prot_S-dermatodea_contig10619.430.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10619.430.1
Unique Nameprot_S-dermatodea_contig10619.430.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length232
Homology
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BLAST of mRNA_S-dermatodea_contig10619.430.1 vs. uniprot
Match: A0A6H5LC46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC46_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 5.770e-45
Identity = 113/232 (48.71%), Postives = 129/232 (55.60%), Query Frame = 0 
Query:    1 QIRARYDGDEARLLSGEFPFRLAPTPSGKDAPGSARHPTGGGG------GGFSRRDHGDPRTRCSVAIDVTILSSSAERGXXXXXXXXXXXXXXXXXERD----GGSAGLVRFPCLVHAVVDVSARPTGGRRAR---------APDDAGRSSSSLER--LRLLEGYTADALFKQDTRRALDVYPGSQLRIYDPCCA---SHAGAEG--ETTLLMCTQLCEPYPSCLPPLTAP 206
            Q+RAR DGDEARLLSGEFPFR   + S     G+      G G      G  SRRD+GDPRTRCSVA+D T++  +A                    E      GG++GLV F C VH VVDVS    GG R R         A D AG SS + +   L  LEG   D LFKQDTRRA+DV PGSQLRIYDP C    +  G EG     LL+CTQLCEPYPSCLP L +P
Sbjct:  393 QVRARCDGDEARLLSGEFPFRQPSSASKSTTGGNNNSHLDGVGVXXXXSGAKSRRDYGDPRTRCSVALDATVMLPAATPRGSSVGFEGGLWGGGEGNELGQAGRGGASGLVWFSCFVHHVVDVSLG-LGGNRVRPGSRCATSAAGDAAGWSSVATDFGCLHRLEGVRVDGLFKQDTRRAVDVGPGSQLRIYDPSCVWYDAEVGGEGGRAEALLVCTQLCEPYPSCLPALPSP 623
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BLAST of mRNA_S-dermatodea_contig10619.430.1 vs. uniprot
Match: D7FXF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF5_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.740e-31
Identity = 94/205 (45.85%), Postives = 107/205 (52.20%), Query Frame = 0 
Query:    1 QIRARYDGDEARLLSGEFPFRLAPTPSGKDAPGSARHPTG-----GGG----GGFSRRDHGDPRTRCSVAIDVTILSSSAERGXXXXXXXXXXXXXXXXXERD----GGSAGLVRFPCLVHAVVDVSARPTGGRRA----RAPDDAGRSS------SSLERLRLLEGYTADALFKQDTRRALDVYPGSQLRIYDPCCASHAGAEG 182
            Q+RAR DGDEARLLSGEFPFR   + S   A  S     G     G G    GG SRRD GDPRTRC VA+D T++  +A                    E      GG  GLVRF C VH VVDVS    G R +    R     G ++      +   RL  LEG   D +FKQDTRRA+DV PGSQLRIYDPCC  +  AEG
Sbjct: 1028 QVRARCDGDEARLLSGEFPFRQPSSAS--KATTSXXXXXGHLDDVGVGXXXXGGKSRRDPGDPRTRCRVALDATVMLPAATPRGPSVGFEGGLWGGGEGNELGQAGGGGVTGLVRFSCFVHHVVDVSLSLGGSRVSPGSRRVTSAVGYAAGPSGVATDFGRLHRLEGVRVDGIFKQDTRRAVDVGPGSQLRIYDPCCVWY-DAEG 1229
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10619.430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LC46_9PHAE5.770e-4548.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF5_ECTSI2.740e-3145.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10619contigS-dermatodea_contig10619:88..783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10619.430.1mRNA_S-dermatodea_contig10619.430.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10619 88..1191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10619.430.1 ID=prot_S-dermatodea_contig10619.430.1|Name=mRNA_S-dermatodea_contig10619.430.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=232bp
QIRARYDGDEARLLSGEFPFRLAPTPSGKDAPGSARHPTGGGGGGFSRRD
HGDPRTRCSVAIDVTILSSSAERGGAQSSSAVGAGGGAGGGERDGGSAGL
VRFPCLVHAVVDVSARPTGGRRARAPDDAGRSSSSLERLRLLEGYTADAL
FKQDTRRALDVYPGSQLRIYDPCCASHAGAEGETTLLMCTQLCEPYPSCL
PPLTAPDASRALDCQQHDASVDAPRLGVDDR*
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