prot_S-dermatodea_contig10592.413.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10592.413.1
Unique Nameprot_S-dermatodea_contig10592.413.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length528
Homology
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.980e-183
Identity = 390/596 (65.44%), Postives = 420/596 (70.47%), Query Frame = 0
Query:    2 GRELLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQATIHAAIHG--GLGLRVNTPESLGPHGGAGYFSXXXXXXXXARSTGGLS--------------------------------PLEGMGGGAASGAGMQMLPTHVSEFR-PMDVPEYRSVGSWQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EIETLSFGSIGARTPVSSAAGSPRVGASYNTSPALSGTASTPGGDWSLFSGGFRLGVNALQEDSSC---SSTPTTARATPRVHFPEGLQALSGND--VAGAEGGDA---QGDDGEDQKETAD-DAGKXXXXXXXXXXXAGAHAPPPSPASTTSGEPSRKVRG-PLAGAYAVDALE--SGDGEDSETEG-----------------EDIADKVARLGKRLQAMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGNRGGL--NHT 525
            GRE+LGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNG TIKDMKHKTGCNMWVDQRALKLTITGPDL SVEHAAKSVDAYVAAAPIKAGAVEAAVTKT+ECPP LLD LGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAY SV+A IH A+HG  GLGLRV+TP+S G  G  G   XXXXXXXX    G +S                                P    G G +S A   +      ++R   D  E+  + +WQQ+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      EIET+S GSIGARTPVSS AGSPRV  SYNTSPALSGTASTP GDWSLFSGGF +G+ ALQE  S    SSTPTTAR TPRVHFPEGL+AL G     + A  GD    +G         AD ++G XXXXXXXXXXX        SPA T  GE SR++ G P+  A  + ALE  + DGE+                      EDI+DKVARLGK LQ MGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVG R     NH 
Sbjct:   39 GREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMRSPLVSGAVAXXXXGMHHLMLPSTAGGAGGSSHADPDLHHLAAPDYRHARDTAEFHHLATWQQEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGAGRASAASAGDLAVLKGSGLLSPASAADGNSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEEXXXXXXXXXXXXXXXXXXXXXXEDISDKVARLGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGARAAAATNHA 634          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.140e-74
Identity = 123/150 (82.00%), Postives = 136/150 (90.67%), Query Frame = 0
Query:   16 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQATIHAA 165
            YSIKRCQGFVRCDMDIDAEVVGWVIGK+G TIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAKSV+AYVAAAPIKAGAVEAAVT++L+CPPHLLDVLGDR TIARIVKET AQVVVNKK+ R+IVRG   +V +A   VQA I AA
Sbjct:   42 YSIKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.490e-70
Identity = 118/150 (78.67%), Postives = 135/150 (90.00%), Query Frame = 0
Query:   16 YSIKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQATIHAA 165
            YSIKRCQGF+RCDMDIDAEVVGWVIG+NG TIKD+K+KTGCNMWVDQRALKLTITGPD+ +VEHAAK V+AYVAAAPIKAGAVEAAVT++LECPPHLLD+LGDR TIARIVKET AQVVVNKK+ R+I+RG+  +V +A   +Q  I AA
Sbjct:   57 YSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAA 206          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 2.060e-29
Identity = 175/537 (32.59%), Postives = 239/537 (44.51%), Query Frame = 0
Query:   18 IKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQATI---HAAIHG-GLGLRVNTPESLG-PHGGAGYFSXXXXXXXX-----ARSTGGLSPLEGMGGGAASGAGMQMLPTHVSEFRPMDVPEYRSVGS--------------WQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIETLSF--------GSIGARTPVSSAAGSPRVGA-SYNTSPALSGTASTPGGDWSLFSGGFRLGVNALQEDSSCSSTPTTARATPRVHFPEGLQALSGNDVAGAEGGDAQGDDGEDQKETADDAGKXXXXXXXXXXXAGAHAPPPSPASTTSGEPSRKVRGPLAGAYAVDALESGDGEDSETEGEDIADKVARLGKRLQAMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAV 516
            ++R  GFVRC MDI  EVVGWVIG++G  IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  +ECPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L    ++  I    +A HG GLG  V  P  L  P G AG                 RSTG       M  G A G  M   P  +      D     S G                ++Q        XXXXXXXXXXXXXXXXXX     E +   F        G +G     S+A+G  R G+ S   +P L G  S   G W++      +G   ++   +       A   P +    G    +G  VAGA                                    ++   +    + G+ SR+   P                     G  + +  A L + L  MGLG+Y     ENE+DLEA+ LM++SD  DIGIPKGPR+K+L A+
Sbjct:   25 LERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAGLGGAV-PPNFLDFPAGVAGMAEFMDDGGGGLDSFTVRSTGPPGQQPFMNPGEAGGVRMGSSPLSIPGSG--DPGSNLSAGGAGFPVVGGAPYDEELRKQQLRGSPASXXXXXXXXXXXXXXXXXXRPAKMEADVAGFNGKEMDCGGMLGHN---SAASGGSRTGSISSGGTPPLVGR-SLSMGSWNV------MGAPPIRVVDTAGGXXXXA---PPLRL--GNSPATGLSVAGA---------------------------LMNMNRLSINSDDSNGGGRSIGQASRQRERP---------------------GTPVGNP-ADLAEFLGDMGLGQYAQALTENEIDLEAVQLMADSDFQDIGIPKGPRVKLLYAL 494          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.360e-23
Identity = 60/127 (47.24%), Postives = 88/127 (69.29%), Query Frame = 0
Query:   18 IKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKI 139
            +++  GFVRC +DI  EVVGWVIG++G  IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +  V++ ++CPPHL+ +L  R  +TI RI +E+ A VV+N+K+
Sbjct:  292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.730e-18
Identity = 59/161 (36.65%), Postives = 87/161 (54.04%), Query Frame = 0
Query:   34 EVVGWVIGKNGDTIKDMKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPI---------------------------------KAGAVEAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQ 159
            EVVGWVIG++G  IK+MKH++GC MWVDQ+ LKL ITG D+  +  AA  V   ++  P                                   AG  +  V++ ++CPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV LA   ++
Sbjct:  318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIE 478          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 4.020e-14
Identity = 50/127 (39.37%), Postives = 77/127 (60.63%), Query Frame = 0
Query:   50 MKHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLECPPHLLDVLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYTSVQATI---HAAIHG 168
            ++H++GC MWVDQ+ LKL ITG D+  +  AA  V   ++ AP+    AG  +   +  +ECPPHL+ +L  R  +TI RI +E+ A VV+N+K+ ++IV G  +SV L    ++  I    +A HG
Sbjct:   59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHG 185          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ)

HSP 1 Score: 62.4 bits (150), Expect = 1.110e-7
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  469 LQAMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAV 516
            L  +GL KY   FAENE+DL+A+GL+SE D  ++G+P GPR K+L AV
Sbjct:    9 LDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAV 56          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A813JZV9_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JZV9_POLGL)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-7
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  469 LQAMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAV 516
            +Q +GL ++ P F   EVDL+AL L  E DL D+G+PKGPR+K+L AV
Sbjct:    5 MQQIGLERFIPAFQAEEVDLDALSLFEEKDLQDLGLPKGPRVKLLRAV 52          
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Match: A0A6J1WLS7_GALME (Usher syndrome type-1G protein-like n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WLS7_GALME)

HSP 1 Score: 62.8 bits (151), Expect = 1.210e-7
Identity = 41/106 (38.68%), Postives = 56/106 (52.83%), Query Frame = 0
Query:  418 PASTTSGEPSRKVRGPLAGAYAVDALESGDGEDS----ETEGEDIADKVARLGKRLQAMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGNR 519
            PA T   + S    G LA  +A    E    E S    + EGE      A L + L A GLG+Y  KF + ++DL+AL L++ESDL  +G+P GP  K++ AV  R
Sbjct:   83 PAGTAGEDLSIGSAGSLAARHAYQPAEWNQSESSTVSSDEEGEAEESGYASLERFLTAWGLGQYVQKFKDEQIDLDALMLLTESDLKSLGLPLGPYRKLVTAVQER 188          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10592.413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB1_ECTSI1.980e-18365.44SAM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZGS8_9STRA1.140e-7482.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YT56_9STRA1.490e-7078.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FHT5_ECTSI2.060e-2932.59SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YRS0_9STRA1.360e-2347.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJQ9_9STRA8.730e-1836.65SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JET1_9PHAE4.020e-1439.37SAM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A382VC15_9ZZZZ1.110e-756.25Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A813JZV9_POLGL1.120e-754.17Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A6J1WLS7_GALME1.210e-738.68Usher syndrome type-1G protein-like n=1 Tax=Galler... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 100..163
e-value: 61.0
score: 0.3
coord: 23..89
e-value: 2.6E-7
score: 40.3
IPR001660Sterile alpha motif domainSMARTSM00454SAM_4coord: 462..522
e-value: 8.0E-5
score: 32.0
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 469..516
e-value: 3.3E-11
score: 43.4
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 469..504
score: 9.049
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 28..84
e-value: 1.7E-9
score: 37.3
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 456..525
e-value: 1.5E-16
score: 62.0
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 465..516
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 25..89
e-value: 2.7E-11
score: 45.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 24..91
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 27..282
NoneNo IPR availablePANTHERPTHR10288:SF145P-ELEMENT SOMATIC INHIBITOR, ISOFORM Ccoord: 27..282
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 24..84
score: 12.433

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10592contigS-dermatodea_contig10592:1643..5949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10592.413.1mRNA_S-dermatodea_contig10592.413.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10592 1643..5964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10592.413.1 ID=prot_S-dermatodea_contig10592.413.1|Name=mRNA_S-dermatodea_contig10592.413.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=528bp
MGRELLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGDTIKDM
KHKTGCNMWVDQRALKLTITGPDLASVEHAAKSVDAYVAAAPIKAGAVEA
AVTKTLECPPHLLDVLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRS
VDLAYTSVQATIHAAIHGGLGLRVNTPESLGPHGGAGYFSSGGGGGGAAR
STGGLSPLEGMGGGAASGAGMQMLPTHVSEFRPMDVPEYRSVGSWQQQQQ
QHDLHAHAQMQRHHNHRGGDGRGSDTDESEIETLSFGSIGARTPVSSAAG
SPRVGASYNTSPALSGTASTPGGDWSLFSGGFRLGVNALQEDSSCSSTPT
TARATPRVHFPEGLQALSGNDVAGAEGGDAQGDDGEDQKETADDAGKSGG
AAAAVGGLAGAHAPPPSPASTTSGEPSRKVRGPLAGAYAVDALESGDGED
SETEGEDIADKVARLGKRLQAMGLGKYCPKFAENEVDLEALGLMSESDLA
DIGIPKGPRLKILNAVGNRGGLNHTDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR001660SAM
IPR004088KH_dom_type_1
IPR013761SAM/pointed_sf
IPR036612KH_dom_type_1_sf