prot_S-dermatodea_contig1055.385.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1055.385.1
Unique Nameprot_S-dermatodea_contig1055.385.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length524
Homology
BLAST of mRNA_S-dermatodea_contig1055.385.1 vs. uniprot
Match: A0A6H5JGV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV5_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 1.410e-138
Identity = 260/552 (47.10%), Postives = 336/552 (60.87%), Query Frame = 0
Query:    1 MQRCNFHITAAEVGDAADLESLYDLTDWVYESIDAAGPTALPKLLDADVIGIALRGAGSPDPDISTLCHEMLNVLSSNEHVAAMMAKDPSVRAVLVDEVRRQLSGWKTTASGEDND-TAEEDLDYGSDGDSEAREVDGAAREDPPGTIVLDPFYAALTLRTLNNVMRASR-----------------AGTKTPESSTDLFSSTIISDSERRLKIPWPVRLLYGGNDY----------GEAESD----GAAGEVS-EWPLELKLVGDIAELMLSV-SVRGDQG----GELDEVGQMDARHALQGLEAAAASVLRETSSHPQLVDLLMRRRPLFALVTLSWKGQSVKAEDWAAEATLNVCAAYRRLYSVPEPVDKMASHNVVSVLTSWSKRLLAEEKAGIEAVELGPGHEDRAFVLQAR--AIPPLALSDPLLTITASAVVGLS-GIAWGTIRRWVAWRRAGETFAAISRFALPRALLWAGLRAGLGATALTATHGPFGFRSQMRYRTLDATSGNRGTLTMSGVRELADLGYLYLILRLCPYSLLPAFVLNSML 511
            +QRCNFHI  A +G+A +L SL +L D V+ S+ A GPTALPKLLDA VIGIALRGA SP+  ++ +C+ +L VLS N HVA  M++DP++RAVL+ E+RRQ+ GW    SG D+D  AE +      G ++  E   AA   PP TIV+DP +  LTL TL+NVMRASR                 AG      +  +      +  +   ++PWP R LYG N+Y          G  + D       G +S  WPL+ KLV DIAELMLS  S R  +G    GE  E+G++        LEAAAAS L E S HP+LV LL+RRRPL  LV +S    S+ A   ++EATLN+C AYRR + +PE  +  AS+  +    +W  + LA+E A   + +L     D+AFV QA    +PPL  S  L+    SA VG++ G  WG  RRW+AWRRAGETF+ +S  +LP  LL AGLRAGLGATAL ATHGP GFR Q     LDATSG+RGTL MS  REL++L YLY ILRLCPYSLLP+ V+++++
Sbjct:  131 VQRCNFHIATATIGEAVNLTSLLELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVAVVCYRILTVLSQNRHVARRMSRDPAIRAVLIGELRRQVKGWNHAGSGADDDHEAEGEKQQRMGGLADGGEGATAAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSKRRSTAEEPGAAGLNRRFGAGGVSGGRTAAGEDEEDEVPWPFRFLYGENNYEGAAGYAYGGGNEDDDTIIASVGGGISGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEV--------LEAAAASSLLEISHHPELVGLLLRRRPLAGLVAVSQ--DSMMAAQTSSEATLNICNAYRRCHGLPEASEPKASYEEI---ITWVNKTLAQEWAESPSGDLDTSEADQAFVRQAERSTLPPLPYSSVLINEIMSAGVGMALGFPWGAARRWIAWRRAGETFSVLSTCSLPWVLLRAGLRAGLGATALVATHGPAGFRPQASSWILDATSGSRGTLAMSAARELSELAYLYAILRLCPYSLLPSLVVSAVV 669          
BLAST of mRNA_S-dermatodea_contig1055.385.1 vs. uniprot
Match: D7G608_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G608_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 7.350e-110
Identity = 223/482 (46.27%), Postives = 288/482 (59.75%), Query Frame = 0
Query:   85 MAKDPSVRAVLVDEVRRQLSGWKTTASGEDND-TAEEDLDYGSDGDSEAREVDGAAREDPPGTIVLDPFYAALTLRTLNNVMRASR---------AGTKTPESS---------TDLFSSTIISDSERRLKIPWPVRLLYGGNDY----GEAESDG----------AAGEVS-EWPLELKLVGDIAELMLSV-SVRGDQG----GELDEVGQMDARHALQGLEAAAASVLRETSSHPQLVDLLMRRRPLFALVTLSWKGQSVKAEDWAAEATLNVCAAYRRLYSVPEPVDKMASHNVVSVLTSWSKRLLAEEKAGIEAVELGPGHEDRAFVLQAR--AIPPLALSDPLLTITASAVVGLS-GIAWGTIRRWVAWRRAGETFAAISRFALPRALLWAGLRAGLGATALTATHGPFGFRSQMRYRTLDATSGNRGTLTMSGVRELADLGYLYLILRLCPYSLLPAFVLNSMLKGGPVAG---DAW 521
            M++DP +RAVLV E+RRQ+ GW    SG D+D  AE +     DG ++  E   AA   PP TIV+DP +  LTL TL+NVMRASR         +  + PE++               T ++  +   ++PWP R LYG N+Y    G A   G            G VS  WPL+ KLV DIAELMLS  S R  +G    GE  E+G++        LEAAAAS LRE S H +LV LL+RRRPL  LV +S    S+ A   ++EATLN+C AYRR + +PE  +  AS++ V    +W  + LA+E AG  + +L     D+AFV QA    +PP   S  L+ +  S  VG++ G+ WG  RRW+AWRRAGETF+A+SR +LPRALL AGLRAGLG TAL ATHGP GFR Q R   LDATSG+RGTL MS  RE+++L YLY ILRLCPYSLLP+ V+++++  G   G   D W
Sbjct:    1 MSRDPVIRAVLVGELRRQVKGWNHAGSGADDDHEAEGEKQQRRDGLADGGEGATAAARPPPATIVVDPIHLTLTLETLSNVMRASRRDINSSRRRSTAEEPEAAGLNWRFGAGVGSGGRTAVAGEDEEDEVPWPFRFLYGENNYEGAAGYAHDGGNEDDDTITPSVGGVVSGPWPLDRKLVADIAELMLSAASARDSEGAVARGEDAELGEV--------LEAAAASSLREISHHSELVGLLLRRRPLVGLVAVSQ--DSMMAAQASSEATLNICNAYRRCHGLPEASEPKASYDEV---ITWVNKTLAQEWAGSPSGDLDTSEADQAFVRQAERSTLPPSPYSSVLINMQMSTGVGMALGVPWGAARRWIAWRRAGETFSALSRLSLPRALLLAGLRAGLGTTALVATHGPAGFRPQARPWILDATSGSRGTLAMSAAREVSELAYLYAILRLCPYSLLPSLVVSAVVWNGHRYGGVVDDW 469          
BLAST of mRNA_S-dermatodea_contig1055.385.1 vs. uniprot
Match: D7G609_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G609_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.360e-15
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    1 MQRCNFHITAAEVGDAADLESLYDLTDWVYESIDAAGPTALPKLLDADVIGIALRGAGSPDPDISTLC 68
            +QRCNFHI  A VG+A +L SL +L D V+ S+ A GPTALPKLLDA VIGIALRGA SP+  +S  C
Sbjct:  166 VQRCNFHIATATVGEAVNLTSLQELLDLVHHSVLAVGPTALPKLLDAGVIGIALRGAESPNTHVSKGC 233          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1055.385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGV5_9PHAE1.410e-13847.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G608_ECTSI7.350e-11046.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G609_ECTSI1.360e-1563.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 390..409
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 410..523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1055contigS-dermatodea_contig1055:11762..16298 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1055.385.1mRNA_S-dermatodea_contig1055.385.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1055 11642..17135 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1055.385.1 ID=prot_S-dermatodea_contig1055.385.1|Name=mRNA_S-dermatodea_contig1055.385.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=524bp
MQRCNFHITAAEVGDAADLESLYDLTDWVYESIDAAGPTALPKLLDADVI
GIALRGAGSPDPDISTLCHEMLNVLSSNEHVAAMMAKDPSVRAVLVDEVR
RQLSGWKTTASGEDNDTAEEDLDYGSDGDSEAREVDGAAREDPPGTIVLD
PFYAALTLRTLNNVMRASRAGTKTPESSTDLFSSTIISDSERRLKIPWPV
RLLYGGNDYGEAESDGAAGEVSEWPLELKLVGDIAELMLSVSVRGDQGGE
LDEVGQMDARHALQGLEAAAASVLRETSSHPQLVDLLMRRRPLFALVTLS
WKGQSVKAEDWAAEATLNVCAAYRRLYSVPEPVDKMASHNVVSVLTSWSK
RLLAEEKAGIEAVELGPGHEDRAFVLQARAIPPLALSDPLLTITASAVVG
LSGIAWGTIRRWVAWRRAGETFAAISRFALPRALLWAGLRAGLGATALTA
THGPFGFRSQMRYRTLDATSGNRGTLTMSGVRELADLGYLYLILRLCPYS
LLPAFVLNSMLKGGPVAGDAWTG*
back to top