIQ +IRKTEIFDFLV+V
Sbjct: 91 EMEALQIGTEQDFKNHNDLPLMRIKRIMKSDEDVRMIAAEAPILFAKATEMFILEITLRSWCYSERNKRRTLQKEDIQTSIRKTEIFDFLVDV 183
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Match: A0A5D6Y0M5_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0M5_9STRA) HSP 1 Score: 167 bits (424), Expect = 9.330e-50 Identity = 83/95 (87.37%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 1 QMQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWCYSEKNKRRTLQKEDIQAAIRKTEIFDFLVEVFH 285
+M+ LE+G+EQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSW YSEKNKRRTLQKEDIQ AIR T+IFDFLV+V +
Sbjct: 202 EMEQLEVGSEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMFILELTLRSWGYSEKNKRRTLQKEDIQTAIRNTDIFDFLVDVIN 296 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1066.462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig1066.462.1 >prot_S-dermatodea_contig1066.462.1 ID=prot_S-dermatodea_contig1066.462.1|Name=mRNA_S-dermatodea_contig1066.462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=95bp MQVLEIGTEQDFKNHNDLPLARIKRIMKSDEDVRMISAEAPVLFAKACEMback to top mRNA from alignment at S-dermatodea_contig1066:600..1232+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig1066.462.1 ID=mRNA_S-dermatodea_contig1066.462.1|Name=mRNA_S-dermatodea_contig1066.462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=633bp|location=Sequence derived from alignment at S-dermatodea_contig1066:600..1232+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig1066:600..1232+ >mRNA_S-dermatodea_contig1066.462.1 ID=mRNA_S-dermatodea_contig1066.462.1|Name=mRNA_S-dermatodea_contig1066.462.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at S-dermatodea_contig1066:600..1232+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |