mRNA_S-dermatodea_contig10512.364.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_S-dermatodea_contig10512.364.1
Unique Name	mRNA_S-dermatodea_contig10512.364.1
Type	mRNA
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)

Homology

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: D8LRJ6_ECTSI (Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ6_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 1.860e-104
Identity = 164/211 (77.73%), Postives = 179/211 (84.83%), Query Frame = 1

Query:    1 HTRRVRSLTCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAALLREGRQMEAPPFNVGSMLSKEFGDREGWAGVLAEASKLAQELDSVLPYRVEKEKLIAVNKKLKKHALWSEKRGGGXXXXXXXXXXXKKIKTEA 633
            H  ++  LTCVFLASKTEEQ+TNV+LLAKATG DDLQILGKEL LLQGLSFHLAVFHPYRALPALVEGAR KAK EGIPPQ ERI+ALHDGARAALDDI+VTDLPFLHPPSRLALAALLRE R+MEAPPF++ ++L KEFGDREGW  VL EA +LA ELD +LPYRVEK+KLIAVNKKLKKHA WS+KRG             KKIKTEA
Sbjct:  168 HDPKILILTCVFLASKTEEQMTNVNLLAKATGLDDLQILGKELTLLQGLSFHLAVFHPYRALPALVEGARLKAKTEGIPPQPERIMALHDGARAALDDIVVTDLPFLHPPSRLALAALLRESRRMEAPPFDLPALLGKEFGDREGWKDVLREAQRLALELDEILPYRVEKDKLIAVNKKLKKHAWWSQKRGRAEGGGGRERRKSKKIKTEA 378

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: F0W4T4_9STRA (CyclinH putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4T4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.740e-15
Identity = 43/110 (39.09%), Postives = 72/110 (65.45%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A+K EEQ  +V  +A+    D   ++G E++LL+G+ FHL ++HP+R L A V+  R  AKA+G     E + +LH  A + ++++L+TD   L+ P++LALAAL
Sbjct:  157 TVIYVAAKVEEQYISVETIAEQLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLAFVDDLRIYAKAQGKQLSLELLQSLHTKANSVVNELLLTDATLLYHPAQLALAAL 266

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A024GEU2_9STRA (CYCLIN domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GEU2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.430e-15
Identity = 43/110 (39.09%), Postives = 70/110 (63.64%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A+K EEQ  +V  +A+    D   ++G E++LL+G+ FHL ++HP+R L   V+  R  AKA+G     E +  LH  A   +++ L+TD+P L+ P++LALAAL
Sbjct:  167 TVIYVAAKVEEQYISVETIAEHLKVDHKHVIGHEMILLEGVRFHLIMYHPFRPLLGFVDDLRLYAKAKGKQLPLELLQILHTKASVVVNEFLLTDVPLLYHPAQLALAAL 276

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A8K1C540_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C540_PYTOL)

HSP 1 Score: 80.5 bits (197), Expect = 3.600e-14
Identity = 48/141 (34.04%), Postives = 79/141 (56.03%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL--LREGRQMEAPPFNVGSMLSKEFGDREGWA 441
            T +++A K EEQ  NV  +A     D   ++  E++LL+G+ F L ++HP+RAL   V+  R  +KA+G     E +  LH  +   ++++L+T+LP +H P+ LALAAL  + E  + E P   V    + E+  R  +A
Sbjct:  174 TAIYVAGKVEEQYINVDTIADQLKVDHKHVIDHEMILLEGVRFQLIMYHPFRALLGFVDDFRGFSKAQGRDLPLEALQKLHANSCVVVNELLLTELPLVHYPAYLALAALCHVAEELERETPALKVTKADALEYIKRSKFA 314

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A662YDE0_9STRA (CYCLIN domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDE0_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.920e-13
Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   A+ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  164 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMVLLEGVRFQLIMYHPFRALLGFLDDFRVFAKQALAKELP--ANVLQKLHANSSALLNDLLLTDLPLLHYPSYLALAAL 274

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: G4ZND2_PHYSP (CYCLIN domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZND2_PHYSP)

HSP 1 Score: 76.3 bits (186), Expect = 1.090e-12
Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK       +  +L  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLKKDLAATVLQKLHANSTALLNDLLLTDLPLLHYPSYLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A484DTU7_BRELC (CYCLIN domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTU7_BRELC)

HSP 1 Score: 75.9 bits (185), Expect = 1.430e-12
Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAE-GIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D  +I+G E++LL+G+ F L +++P+RAL   ++  R  AK    I   +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  165 TAIYVAGKVEEQYISVDTVADQLQVDHKEIIGHEMILLEGVRFQLIMYYPFRALLGFLDDFRAFAKKVLKIDLPATVLQKLHSNSTAILNDMLLTDLPLLHYPSYLALAAL 275

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A3M6VVK4_9STRA (CYCLIN domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVK4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.460e-12
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   ++ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYISVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLSKDLP--ATVLQKLHANSTALLNDMLLTDLPLLHYPSYLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: H3GBD3_PHYRM (CYCLIN domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBD3_PHYRM)

HSP 1 Score: 75.5 bits (184), Expect = 2.030e-12
Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAK---AEGIPPQSERILALHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+RAL   ++  R  AK   ++ +P  +  +  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRALLGFLDDFRAFAKQVLSKDLP--ATVLQKLHANSTALLNDMLLTDLPLLHYPSVLALAAL 273

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BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Match: A0A329SQ23_9STRA (CYCLIN domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A329SQ23_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 9.420e-12
Identity = 45/111 (40.54%), Postives = 65/111 (58.56%), Query Frame = 1

Query:   25 TCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLSFHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILA-LHDGARAALDDILVTDLPFLHPPSRLALAAL 354
            T +++A K EEQ  +V  +A     D   I+G E++LL+G+ F L ++HP+R L   ++  R  AK          +L  LH  + A L+D+L+TDLP LH PS LALAAL
Sbjct:  163 TAIYVAGKVEEQYMSVDTVADQLHVDHKFIIGHEMILLEGVRFQLIMYHPFRTLLGFLDDFRAFAKQVLKKDLPATVLQKLHANSTAILNDMLLTDLPLLHYPSYLALAAL 273

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig10512.364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LRJ6_ECTSI	1.860e-104	77.73	Cyclin H n=1 Tax=Ectocarpus siliculosus TaxID=2880...	[more]
F0W4T4_9STRA	2.740e-15	39.09	CyclinH putative n=1 Tax=Albugo laibachii Nc14 Tax...	[more]
A0A024GEU2_9STRA	5.430e-15	39.09	CYCLIN domain-containing protein n=1 Tax=Albugo ca...	[more]
A0A8K1C540_PYTOL	3.600e-14	34.04	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A662YDE0_9STRA	5.920e-13	41.59	CYCLIN domain-containing protein n=1 Tax=Nothophyt...	[more]
G4ZND2_PHYSP	1.090e-12	41.44	CYCLIN domain-containing protein n=5 Tax=Phytophth...	[more]
A0A484DTU7_BRELC	1.430e-12	40.54	CYCLIN domain-containing protein n=1 Tax=Bremia la...	[more]
A0A3M6VVK4_9STRA	1.460e-12	40.71	CYCLIN domain-containing protein n=1 Tax=Peronospo...	[more]
H3GBD3_PHYRM	2.030e-12	40.71	CYCLIN domain-containing protein n=1 Tax=Phytophth...	[more]
A0A329SQ23_9STRA	9.420e-12	40.54	CYCLIN domain-containing protein n=10 Tax=Phytopht...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig10512	contig	S-dermatodea_contig10512:1564..8016 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	84.3
Seed ortholog evalue	7.3e-14
Seed eggNOG ortholog	653948.CCA16120
Preferred name	CCNH
KEGG ko	ko:K02725,ko:K06634
KEGG Pathway	ko03022,ko03050,ko03420,ko04110,map03022,map03050,map03420,map04110
KEGG Module	M00290,M00337,M00340
GOs	GO:0000079,GO:0000307,GO:0000428,GO:0001101,GO:0001932,GO:0001934,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004693,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005675,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006294,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009414,GO:0009415,GO:0009416,GO:0009452,GO:0009628,GO:0009637,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010035,GO:0010118,GO:0010119,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016071,GO:0016301,GO:0016310,GO:0016538,GO:0016591,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019887,GO:0019907,GO:0019908,GO:0019914,GO:0022607,GO:0030234,GO:0030295,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031647,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032774,GO:0032806,GO:0032991,GO:0033554,GO:0033674,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0036260,GO:0042221,GO:0042325,GO:0042327,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043539,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045737,GO:0045787,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045937,GO:0045944,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0061575,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070816,GO:0070985,GO:0071704,GO:0071824,GO:0071840,GO:0071900,GO:0071902,GO:0072593,GO:0080090,GO:0080134,GO:0090304,GO:0090575,GO:0097472,GO:0097659,GO:0098772,GO:0140096,GO:0150005,GO:1901360,GO:1901362,GO:1901407,GO:1901409,GO:1901564,GO:1901576,GO:1901700,GO:1902494,GO:1902554,GO:1902680,GO:1902911,GO:1903506,GO:1903508,GO:1904029,GO:1904031,GO:1990069,GO:1990234,GO:2000070,GO:2000112,GO:2001141
EggNOG free text desc.	positive regulation of phosphorylation of RNA polymerase II C-terminal domain
EggNOG OGs	COG5333@1,KOG2496@2759
Ec32 ortholog description	cyclin H
Ec32 ortholog	Ec-12_000030.2
EC	3.4.25.1
COG Functional cat.	DKL
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko01000,ko01002,ko03021,ko03051,ko03400,ko04147
Hectar predicted targeting category	other localisation
Exons	5
Model size	636
Cds size	636
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig10512.364.1	prot_S-dermatodea_contig10512.364.1	Saccorhiza dermatodea SderLu1190fm monoicous	polypeptide	S-dermatodea_contig10512 1564..8016 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622924160.994143-CDS-S-dermatodea_contig10512:1563..1707	1622924160.994143-CDS-S-dermatodea_contig10512:1563..1707	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 1564..1707 -
1694079059.3486435-CDS-S-dermatodea_contig10512:1563..1707	1694079059.3486435-CDS-S-dermatodea_contig10512:1563..1707	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 1564..1707 -
1622924161.0050235-CDS-S-dermatodea_contig10512:3469..3597	1622924161.0050235-CDS-S-dermatodea_contig10512:3469..3597	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 3470..3597 -
1694079059.3634498-CDS-S-dermatodea_contig10512:3469..3597	1694079059.3634498-CDS-S-dermatodea_contig10512:3469..3597	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 3470..3597 -
1622924161.0133078-CDS-S-dermatodea_contig10512:4285..4349	1622924161.0133078-CDS-S-dermatodea_contig10512:4285..4349	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 4286..4349 -
1694079059.3769755-CDS-S-dermatodea_contig10512:4285..4349	1694079059.3769755-CDS-S-dermatodea_contig10512:4285..4349	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 4286..4349 -
1622924161.023449-CDS-S-dermatodea_contig10512:7522..7681	1622924161.023449-CDS-S-dermatodea_contig10512:7522..7681	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 7523..7681 -
1694079059.3938775-CDS-S-dermatodea_contig10512:7522..7681	1694079059.3938775-CDS-S-dermatodea_contig10512:7522..7681	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 7523..7681 -
1622924161.0335276-CDS-S-dermatodea_contig10512:7875..8016	1622924161.0335276-CDS-S-dermatodea_contig10512:7875..8016	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 7876..8016 -
1694079059.4041102-CDS-S-dermatodea_contig10512:7875..8016	1694079059.4041102-CDS-S-dermatodea_contig10512:7875..8016	Saccorhiza dermatodea SderLu1190fm monoicous	CDS	S-dermatodea_contig10512 7876..8016 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at S-dermatodea_contig10512:1564..8016-
coding sequence from alignment at S-dermatodea_contig10512:1564..8016-

protein sequence of mRNA_S-dermatodea_contig10512.364.1

>prot_S-dermatodea_contig10512.364.1 ID=prot_S-dermatodea_contig10512.364.1|Name=mRNA_S-dermatodea_contig10512.364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=212bp
HTRRVRSLTCVFLASKTEEQITNVSLLAKATGRDDLQILGKELMLLQGLS
FHLAVFHPYRALPALVEGARQKAKAEGIPPQSERILALHDGARAALDDIL
VTDLPFLHPPSRLALAALLREGRQMEAPPFNVGSMLSKEFGDREGWAGVL
AEASKLAQELDSVLPYRVEKEKLIAVNKKLKKHALWSEKRGGGGEGDGGQ
RRKRKKIKTEA*

mRNA from alignment at S-dermatodea_contig10512:1564..8016-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_S-dermatodea_contig10512.364.1 ID=mRNA_S-dermatodea_contig10512.364.1|Name=mRNA_S-dermatodea_contig10512.364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6453bp|location=Sequence derived from alignment at S-dermatodea_contig10512:1564..8016- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACACTCGCCGCGTGCGAAGCCTAACGTGCGTATTTTTGGCTAGCAAGAC
CGAAGAGCAGATAACCAACGTGAGCCTCCTCGCGAAGGCAACGGGTCGGG
ACGACCTTCAGATCCTTGGCAAGGAGCTCATGTTGTTACAGGTGACAAAT
TATATGAACTGGCCTCCGTTTGGTCTAAAAAAAGGTAGGCACATTGAATA
CAAACAGTTATTATAGTTCCAATAGGGTTTATAAGCAAATACAGTACCCT
GGTCGATTCCCGCTTGGCCCTGTTTTGCTCCGATTGTGATGTGGCCCGCG
CGCGAACTGCCTCGGGGACCCCTCCACTCCCGCAGGGGCTTAGCTTCCAC
CTCGCCGTTTTCCACCCGTATCGGGCGCTGCCGGCTCTGGTGGAGGGGGC
GCGACAGAAAGCCAAAGCGGAAGGGATTCCGCCGCAGTCGGAGAGGATAT
TGGCGCTGCACGACGGTGCCAGAGCAGCTCTTGACGACATTCTGGTGAGA
GAGAGAGAGAAACGTTCGGAGATTGCGGAGATCTCACATGAATGAATCAA
GCACGCATTGCAGCCATGTCATACGCGTACAACAGACAATCGAAGTAGTA
GTATACGATGATACTTCTGTCTGTACGTTTTTTTGTTTGAAGCTCGCGCG
CGCGAGCTCACAAAAGGCGGGGGACGCGACACAGCGCGACGCGACGTGGA
CGACACGACCGGTGCACTTGGCTTCTTATATTCTATTACCGGGGACCTAG
TTAGCAGGTCCAAATTTGCCTTTAAGTCTCAACCTATAAAAAAACAAAAT
ATGCTAAAATTCTTGAGATTTCAAGGTCGATGTTCTTACAATATGTATGG
CCAAATCTCGTGTCCTTTTTTTTTTCCATGAGATTTTTTGTTGTTTGGGT
ATTTGTTTTTATTTATGAGTTGTCATGTCGGAAGAGTTGGGTAGTCATGG
TCGTGAGGTTTGGTCCTAATTACTTGATTATAGTGTACCTCCGTAGTAGG
GGGTAGCCACGGCTACGCCGGTGAGGTGTGCGTTGTCGGCAGGCGATACT
GTATGTATTTGGGTGTGGAAAATCAGGCCACTCAGCACTCTGAAAAGGAC
TACCCTACAACCCTATTATCAAAACTTCACACAAGTAGGTCTTAGAGGCT
ACGCTCTTCTCCGTATATCGGCCTCAAATTTTTGCATCGGGGCTCTACTC
GAAATTCTAAGGAAACACACAACACAACACACGTGCGAAGCGCTATAATA
GTAATTATTTTTAAAGATATGTATGTGTGGACGCGGCGGTCGAGGAGGAC
GCGAGGGTCCGTGGGACGAAGTCAGTCCCGAGGCGTGGTTTCTTGTTTCT
TTCTTTGGTCTTGGTAGCGAGGAGACTAGACTCGCTGGGTCACTGCTGTT
GGTCTCGCAGTCCGTGGGTTGAGCAAGCCTTGACGCTCCGTTCTTGATCA
TGGTTCCGTCGGTCGTTGATGCTCCTTCCGTCGGTAATGGAAACCCCCAG
GATGGATGTGTAGACTGGGGACACGTATGGGTCTAGGAAATGTGCTCTCC
ACATATATAAATATGTATATGTTAATACTTGTATTATATGCACATTAGAG
TAGCACGCTATGCGTGCGGTTCCCCAGTGGAGTCGTTTTTTTTTAAACCC
GTTACGGTTGTATGAATGAAGTACATGCCAAAGGGTAGGATTGTTGATTA
CCGTGAGTATTAGTATTTATGCACAACATGCTTGCAAGTACTTGTAGGAG
GGGCGTGTTATTGGCTGTATGCTACGATACTGTAGTAGATAGACAGACCG
CATGTATGTGCGTGGTTGACCGATGACGGTCGCGGTGGAGGCCGACTCCT
TGCTGAGCCGCCGTCAGGCCATGCCCGAGGTGAGCTTTAACCAAGCTCAG
ATGAACGAACGGTTTGTTTTTTTGTTCAAAGATACTGATCGCTCCTGCGG
TAGTTAGGTAGATGGATCGGTGAAGCAGGTGCGATCGAGTGGCGGTGGAC
CGCAACAATACACTTGAACTCAGGTATAATACTAAAATAGTGTTTTACAG
GTCGGGGTCCCGTTATCAGTTGCCGAGGGGCACAACCCCGAGGGTCAAGA
CAAACAACAGAGTAGAAATAACAAACAAGCCACATGTCAACGACCCTGAG
CTCTAAAATTTTATGTACGACGACAAAACACACATGGAAGAGTTCGTTCC
CATATGATGTAGATAGTCAAACACGACCGATAGTTCGTTGTCGATTGATT
CCCTTTGGGCGGGTGGAGGGGGGACCCCTAGGCGGGAGGTTCGAGCTTGC
AGTCGCCCCCATACGGAACGAGCGACGTCTGGGCAGCAAACCCAAACTTC
GAAAGCACCATCTTATCAACAGGCGAGCCTTCTCTTGAGGATACTCGGTA
GTTGGGCATCACGGCGGGCCCCGAGCTCGCAATTGTCAACCAGCTACCAG
CACGGGGCGTTCTCCGGAAGATCCTCCGCGCTCATCAAGGTGCCGCAACT
ACACCTGGCGGTGGCAGGCAGTCACAGACGACACAGGGAAACCTGCCAAG
GGAATATTGGAGGGAGCAAGAGGGCGACGGACGCACTTCCGCCTGCTAGC
GGGGTTCAAGGCTGTTGTCGAGGAAATTATATGCGGCATATAATTTAGTA
CTTACCCTGGTAGTATTTAAGTATGCTTAACCCTTTTGGTACTAGCCCCT
AATACTAATACTGTTTGGAGTGCCTGTTAGCACGTAATGAGGCGTGCTTG
AAGCGGGGCCTTGGGGAACTCCATGGATTATGACGCATGAATGAGAGAGA
ACGGAGCGCAAGAGAAACGGGGCTGTAGCTGTCGCCTGGCACCGAGAGAG
GTTTTGGTCGTTTCCGAAAGCCCTATTGATTTATTAATTCTAATTTATTA
GTACCAAAAGGGTTAAGAAGGGGGATCCCCTGCACATTCCAACACGGTTC
TAAAGGTGGCAAGGCATAAACGGGGGTTGGGTCGGTCGGTCATGTTGAAA
GAGCAAAGTGCGGTACAAGTGCGGCGCTTCTTGTTTCAACAGTTACCTCT
CCCCAGTTCGATACCCTGCATTTGCCGCCACAGCCCTCTTCTCGCGGACT
AGAGCTAGTCGTATCTCCCTCAGCTGCCCTCGGGAGTTTACCGCCAGTCT
GCAACACAGCCGCCATTCAGCCCGTACACAAACAACCAAGGAAACTTTGA
GGGAGTGAGGTGGTTGCAAAACTTGCGTGTAACGTCGTGCGTCTCGAAAG
TAATGGCGTTCTCGTGCTACTATCGTAGGAGCTTATGTATTAACTAGTGG
GTAGCCACGGCTACGCCCGTGTGAGGTGTGCGTTTGCAGGACGACATGCC
GACGGAACGCGACACGGAGGTCGAACGCGGTCGAGCTACTGCTGTGCGTG
CCGCTGCTGTGCGTGTGTCGCTGCTGTGTTTTCTCGCTTTATAAAAACAA
AATCGCTCAACACAAACATCAAGGTGTTTGGCATCGGACAGCATCCTTGT
CTGAAATCAATATACACTGTACACAATCGGTCATTGTTGCATTAATTAAT
AAGATACTTGTATTTAATGTACATATACTTATATGTGCATGTATATATTA
GCACTCCATCCACCCTCCTTGCCCTTCTCTTTGCGCGTGCCCGTCGCGAC
CCGTGTTCGTCCTCCAGGTGACAGATCTGCCATTCCTCCACCCGCCCTCC
CGGTTAGCCTTGGCTGCCCTGCTTCGAGAAGGTACTTGTACTACAGTGTA
CTCTAATACAGCATGGCATTTGCTTTTGTGTTCAGCAAAGCCCACGCGCG
GGTCCTGCTGTCCCGATGCGTTTGTGGTATTGTATTGTATCATACACTTT
ATGTGTTGTGTTTACGTATTTTTAACAAAAAGTACCAGTATATATGTACT
TCGAACTATATATATAATGATACAGATATTTTTACATTTGATTGATTGCT
TGATTGCTTGATTGCTTGATTTGATTAATTTTGTTGATTTTATCACACTT
TTCAAACGACCGGCCTATATACCAATTGGTTGCCGACCCCGCTCGGTCGT
GGTGTGGTCAGATGACAAACAAACAAAGAGAGATTGAAAAACAAAAGAAA
AAAAAACTTGTACTTGTACGGAATTACCTGCAGTAGCGACCGTTGGGGTC
CAACCTTGTTGTTGCGGAGAGGAGGAAAATTCATGCATAACATTTTTTGC
GCCACCTTTGGTACAGTAGGAAGGAACGATATCGCTATCGCCGATCGATC
GATCGATCGATCGATCCTGAGGGAACAACGCTCCGTCCTCTCGAGGACAG
ACGCGTGGTCAATGATCTAACAGCTAAGGCATGCAAAACTTGAGTACCCC
GCCCCGCCCCCCGTCCCGTCCCTCTCCGTTCCCTCCGCGATCTTCTTATC
GTCTCTTGGTACGTCGCAGGGCGACAAATGGAAGCTCCCCCTTTCAACGT
GGGCTCGATGCTGAGCAAGGAGTTCGGAGATAGGGAGGGCTGGGCGGGCG
TGTTGGCGGAGGCGAGCAAGCTTGCGCAGGAGTTGGACTCCGTGCTGGTG
AGAGAGGGGGGGCGGGGGGGTACTCATGTTTTGCATGCCTTAGCTGTTAG
GCCATTGACCACGCGTCTGTCCTCGAGAGGACGGAGCATTGTTCCCACAG
GATCGATCGATCTATCGCCGATGGCCAAACGTTCCTTTCTGCTCTGCCAA
AGGTGGCGCAATTATTTTTTGTTTCCTATCCTGCCTACACCCCTTCTCTC
TTCTCAGCCTACTTATTTTCTCCCACTTAAATAGCTACCGCCTTCGTCTG
GCTGTCCCATGGTTCAAAAGTCTCTTCTGTCACAGCCTTCAATTTTCCCC
GGCTCAGCCATGCACACGTCTCTCTCCTTTTCATAGAACGGGCGTTCCGC
CACTGCATGGACACGGTCTTCATCAAGGCGGGGGGGGGGCGAATAGCGAA
TAGAAAGCTGTTGCAGGCGATTTATCGGAATCTCGTCTGACCACGAGCGG
GATGGGCGACCGACTATTGGGCGGATCGGTCGGCCGGGTGTGACAAATAA
AATAATTAAATAAATATACAAATCACAAGCAACGGGTTGGAACCACCCGT
TTTATTTTTATTTGTTTAATCAAAAAAATTATTTTGTTTGTTTGTATATT
ACAATTTTACTGTTAATACTGATTGTGCGTAAATAAACCAGGGGCGGGGG
GGGAGGGGTTGGAACCGCCCGTTTTTTGTTTTGTTTTTTGTTTCAAACAT
GCGATAGTTGTTCGTATAATTATTGCGACAGTTTCCTGTAAACCAGGGGG
TCAGGCGCTCCGCCGGGCGGCATACGGGTTACCGTATATCCCTTGTCATG
TCGTTTGGACATCAGCTTTTTTGTTCGATGTGTAGGGGTGCTGGATTTCA
ATTGCTCTTCTTGTGCCTTCATGTGACCACACGAACGAGCGGGATCAGCA
TCCAATTTCGCAATTGCAAAAATGGCGGGCCGGTCGGTTGCATGTGTGAC
GATCAATCAACCAATCAATCAATCAATCAATCAATAGTACGATTTTTCTG
CATCGTAAGTACGCAAGGATTTATAACCGCCCGCATATACAAAGACAGGC
GACTCTCTGTGCTGTGTTATTCTGTTTGGACGACCCCCGAACCCCGAACC
CCGAACCTCAAACATCCGCGCGATTCTCGCCACAACAGCCGTGTGATTGA
TTGGTTGGTCGATTGATTTACACACGTATATACAACCGCGCGCCCCGTGG
TTGAACTGTTTGACCAACAGCCCAGTAGGCGGAGGACCCGGTTTCAAAAT
CCCGGCAGAGTCGACATTTATTTATTTATTTGCTCTACCTCCGCCGCGGA
AAGCGCGAGAGCGTGAGTAAGCAAAGCAAAATCCGAGAATTCGGCGAGCT
GTGGGAGTGCCGAAGCCAATGCATTCGCGATAAATATCAAAGGTGAGAAC
ATACCGGGGATAAGATAAGAGAGATGGGATCATCCCTTGTGACCACAGAC
GGACCTACCTCGGAAAAGCAAGTCTATCATTGTGTGCCAACAACAACAAA
GCAACAGCAATAACAACAACAATCCGGAACATATTGATTGTTTGAACCTG
GTAAACTCGGAACGGGATAATCTCAGATGGGCTACTGGCCAATGAGGCGC
GATTCGCTCGCGTAAAATGGAAACACGCCTTCTACGTTCTGGTCGACAGA
CAAACACCGATTTTGTTATGTACCCCGCCCCCCCCCCCCTGTCGTTGGAT
CACTCTTACTTCTTTCTCTTCCTCCTCCTCCTGTGGCCGACTTTTTTTTA
TTGTCACAGCCGTACCGAGTGGAGAAGGAAAAGCTGATCGCCGTCAACAA
GAAGCTCAAGAAGCACGCCTTGTGGTCGGAGAAGCGCGGCGGCGGCGGGG
AGGGCGACGGCGGCCAACGGCGCAAGCGAAAAAAAATCAAGACTGAGGCG
TGA

Coding sequence (CDS) from alignment at S-dermatodea_contig10512:1564..8016-

>mRNA_S-dermatodea_contig10512.364.1 ID=mRNA_S-dermatodea_contig10512.364.1|Name=mRNA_S-dermatodea_contig10512.364.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at S-dermatodea_contig10512:1564..8016- (Saccorhiza dermatodea SderLu1190fm monoicous)
CACACTCGCCGCGTGCGAAGCCTAACGTGCGTATTTTTGGCTAGCAAGAC
CGAAGAGCAGATAACCAACGTGAGCCTCCTCGCGAAGGCAACGGGTCGGG
ACGACCTTCAGATCCTTGGCAAGGAGCTCATGTTGTTACAGCACACTCGC
CGCGTGCGAAGCCTAACGTGCGTATTTTTGGCTAGCAAGACCGAAGAGCA
GATAACCAACGTGAGCCTCCTCGCGAAGGCAACGGGTCGGGACGACCTTC
AGATCCTTGGCAAGGAGCTCATGTTGTTACAGGGGCTTAGCTTCCACCTC
GCCGTTTTCCACCCGTATCGGGCGCTGCCGGCTCTGGTGGAGGGGGCGCG
ACAGAAAGCCAAAGCGGAAGGGATTCCGCCGCAGTCGGAGAGGATATTGG
CGCTGCACGACGGTGCCAGAGCAGCTCTTGACGACATTCTGGGGCTTAGC
TTCCACCTCGCCGTTTTCCACCCGTATCGGGCGCTGCCGGCTCTGGTGGA
GGGGGCGCGACAGAAAGCCAAAGCGGAAGGGATTCCGCCGCAGTCGGAGA
GGATATTGGCGCTGCACGACGGTGCCAGAGCAGCTCTTGACGACATTCTG
GTGACAGATCTGCCATTCCTCCACCCGCCCTCCCGGTTAGCCTTGGCTGC
CCTGCTTCGAGAAGGTGACAGATCTGCCATTCCTCCACCCGCCCTCCCGG
TTAGCCTTGGCTGCCCTGCTTCGAGAAGGGCGACAAATGGAAGCTCCCCC
TTTCAACGTGGGCTCGATGCTGAGCAAGGAGTTCGGAGATAGGGAGGGCT
GGGCGGGCGTGTTGGCGGAGGCGAGCAAGCTTGCGCAGGAGTTGGACTCC
GTGCTGGGCGACAAATGGAAGCTCCCCCTTTCAACGTGGGCTCGATGCTG
AGCAAGGAGTTCGGAGATAGGGAGGGCTGGGCGGGCGTGTTGGCGGAGGC
GAGCAAGCTTGCGCAGGAGTTGGACTCCGTGCTGCCGTACCGAGTGGAGA
AGGAAAAGCTGATCGCCGTCAACAAGAAGCTCAAGAAGCACGCCTTGTGG
TCGGAGAAGCGCGGCGGCGGCGGGGAGGGCGACGGCGGCCAACGGCGCAA
GCGAAAAAAAATCAAGACTGAGGCGTGACCGTACCGAGTGGAGAAGGAAA
AGCTGATCGCCGTCAACAAGAAGCTCAAGAAGCACGCCTTGTGGTCGGAG
AAGCGCGGCGGCGGCGGGGAGGGCGACGGCGGCCAACGGCGCAAGCGAAA
AAAAATCAAGACTGAGGCGTGA